| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is ilvA
Identifier: 15673209
GI number: 15673209
Start: 1250814
End: 1252064
Strand: Direct
Name: ilvA
Synonym: L0081
Alternate gene names: 15673209
Gene position: 1250814-1252064 (Clockwise)
Preceding gene: 15673208
Following gene: 15673210
Centisome position: 52.88
GC content: 36.05
Gene sequence:
>1251_bases ATGATAAGTGCCAAAGAGGTTGAAGATGCCTATGATTTGTTAAAAGCAGTTGTCACTAAAACACCTTTACAATTAGACCC CTACCTTTCCAATAAATATCAAGCAAATATTTACTTAAAAGAAGAAAATTTACAGAAAGTTCGTTCTTTTAAATTACGAG GAGCTTATTATTCTATCAGTAAATTATCTGATGAGCAACGCTCTAAAGGAGTGGTTTGTGCCTCCGCAGGTAATCACGCA CAAGGAGTTGCTTTTGCTGCAAATCAATTAAATATTTCTGCGACAATTTTCATGCCCGTTACTACACCTAACCAAAAAAT TTCACAAGTTAAATTTTTTGGCGAAAGTCATGTAACAATTCGTTTAATTGGTGATACTTTTGATGAATCAGCCAGAGCAG CAAAAGCTTTTTCTCAAGATAATGACAAACCATTTATAGACCCTTTTGATGATGAAAATGTAATTGCTGGTCAAGGGACA GTGGCTTTAGAAATTTTTGCGCAAGCTAAAAAACAAGGAATAAGTTTAGATAAGATTTTTGTACAGATTGGTGGAGGTGG TTTAATTGCAGGAATTACGGCCTACAGTAAGGAGCGCTATCCCCAAACTGAAATTATTGGAGTTGAAGCAAAAGGGGCAA CAAGTATGAAAGCTGCCTACTCTGCTGGTCAGCCCGTCACCTTGGAACACATTGATAAATTTGCTGACGGAATTGCGGTT GCGACTGTTGGTCAGAAAACTTACCAACTTATTAATGACAAAGTGAAACAATTGCTTGCGGTTGATGAAGGTTTAATTTC TCAAACCATACTCGAATTGTATTCAAAATTAGGAATTGTCGCCGAACCAGCAGGTGCAACATCTGTTGCCGCACTTGAAC TTATTAAAGATGAAATCAAGGGTAAAAATATTGTCTGTATCATCAGCGGCGGAAATAATGATATTAGTCGAATGCAAGAA ATTGAAGAAAGAGCTTTGGTTTATGAAGGTCTAAAACATTATTTTGTCATTAACTTTCCTCAAAGACCAGGAGCCTTAAG AACTTTTGTCAGTGATATTTTAGGGCCAAATGATGATATTACCCGATTTGAGTACATCAAAAGGGCTGATAAAGGTAAAG GGCCTTGTCTTGTTGGGATTTTACTTTCAGATGCTAGTGATTATGATTCATTGATTGATCGGATTGAAAGATTTGATAAT CGTTATGTTAACTTACATGGAAATGATAGTTTATACGAACTTTTGGTCTAA
Upstream 100 bases:
>100_bases TTCACACAATCTGGTGATGACGATGCCTTTAAAATCTATCAGTAATTTCTCTTATTGATTGAACAAAAACATAAAAGCAT TTTATGGAGGAATGACATAA
Downstream 100 bases:
>100_bases CTAACCAATTGGTTTGAGCCATTTTCTAGTTTCAATTCTCTTTAAATCACTAGAAATTTGATATAATTTAATTAATAAAT TATTTAAATTTAATGAGATA
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MISAKEVEDAYDLLKAVVTKTPLQLDPYLSNKYQANIYLKEENLQKVRSFKLRGAYYSISKLSDEQRSKGVVCASAGNHA QGVAFAANQLNISATIFMPVTTPNQKISQVKFFGESHVTIRLIGDTFDESARAAKAFSQDNDKPFIDPFDDENVIAGQGT VALEIFAQAKKQGISLDKIFVQIGGGGLIAGITAYSKERYPQTEIIGVEAKGATSMKAAYSAGQPVTLEHIDKFADGIAV ATVGQKTYQLINDKVKQLLAVDEGLISQTILELYSKLGIVAEPAGATSVAALELIKDEIKGKNIVCIISGGNNDISRMQE IEERALVYEGLKHYFVINFPQRPGALRTFVSDILGPNDDITRFEYIKRADKGKGPCLVGILLSDASDYDSLIDRIERFDN RYVNLHGNDSLYELLV
Sequences:
>Translated_416_residues MISAKEVEDAYDLLKAVVTKTPLQLDPYLSNKYQANIYLKEENLQKVRSFKLRGAYYSISKLSDEQRSKGVVCASAGNHA QGVAFAANQLNISATIFMPVTTPNQKISQVKFFGESHVTIRLIGDTFDESARAAKAFSQDNDKPFIDPFDDENVIAGQGT VALEIFAQAKKQGISLDKIFVQIGGGGLIAGITAYSKERYPQTEIIGVEAKGATSMKAAYSAGQPVTLEHIDKFADGIAV ATVGQKTYQLINDKVKQLLAVDEGLISQTILELYSKLGIVAEPAGATSVAALELIKDEIKGKNIVCIISGGNNDISRMQE IEERALVYEGLKHYFVINFPQRPGALRTFVSDILGPNDDITRFEYIKRADKGKGPCLVGILLSDASDYDSLIDRIERFDN RYVNLHGNDSLYELLV >Mature_416_residues MISAKEVEDAYDLLKAVVTKTPLQLDPYLSNKYQANIYLKEENLQKVRSFKLRGAYYSISKLSDEQRSKGVVCASAGNHA QGVAFAANQLNISATIFMPVTTPNQKISQVKFFGESHVTIRLIGDTFDESARAAKAFSQDNDKPFIDPFDDENVIAGQGT VALEIFAQAKKQGISLDKIFVQIGGGGLIAGITAYSKERYPQTEIIGVEAKGATSMKAAYSAGQPVTLEHIDKFADGIAV ATVGQKTYQLINDKVKQLLAVDEGLISQTILELYSKLGIVAEPAGATSVAALELIKDEIKGKNIVCIISGGNNDISRMQE IEERALVYEGLKHYFVINFPQRPGALRTFVSDILGPNDDITRFEYIKRADKGKGPCLVGILLSDASDYDSLIDRIERFDN RYVNLHGNDSLYELLV
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family
Homologues:
