Click here to switch to the map view.

The map label for this gene is yjhD

Identifier: 15672929

GI number: 15672929

Start: 972717

End: 974054

Strand: Direct

Name: yjhD

Synonym: L172471

Alternate gene names: NA

Gene position: 972717-974054 (Clockwise)

Preceding gene: 15672928

Following gene: 15672930

Centisome position: 41.12

GC content: 40.21

Gene sequence:

>1338_bases
ATGGATATTCAAAATATCAAAGAAACAATTGCGATGATTGAAGAACAAAATTTCGACATTCGCACAATAACAATGGGAAT
CAGTCTTCTTGATTGTATCGATGCTGATATTGATAAAGCAGCTGAAAAAATCTATCAAAAAATTGTCAAAAAAGCAGGAA
AACTTGTTGAAGTAGGTAACGAGATTGGACATGAACTCGGTATTAAAATTGTCAATAAACGTGTTTCTGTAACACCCATT
GCAATTATCGGAGCAGCAACAGCTGCTGATGATTACACACCACTTGCTCTTGCGATGGATCGTGCAGCAAAAGAGATTGG
CATCGACTTTATTGGTGGCTATTCTGCTCTTGTGCAAAAAGGCTATCAAAAAGGTGATGAAATTTTGATTAAATCAATGC
CTAAAGCACTAGCAGCAACTGAGCGCGTATGTGCTTCGGTAAATGTTGGTTCAACTAAAACAGGTATTAATATGACAGCA
GTTCGAGATATGGGTGAAACCATCAAAATCATGTCTAAAGGTGATAAATGGCTCAATGCCAAACTTGTTGTCTTTGCTAA
TGCCGTTGAAGACAATCCATTTATGGCAGGAGCTTTTCATGGAGTTGGGGAAGCAGATACGATTATCAACGTCGGAGTTT
CAGGACCTGGTGTAGTTAAACGTGCTCTTGAAAAAGTCCGCGGAGAATCTTTTGATATTTTAGCCGAAACCATTAAAAAG
ACAGCTTTTAAAATTACAAGAATTGGTCAACTTGTTGGTCAAATGGCTTCAGAAAGACTTAATGTTGAATTTGGAATAGT
TGATTTATCACTTGCACCTACACCAGCAATTGGCGATTCGGTTGCACGCGTTTTAGAAGAAATGGGACTTGAAACTGTTG
GGACTCATGGAACAACAGCCGCCCTAGCCATGCTTAATGACGCTGTGAAAAAAGGCGGAGTTATGGCAGCTGAACGTGTT
GGTGGACTTTCAGGCGCCTTTATCCCAGTTTCAGAAGATGAAGGAATGATTGCCGCTGTCAATTCTGGGGCATTGAATAT
TGAAAAATTAGAGGCCATGACTTGTGTTTGTTCAGTTGGCTTGGATATGATTGCAATTCCTGAAGAAACACCGGCATCTA
CCATTGCAGCAATGATTGCTGACGAAGCCGCCATCGGGGTCATTAATCAAAAAACGACAGCAGTACGGATTATTCCAATG
GGCAAAGAAGGCGAACAAATTGAATTTGGTGGACTTTTCGGTGTAGCACCAGTTATGAGAGTAAACAAAGCGTCGTCAGC
AGATTTTATTGCTCGTGGCGGTCAAATTCCAGCACCAATTCATTCATTTAAAAACTAA

Upstream 100 bases:

>100_bases
AATTAGCCAATAAATGACTTTTATTTAAAAGTATTTTTACTGACAGCACGAAAAAAATTTCTGTCAGTAAAATTTTAATC
AAAACTAAGGAAATTAAATA

Downstream 100 bases:

>100_bases
AAATACTTTTAAAATTTAGCTCCTAAACATTTCTAAAAAATGATGAGCGCTTCCAAAAATGATATAATAGAAGAAGTGAA
AAAATACGGAGGTTATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MDIQNIKETIAMIEEQNFDIRTITMGISLLDCIDADIDKAAEKIYQKIVKKAGKLVEVGNEIGHELGIKIVNKRVSVTPI
AIIGAATAADDYTPLALAMDRAAKEIGIDFIGGYSALVQKGYQKGDEILIKSMPKALAATERVCASVNVGSTKTGINMTA
VRDMGETIKIMSKGDKWLNAKLVVFANAVEDNPFMAGAFHGVGEADTIINVGVSGPGVVKRALEKVRGESFDILAETIKK
TAFKITRIGQLVGQMASERLNVEFGIVDLSLAPTPAIGDSVARVLEEMGLETVGTHGTTAALAMLNDAVKKGGVMAAERV
GGLSGAFIPVSEDEGMIAAVNSGALNIEKLEAMTCVCSVGLDMIAIPEETPASTIAAMIADEAAIGVINQKTTAVRIIPM
GKEGEQIEFGGLFGVAPVMRVNKASSADFIARGGQIPAPIHSFKN

Sequences:

