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The map label for this gene is ymdC

Identifier: 15673193

GI number: 15673193

Start: 1234060

End: 1234848

Strand: Direct

Name: ymdC

Synonym: L33782

Alternate gene names: 15673193

Gene position: 1234060-1234848 (Clockwise)

Preceding gene: 15673192

Following gene: 15673194

Centisome position: 52.17

GC content: 30.93

Gene sequence:

>789_bases
ATGACTAATCTAAAAGAATTAAGAATTAATATTGAGAAATTTCCTGAAGCACTTCACAATACGCTAAAAGATGCAAAAAT
ATATGATAGCAGTTCCTCTCCTGAAGCTCAAGTGTTATTCATTGATAAAAAAGATGGCTATTATTTAAAAATAGCTTCAT
CAAAAACTTTAGAGCGAGAAGCTGAAATGACTGCTTATTTTCAAAAGAAAAAGTTAGGTTTAGGATATATTTCTTATTTA
TCAGACCAGTCACAGGATTTTTTACTCAAGAAAAAAATTCAAGGAGAAAATTATTTGGCTAAACAATATCTTAATAATCC
GAAACGTCTGTGTGATAATCTTGCTGAAAATCTACGATTTCTTCATGAACAAAATTTTGAGGATTGTCCCATATTAGACC
ATTCTGAACGTTATCTGAAAAAAGTCGAAAAGAACGCAAGTATAAATAATTCAAATCTAGATTTTGTCAATAATTATAAT
ATCCGAACAATAGAAGAAGCTTATGATTATATAGAAAATAAAAAATTGCTATTAAGGAATGATACGCTTTTACATGGAGA
TTATTGTTTACCAAATATAATCCTAGACAATTGGAAGTTCAAAGGTTTTATTGATTTAGATTGTGCAGGTGTTGGCGACC
GACATATTGACCTCTTTTGGGGTGCATGGACGCTTAATTTTAATATTGGTACTGATCAATATCGTGACCGATTTTTTGAT
GCTTATGGTCGGGATAGAATCGATGTTGATCGTTTGAAATTGGTTGGCTGCTGTGAGGTTTTTGGTTAA

Upstream 100 bases:

>100_bases
TTATTGAAGGCATGTTTAAATCTACAGCGAGGGCGCTAAAACAAGCTGTAAGTATTGATGAAGCGAAAGTTGGAGAAATA
CCGAGCAGTAAGGGAGTGTT

Downstream 100 bases:

>100_bases
ATTGAATTTTAGTATATTTTGATATTGAAAGGAGTATTATGAAAAAAATTGTTATCATCGACTACAATATTGGAAATCTT
CAAAGTGTACAGGCCGCATT

Product: kanamycin kinase

Products: NA

Alternate protein names: Kanamycin kinase

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTNLKELRINIEKFPEALHNTLKDAKIYDSSSSPEAQVLFIDKKDGYYLKIASSKTLEREAEMTAYFQKKKLGLGYISYL
SDQSQDFLLKKKIQGENYLAKQYLNNPKRLCDNLAENLRFLHEQNFEDCPILDHSERYLKKVEKNASINNSNLDFVNNYN
IRTIEEAYDYIENKKLLLRNDTLLHGDYCLPNIILDNWKFKGFIDLDCAGVGDRHIDLFWGAWTLNFNIGTDQYRDRFFD
AYGRDRIDVDRLKLVGCCEVFG

Sequences:

>Translated_262_residues
MTNLKELRINIEKFPEALHNTLKDAKIYDSSSSPEAQVLFIDKKDGYYLKIASSKTLEREAEMTAYFQKKKLGLGYISYL
SDQSQDFLLKKKIQGENYLAKQYLNNPKRLCDNLAENLRFLHEQNFEDCPILDHSERYLKKVEKNASINNSNLDFVNNYN
IRTIEEAYDYIENKKLLLRNDTLLHGDYCLPNIILDNWKFKGFIDLDCAGVGDRHIDLFWGAWTLNFNIGTDQYRDRFFD
AYGRDRIDVDRLKLVGCCEVFG
>Mature_261_residues
TNLKELRINIEKFPEALHNTLKDAKIYDSSSSPEAQVLFIDKKDGYYLKIASSKTLEREAEMTAYFQKKKLGLGYISYLS
DQSQDFLLKKKIQGENYLAKQYLNNPKRLCDNLAENLRFLHEQNFEDCPILDHSERYLKKVEKNASINNSNLDFVNNYNI
RTIEEAYDYIENKKLLLRNDTLLHGDYCLPNIILDNWKFKGFIDLDCAGVGDRHIDLFWGAWTLNFNIGTDQYRDRFFDA
YGRDRIDVDRLKLVGCCEVFG

Specific function: Unknown

COG id: COG3231

COG function: function code J; Aminoglycoside phosphotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KKIH_LACLA (Q02149)

Other databases:

- EMBL:   U92974
- EMBL:   AE005176
- PIR:   C86776
- PIR:   H45734
- RefSeq:   NP_267367.1
- ProteinModelPortal:   Q02149
- SMR:   Q02149
- GeneID:   1114859
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L33782
- NMPDR:   fig|272623.1.peg.1246
- HOGENOM:   HBG517027
- OMA:   GDRHIDL
- ProtClustDB:   CLSK2517786
- BioCyc:   LLAC272623:L33782-MONOMER
- BRENDA:   2.7.1.95
- InterPro:   IPR002575
- InterPro:   IPR011009

Pfam domain/function: PF01636 APH; SSF56112 Kinase_like

EC number: =2.7.1.95

Molecular weight: Translated: 30721; Mature: 30590

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: ACT_SITE 187-187

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLKELRINIEKFPEALHNTLKDAKIYDSSSSPEAQVLFIDKKDGYYLKIASSKTLERE
CCCHHHHEEEHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCCCEEEEEECCCCHHHH
AEMTAYFQKKKLGLGYISYLSDQSQDFLLKKKIQGENYLAKQYLNNPKRLCDNLAENLRF
HHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH
LHEQNFEDCPILDHSERYLKKVEKNASINNSNLDFVNNYNIRTIEEAYDYIENKKLLLRN
HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCEEHHHHHHHHCCCEEEEEC
DTLLHGDYCLPNIILDNWKFKGFIDLDCAGVGDRHIDLFWGAWTLNFNIGTDQYRDRFFD
CCEEECCCCCCCEEECCCEECEEEEEEECCCCCCEEEEEEEEEEEEEECCCHHHHHHHHH
AYGRDRIDVDRLKLVGCCEVFG
HCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNLKELRINIEKFPEALHNTLKDAKIYDSSSSPEAQVLFIDKKDGYYLKIASSKTLERE
CCHHHHEEEHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCCCEEEEEECCCCHHHH
AEMTAYFQKKKLGLGYISYLSDQSQDFLLKKKIQGENYLAKQYLNNPKRLCDNLAENLRF
HHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH
LHEQNFEDCPILDHSERYLKKVEKNASINNSNLDFVNNYNIRTIEEAYDYIENKKLLLRN
HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCEEHHHHHHHHCCCEEEEEC
DTLLHGDYCLPNIILDNWKFKGFIDLDCAGVGDRHIDLFWGAWTLNFNIGTDQYRDRFFD
CCEEECCCCCCCEEECCCEECEEEEEEECCCCCCEEEEEEEEEEEEEECCCHHHHHHHHH
AYGRDRIDVDRLKLVGCCEVFG
HCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400209; 11337471