| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yliA
Identifier: 15673149
GI number: 15673149
Start: 1180044
End: 1180904
Strand: Direct
Name: yliA
Synonym: L179789
Alternate gene names: 15673149
Gene position: 1180044-1180904 (Clockwise)
Preceding gene: 15673148
Following gene: 15673150
Centisome position: 49.88
GC content: 34.49
Gene sequence:
>861_bases ATGGGAAATAAAACTGGCAAGATATTTTCGATTCTTAGAGAGGCGAAGCACTTAACACTTAGAGAAGTGACGGCAAATGA ATTCTCTTTGGCTCAGGAATCAAAGTTTGAACGTGGAGAAACCTCACTCACGATTGATAAATTTTTACTTTTGCTCCAAA ATACTCAACTCTCGTTAGATGAATTTCAAGATTTTTATGATAGTTATTCCTTGTCTGAAGACTATACTTTTCATGATGAG CTTCGAGAAGCCCATCGTATCAAAGACTTGAATCAAATCAAAAAATGGTTGCATTATTGGAAAGAGAAATCAGAAAAAAA TTCGGATAAAAAATATTTCAAATTAAATTACATTGTATCTAAGGTATCACTCGCTTCTACTGCTGGTGGGAAGCCCACCA AAGATGATATTGATGTTTTGATGAGTTATTTGGATTTAGTAGAACAGTGGGGGAGGTATGAAATTTGGGTGTTCAGTGTT TGTCAGCATTATCTTGACGATAATATGTTGGATTATTATGGTACAGAAATATTTGATAAGTCAAGTTACTATAAAAATGT TCACCAGAACCAACAAATGGTCATTCGGACAATGTTGAATCTTGCAGACACCTGGCTTAATCGAAAAAAATTAGAGAAGG CATTGGTTTGTCTTAATCGTGTTAAGACAATCGAAATACCGATTGAGTTTTTTGAAGAAGCCATTACATTAAGATATTTG GAAGGACATTATCTCCATCTATTGGAGGACCCAAAAGGGAAACTAATGATGCAAGATTGTGCTAAAGACATCGAAAAATA TGGATATACTCAAGCAGCTCAGGAGCTTTATGAAGAGATTTACGATTTAGGAGAATTGTAA
Upstream 100 bases:
>100_bases TCCATTTTTTTGTTCCATAATATCACTCTGAGCACATACCTCATACCTTACAGAGATTTTTGGTATAATTTGTTTGAATA TATGAGAAAGCGAAAAAATA
Downstream 100 bases:
>100_bases TGTTTTCATATATTTAAAAGTTTAAAAAATATTTAAGATAAAATGATAAAATCTCGATAACTTAGTTTAGTTATTGAGAT TTTATTTTAGGAGTACTCAT
Product: positive transcription regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MGNKTGKIFSILREAKHLTLREVTANEFSLAQESKFERGETSLTIDKFLLLLQNTQLSLDEFQDFYDSYSLSEDYTFHDE LREAHRIKDLNQIKKWLHYWKEKSEKNSDKKYFKLNYIVSKVSLASTAGGKPTKDDIDVLMSYLDLVEQWGRYEIWVFSV CQHYLDDNMLDYYGTEIFDKSSYYKNVHQNQQMVIRTMLNLADTWLNRKKLEKALVCLNRVKTIEIPIEFFEEAITLRYL EGHYLHLLEDPKGKLMMQDCAKDIEKYGYTQAAQELYEEIYDLGEL
Sequences:
>Translated_286_residues MGNKTGKIFSILREAKHLTLREVTANEFSLAQESKFERGETSLTIDKFLLLLQNTQLSLDEFQDFYDSYSLSEDYTFHDE LREAHRIKDLNQIKKWLHYWKEKSEKNSDKKYFKLNYIVSKVSLASTAGGKPTKDDIDVLMSYLDLVEQWGRYEIWVFSV CQHYLDDNMLDYYGTEIFDKSSYYKNVHQNQQMVIRTMLNLADTWLNRKKLEKALVCLNRVKTIEIPIEFFEEAITLRYL EGHYLHLLEDPKGKLMMQDCAKDIEKYGYTQAAQELYEEIYDLGEL >Mature_285_residues GNKTGKIFSILREAKHLTLREVTANEFSLAQESKFERGETSLTIDKFLLLLQNTQLSLDEFQDFYDSYSLSEDYTFHDEL REAHRIKDLNQIKKWLHYWKEKSEKNSDKKYFKLNYIVSKVSLASTAGGKPTKDDIDVLMSYLDLVEQWGRYEIWVFSVC QHYLDDNMLDYYGTEIFDKSSYYKNVHQNQQMVIRTMLNLADTWLNRKKLEKALVCLNRVKTIEIPIEFFEEAITLRYLE GHYLHLLEDPKGKLMMQDCAKDIEKYGYTQAAQELYEEIYDLGEL
Specific function: Regulates the expression of glucosyltransferase (gtfG) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 - InterPro: IPR010057 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 33958; Mature: 33827
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKTGKIFSILREAKHLTLREVTANEFSLAQESKFERGETSLTIDKFLLLLQNTQLSLD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHH EFQDFYDSYSLSEDYTFHDELREAHRIKDLNQIKKWLHYWKEKSEKNSDKKYFKLNYIVS HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KVSLASTAGGKPTKDDIDVLMSYLDLVEQWGRYEIWVFSVCQHYLDDNMLDYYGTEIFDK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCHHHHCC SSYYKNVHQNQQMVIRTMLNLADTWLNRKKLEKALVCLNRVKTIEIPIEFFEEAITLRYL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHH EGHYLHLLEDPKGKLMMQDCAKDIEKYGYTQAAQELYEEIYDLGEL CCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure GNKTGKIFSILREAKHLTLREVTANEFSLAQESKFERGETSLTIDKFLLLLQNTQLSLD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHH EFQDFYDSYSLSEDYTFHDELREAHRIKDLNQIKKWLHYWKEKSEKNSDKKYFKLNYIVS HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KVSLASTAGGKPTKDDIDVLMSYLDLVEQWGRYEIWVFSVCQHYLDDNMLDYYGTEIFDK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCHHHHCC SSYYKNVHQNQQMVIRTMLNLADTWLNRKKLEKALVCLNRVKTIEIPIEFFEEAITLRYL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHH EGHYLHLLEDPKGKLMMQDCAKDIEKYGYTQAAQELYEEIYDLGEL CCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1534326 [H]