>Translated_445_residues
MDIQNIKETIAMIEEQNFDIRTITMGISLLDCIDADIDKAAEKIYQKIVKKAGKLVEVGNEIGHELGIKIVNKRVSVTPI
AIIGAATAADDYTPLALAMDRAAKEIGIDFIGGYSALVQKGYQKGDEILIKSMPKALAATERVCASVNVGSTKTGINMTA
VRDMGETIKIMSKGDKWLNAKLVVFANAVEDNPFMAGAFHGVGEADTIINVGVSGPGVVKRALEKVRGESFDILAETIKK
TAFKITRIGQLVGQMASERLNVEFGIVDLSLAPTPAIGDSVARVLEEMGLETVGTHGTTAALAMLNDAVKKGGVMAAERV
GGLSGAFIPVSEDEGMIAAVNSGALNIEKLEAMTCVCSVGLDMIAIPEETPASTIAAMIADEAAIGVINQKTTAVRIIPM
GKEGEQIEFGGLFGVAPVMRVNKASSADFIARGGQIPAPIHSFKN
>Mature_445_residues
MDIQNIKETIAMIEEQNFDIRTITMGISLLDCIDADIDKAAEKIYQKIVKKAGKLVEVGNEIGHELGIKIVNKRVSVTPI
AIIGAATAADDYTPLALAMDRAAKEIGIDFIGGYSALVQKGYQKGDEILIKSMPKALAATERVCASVNVGSTKTGINMTA
VRDMGETIKIMSKGDKWLNAKLVVFANAVEDNPFMAGAFHGVGEADTIINVGVSGPGVVKRALEKVRGESFDILAETIKK
TAFKITRIGQLVGQMASERLNVEFGIVDLSLAPTPAIGDSVARVLEEMGLETVGTHGTTAALAMLNDAVKKGGVMAAERV
GGLSGAFIPVSEDEGMIAAVNSGALNIEKLEAMTCVCSVGLDMIAIPEETPASTIAAMIADEAAIGVINQKTTAVRIIPM
GKEGEQIEFGGLFGVAPVMRVNKASSADFIARGGQIPAPIHSFKN

Specific function: Unknown

COG id: COG2848

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0210 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007841 [H]

Pfam domain/function: PF05167 DUF711 [H]

EC number: NA

Molecular weight: Translated: 46773; Mature: 46773

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQNIKETIAMIEEQNFDIRTITMGISLLDCIDADIDKAAEKIYQKIVKKAGKLVEVGN
CCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHH
EIGHELGIKIVNKRVSVTPIAIIGAATAADDYTPLALAMDRAAKEIGIDFIGGYSALVQK
HHHHHHCHHEECCCCEECEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHH
GYQKGDEILIKSMPKALAATERVCASVNVGSTKTGINMTAVRDMGETIKIMSKGDKWLNA
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHHHHHHCCCCCCCE
KLVVFANAVEDNPFMAGAFHGVGEADTIINVGVSGPGVVKRALEKVRGESFDILAETIKK
EEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHH
TAFKITRIGQLVGQMASERLNVEFGIVDLSLAPTPAIGDSVARVLEEMGLETVGTHGTTA
HHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHH
ALAMLNDAVKKGGVMAAERVGGLSGAFIPVSEDEGMIAAVNSGALNIEKLEAMTCVCSVG
HHHHHHHHHHHCCCEEHHHCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCC
LDMIAIPEETPASTIAAMIADEAAIGVINQKTTAVRIIPMGKEGEQIEFGGLFGVAPVMR
CCEEECCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCEEEECCCHHHHHHHH
VNKASSADFIARGGQIPAPIHSFKN
CCCCCCCHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure
MDIQNIKETIAMIEEQNFDIRTITMGISLLDCIDADIDKAAEKIYQKIVKKAGKLVEVGN
CCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHH
EIGHELGIKIVNKRVSVTPIAIIGAATAADDYTPLALAMDRAAKEIGIDFIGGYSALVQK
HHHHHHCHHEECCCCEECEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHH
GYQKGDEILIKSMPKALAATERVCASVNVGSTKTGINMTAVRDMGETIKIMSKGDKWLNA
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHHHHHHCCCCCCCE
KLVVFANAVEDNPFMAGAFHGVGEADTIINVGVSGPGVVKRALEKVRGESFDILAETIKK
EEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHH
TAFKITRIGQLVGQMASERLNVEFGIVDLSLAPTPAIGDSVARVLEEMGLETVGTHGTTA
HHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHH
ALAMLNDAVKKGGVMAAERVGGLSGAFIPVSEDEGMIAAVNSGALNIEKLEAMTCVCSVG
HHHHHHHHHHHCCCEEHHHCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCC
LDMIAIPEETPASTIAAMIADEAAIGVINQKTTAVRIIPMGKEGEQIEFGGLFGVAPVMR
CCEEECCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCEEEECCCHHHHHHHH
VNKASSADFIARGGQIPAPIHSFKN
CCCCCCCHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA