Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

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The map label for this gene is yneF

Identifier: 15673293

GI number: 15673293

Start: 1345039

End: 1345575

Strand: Direct

Name: yneF

Synonym: L144693

Alternate gene names: NA

Gene position: 1345039-1345575 (Clockwise)

Preceding gene: 15673292

Following gene: 15673301

Centisome position: 56.86

GC content: 30.91

Gene sequence:

>537_bases
ATGGCAAGAGCCCAATCCAAAGAGGAATTAATTACTTTTTCTGAAGAAAGTTGGCAGAAATTATGTTCACTAATCAATTC
ATTAAACGAAGAAACAAAAAATACCAATTTTACCTTTAAAGTTGAAGATAAAAAAGAAAAACATTGGGCAAGAGATAAAA
ATCTAAGAGACGTCATGGTTCATCTCTATGAGTGGCATCAGTTATTAATCAACTTTGTCGAAAAAAATAAAAGAGGAGAG
AAAACGTCCTTTCTGCCCTCTCCTTATAATTGGAAAAATTATGGTGAAATGAATTACAATTTTCAAATAAATGGGCAAAA
AAAGTCATTATCTGAGATAACACAACAACTTTCTGAAAGCCATATGAAGGTAATCACCCTCATTGAAAATTTTTCAAACA
AAGAACTGTTCACAAAAAAATATTTTGATTGGACAGGTTCAACTAGTTTGGGGCAATATTTTCAGTCTTCTATGTCATCG
CACTATGAGTGGGCCTATAAAAAAATTAAATTACATAAAAAAACCTCAGAACTATGA

Upstream 100 bases:

>100_bases
TTTGGATTAGTAAAGCTGTCAGAAGAGCCGTCACTTGGAGAAGGAAACTCTGACTAACTATGATAGAATATTAGTAAAAT
CTAAAACAGGAGGGATTATA

Downstream 100 bases:

>100_bases
GGTTTTTTATTTTTATTATTAGTTTCTTGAGTTTAATAATTTTTGTCAGTAAATTTTACTGACAAGAACAGTCCTGACAG
TCTTCTTCACATCCGAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MARAQSKEELITFSEESWQKLCSLINSLNEETKNTNFTFKVEDKKEKHWARDKNLRDVMVHLYEWHQLLINFVEKNKRGE
KTSFLPSPYNWKNYGEMNYNFQINGQKKSLSEITQQLSESHMKVITLIENFSNKELFTKKYFDWTGSTSLGQYFQSSMSS
HYEWAYKKIKLHKKTSEL

Sequences:

>Translated_178_residues
MARAQSKEELITFSEESWQKLCSLINSLNEETKNTNFTFKVEDKKEKHWARDKNLRDVMVHLYEWHQLLINFVEKNKRGE
KTSFLPSPYNWKNYGEMNYNFQINGQKKSLSEITQQLSESHMKVITLIENFSNKELFTKKYFDWTGSTSLGQYFQSSMSS
HYEWAYKKIKLHKKTSEL
>Mature_177_residues
ARAQSKEELITFSEESWQKLCSLINSLNEETKNTNFTFKVEDKKEKHWARDKNLRDVMVHLYEWHQLLINFVEKNKRGEK
TSFLPSPYNWKNYGEMNYNFQINGQKKSLSEITQQLSESHMKVITLIENFSNKELFTKKYFDWTGSTSLGQYFQSSMSSH
YEWAYKKIKLHKKTSEL

Specific function: Unknown

COG id: COG4283

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21344; Mature: 21213

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAQSKEELITFSEESWQKLCSLINSLNEETKNTNFTFKVEDKKEKHWARDKNLRDVMV
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCHHHHHH
HLYEWHQLLINFVEKNKRGEKTSFLPSPYNWKNYGEMNYNFQINGQKKSLSEITQQLSES
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
HMKVITLIENFSNKELFTKKYFDWTGSTSLGQYFQSSMSSHYEWAYKKIKLHKKTSEL
HHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARAQSKEELITFSEESWQKLCSLINSLNEETKNTNFTFKVEDKKEKHWARDKNLRDVMV
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCHHHHHH
HLYEWHQLLINFVEKNKRGEKTSFLPSPYNWKNYGEMNYNFQINGQKKSLSEITQQLSES
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
HMKVITLIENFSNKELFTKKYFDWTGSTSLGQYFQSSMSSHYEWAYKKIKLHKKTSEL
HHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA