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The map label for this gene is deoB

Identifier: 15672911

GI number: 15672911

Start: 955189

End: 956424

Strand: Direct

Name: deoB

Synonym: L154925

Alternate gene names: 15672911

Gene position: 955189-956424 (Clockwise)

Preceding gene: 15672910

Following gene: 15672912

Centisome position: 40.38

GC content: 39.24

Gene sequence:

>1236_bases
ATGCCTAAAAAATTTGGTCGTATTCATCTTGTTGTAATGGACTCTGTCGGAATTGGTGCTGCACCAGATGCTGACAAATT
CTTTAATCATGACGTTGAAACGCATGAAGCAATTAATGATGTGAACTCAGACACGATTGGTCATATTTCAGAAATTCGTG
GGCTTGATGTGCCTAACCTTCAAAAATTGGGTTGGGGAAATATCCCGCGCGAAAGTCCGCTCAAAACGGTTCCAAAAGCT
GATAAACCAGCAGCATATGTCACTAAACTAGAAGAAATTTCAAAAGGTAAGGATACAATGACTGGGCACTGGGAAATTAT
GGGCTTAAATATTCAAACGCCATTCCCAACTTATCCAGAAGGTTATCCAGAGGATTTACTTGAAAAAATTGAAGAATTTT
CTGGCCGTAAAATCATTCGTGAAGCAAATAAACCTTATTCTGGAACAGCAGTCATTGAAGATTTTGGTCCTCGTCAATTG
GAAACTGGTGAGTTGATTATTTATACTTCAGCAGACCCTGTTTTGCAAATTGCGGCACATGAAGATGTCATTTCTCGTGA
AGAACTTTATAAAATTTGTGAATATGTTCGTTCAATTACCCTTGAAGGGTCTGGAATCATGATTGGCCGAATCATCGCTC
GCCCTTATGTTGGAGAAGCTGGAAACTTTGAACGGACTGATGGACGTCGTGACTATGCTTTGTCACCATTTGCTGAAACA
GTTTTGGAAAAACTTTATAAGGCTGGAATTGATACTTATTCAGTTGGGAAGATTTCAGATATTTTCAACACAGTAGGTGT
GAAATATGATATGGGGCATAATCATAACGATATGGACGGGGTTGACCGTCTGCTTAAAGCGATGACAAAAGCTGAGTTTA
CCGAAGGATTTTCTTTCACAAACTTAGTTGACTTCGATGCTAAATATGGACATCGTCGCGATGTTGAAGGTTACGGAAAA
GCAATTGAAGACTTTGACGGTCGTTTGCCAGAAATCATTGATGTAATGAAAGAAGATGATTTGTTGATGATTACTGCTGA
CCACGGAAATGACCCTTCGTACGTAGGAACTGACCATACTCGTGAATATATTCCACTCGTGATTTTCTCTAAATCATTGA
AAGACCCTAAAGTTTTACCAGTGGGACATTTTGCTGATATTTCAGCAACTGTTGCCGAAAACTTCTCTGTAAAGAAGGCT
CAAACTGGTGAATCATTCTTGGATGCTTTGGTTTAA

Upstream 100 bases:

>100_bases
TATTTTTTTAACAGCTTTGACTGCCCTTTTTGGAAGAGTTTATGTATAATAGAATTAGTTAGTTTTGCTATCGATATAGC
AGCAGAAATGGAGAGATATA

Downstream 100 bases:

>100_bases
TAGAAAAAAATTTCTGTCAGTAAATTTTACTGACAGAGTTTAGAAAGATTTATTTATGGCTAAGAAAGCATTTTGTCAGT
CGTGTGGAATGCCAATTGCT

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MPKKFGRIHLVVMDSVGIGAAPDADKFFNHDVETHEAINDVNSDTIGHISEIRGLDVPNLQKLGWGNIPRESPLKTVPKA
DKPAAYVTKLEEISKGKDTMTGHWEIMGLNIQTPFPTYPEGYPEDLLEKIEEFSGRKIIREANKPYSGTAVIEDFGPRQL
ETGELIIYTSADPVLQIAAHEDVISREELYKICEYVRSITLEGSGIMIGRIIARPYVGEAGNFERTDGRRDYALSPFAET
VLEKLYKAGIDTYSVGKISDIFNTVGVKYDMGHNHNDMDGVDRLLKAMTKAEFTEGFSFTNLVDFDAKYGHRRDVEGYGK
AIEDFDGRLPEIIDVMKEDDLLMITADHGNDPSYVGTDHTREYIPLVIFSKSLKDPKVLPVGHFADISATVAENFSVKKA
QTGESFLDALV

Sequences:

>Translated_411_residues
MPKKFGRIHLVVMDSVGIGAAPDADKFFNHDVETHEAINDVNSDTIGHISEIRGLDVPNLQKLGWGNIPRESPLKTVPKA
DKPAAYVTKLEEISKGKDTMTGHWEIMGLNIQTPFPTYPEGYPEDLLEKIEEFSGRKIIREANKPYSGTAVIEDFGPRQL
ETGELIIYTSADPVLQIAAHEDVISREELYKICEYVRSITLEGSGIMIGRIIARPYVGEAGNFERTDGRRDYALSPFAET
VLEKLYKAGIDTYSVGKISDIFNTVGVKYDMGHNHNDMDGVDRLLKAMTKAEFTEGFSFTNLVDFDAKYGHRRDVEGYGK
AIEDFDGRLPEIIDVMKEDDLLMITADHGNDPSYVGTDHTREYIPLVIFSKSLKDPKVLPVGHFADISATVAENFSVKKA
QTGESFLDALV
>Mature_410_residues
PKKFGRIHLVVMDSVGIGAAPDADKFFNHDVETHEAINDVNSDTIGHISEIRGLDVPNLQKLGWGNIPRESPLKTVPKAD
KPAAYVTKLEEISKGKDTMTGHWEIMGLNIQTPFPTYPEGYPEDLLEKIEEFSGRKIIREANKPYSGTAVIEDFGPRQLE
TGELIIYTSADPVLQIAAHEDVISREELYKICEYVRSITLEGSGIMIGRIIARPYVGEAGNFERTDGRRDYALSPFAETV
LEKLYKAGIDTYSVGKISDIFNTVGVKYDMGHNHNDMDGVDRLLKAMTKAEFTEGFSFTNLVDFDAKYGHRRDVEGYGKA
IEDFDGRLPEIIDVMKEDDLLMITADHGNDPSYVGTDHTREYIPLVIFSKSLKDPKVLPVGHFADISATVAENFSVKKAQ
TGESFLDALV

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family

Homologues:

Organism=Escherichia coli, GI1790843, Length=437, Percent_Identity=38.9016018306636, Blast_Score=268, Evalue=5e-73,
Organism=Escherichia coli, GI1789781, Length=433, Percent_Identity=27.9445727482679, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOB_LACLA (Q9CH12)

Other databases:

- EMBL:   AE005176
- PIR:   A86741
- RefSeq:   NP_267085.1
- ProteinModelPortal:   Q9CH12
- PhosSite:   Q9CH12
- GeneID:   1114559
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L154925
- NMPDR:   fig|272623.1.peg.951
- HOGENOM:   HBG644230
- OMA:   CHASGTE
- ProtClustDB:   PRK05362
- BioCyc:   LLAC272623:L154925-MONOMER
- BRENDA:   5.4.2.7
- GO:   GO:0005737
- HAMAP:   MF_00740
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF001491
- TIGRFAMs:   TIGR01696

Pfam domain/function: PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.7

Molecular weight: Translated: 45770; Mature: 45639

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKFGRIHLVVMDSVGIGAAPDADKFFNHDVETHEAINDVNSDTIGHISEIRGLDVPNL
CCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCH
QKLGWGNIPRESPLKTVPKADKPAAYVTKLEEISKGKDTMTGHWEIMGLNIQTPFPTYPE
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCC
GYPEDLLEKIEEFSGRKIIREANKPYSGTAVIEDFGPRQLETGELIIYTSADPVLQIAAH
CCCHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCEECCCCEEEEECCCCEEEEECH
EDVISREELYKICEYVRSITLEGSGIMIGRIIARPYVGEAGNFERTDGRRDYALSPFAET
HHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
VLEKLYKAGIDTYSVGKISDIFNTVGVKYDMGHNHNDMDGVDRLLKAMTKAEFTEGFSFT
HHHHHHHCCCCCCCCCHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
NLVDFDAKYGHRRDVEGYGKAIEDFDGRLPEIIDVMKEDDLLMITADHGNDPSYVGTDHT
EEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
REYIPLVIFSKSLKDPKVLPVGHFADISATVAENFSVKKAQTGESFLDALV
CHHEEEEEEECCCCCCCEEECCCCCCCHHHHHHCCCCCCHHCHHHHHHHHC
>Mature Secondary Structure 
PKKFGRIHLVVMDSVGIGAAPDADKFFNHDVETHEAINDVNSDTIGHISEIRGLDVPNL
CCCCCEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCH
QKLGWGNIPRESPLKTVPKADKPAAYVTKLEEISKGKDTMTGHWEIMGLNIQTPFPTYPE
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCC
GYPEDLLEKIEEFSGRKIIREANKPYSGTAVIEDFGPRQLETGELIIYTSADPVLQIAAH
CCCHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCEECCCCEEEEECCCCEEEEECH
EDVISREELYKICEYVRSITLEGSGIMIGRIIARPYVGEAGNFERTDGRRDYALSPFAET
HHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
VLEKLYKAGIDTYSVGKISDIFNTVGVKYDMGHNHNDMDGVDRLLKAMTKAEFTEGFSFT
HHHHHHHCCCCCCCCCHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
NLVDFDAKYGHRRDVEGYGKAIEDFDGRLPEIIDVMKEDDLLMITADHGNDPSYVGTDHT
EEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
REYIPLVIFSKSLKDPKVLPVGHFADISATVAENFSVKKAQTGESFLDALV
CHHEEEEEEECCCCCCCEEECCCCCCCHHHHHHCCCCCCHHCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11337471