Organism=Homo sapiens, GI11345492, Length=325, Percent_Identity=30.1538461538462, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI33469958, Length=319, Percent_Identity=28.2131661442006, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI19923959, Length=310, Percent_Identity=27.4193548387097, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1790207, Length=365, Percent_Identity=37.2602739726027, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1789505, Length=322, Percent_Identity=35.4037267080745, Blast_Score=157, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71991565, Length=341, Percent_Identity=35.4838709677419, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17537387, Length=365, Percent_Identity=31.2328767123288, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17508781, Length=318, Percent_Identity=26.7295597484277, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320930, Length=355, Percent_Identity=38.8732394366197, Blast_Score=206, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6322631, Length=312, Percent_Identity=35.5769230769231, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6319788, Length=295, Percent_Identity=28.4745762711864, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6322024, Length=188, Percent_Identity=26.5957446808511, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI21355833, Length=351, Percent_Identity=31.0541310541311, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI24645328, Length=255, Percent_Identity=27.843137254902, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): THD1_LACLA (Q02145)
Other databases:
- EMBL: U92974 - EMBL: AE005176 - PIR: C86778 - PIR: S35141 - RefSeq: NP_267383.1 - ProteinModelPortal: Q02145 - SMR: Q02145 - GeneID: 1114876 - GenomeReviews: AE005176_GR - KEGG: lla:L0081 - NMPDR: fig|272623.1.peg.1262 - HOGENOM: HBG714501 - OMA: DILMAHN - ProtClustDB: PRK08639 - BioCyc: LLAC272623:L0081-MONOMER - BRENDA: 4.3.1.19 - InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR001721 - InterPro: IPR011820 - TIGRFAMs: TIGR02079
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C; SSF53686 PyrdxlP-dep_enz_bsu
EC number: =4.3.1.19
Molecular weight: Translated: 45577; Mature: 45577
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAKEVEDAYDLLKAVVTKTPLQLDPYLSNKYQANIYLKEENLQKVRSFKLRGAYYSIS CCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEEEHHHHHHHHHHHHCCCEEEHH KLSDEQRSKGVVCASAGNHAQGVAFAANQLNISATIFMPVTTPNQKISQVKFFGESHVTI HHCCHHHHCCEEEECCCCCCCCEEEEECEEEEEEEEEEEECCCCHHHHHEEEECCCCEEE RLIGDTFDESARAAKAFSQDNDKPFIDPFDDENVIAGQGTVALEIFAQAKKQGISLDKIF EEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEHHHHHHHHHHCCCEEEEE VQIGGGGLIAGITAYSKERYPQTEIIGVEAKGATSMKAAYSAGQPVTLEHIDKFADGIAV EEECCCEEEEEEEHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCEEHHHHHHHHCCEEE ATVGQKTYQLINDKVKQLLAVDEGLISQTILELYSKLGIVAEPAGATSVAALELIKDEIK EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHC GKNIVCIISGGNNDISRMQEIEERALVYEGLKHYFVINFPQRPGALRTFVSDILGPNDDI CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCH TRFEYIKRADKGKGPCLVGILLSDASDYDSLIDRIERFDNRYVNLHGNDSLYELLV HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHCC >Mature Secondary Structure MISAKEVEDAYDLLKAVVTKTPLQLDPYLSNKYQANIYLKEENLQKVRSFKLRGAYYSIS CCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEEEHHHHHHHHHHHHCCCEEEHH KLSDEQRSKGVVCASAGNHAQGVAFAANQLNISATIFMPVTTPNQKISQVKFFGESHVTI HHCCHHHHCCEEEECCCCCCCCEEEEECEEEEEEEEEEEECCCCHHHHHEEEECCCCEEE RLIGDTFDESARAAKAFSQDNDKPFIDPFDDENVIAGQGTVALEIFAQAKKQGISLDKIF EEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEHHHHHHHHHHCCCEEEEE VQIGGGGLIAGITAYSKERYPQTEIIGVEAKGATSMKAAYSAGQPVTLEHIDKFADGIAV EEECCCEEEEEEEHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCEEHHHHHHHHCCEEE ATVGQKTYQLINDKVKQLLAVDEGLISQTILELYSKLGIVAEPAGATSVAALELIKDEIK EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHC GKNIVCIISGGNNDISRMQEIEERALVYEGLKHYFVINFPQRPGALRTFVSDILGPNDDI CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCH TRFEYIKRADKGKGPCLVGILLSDASDYDSLIDRIERFDNRYVNLHGNDSLYELLV HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1400210; 11337471