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The map label for this gene is yjfE

Identifier: 15672910

GI number: 15672910

Start: 954083

End: 955003

Strand: Direct

Name: yjfE

Synonym: L153822

Alternate gene names: 15672910

Gene position: 954083-955003 (Clockwise)

Preceding gene: 15672909

Following gene: 15672911

Centisome position: 40.33

GC content: 33.44

Gene sequence:

>921_bases
ATGGTTAAATCCAGAGTGGCAGAAAATGGAAGGCAAATAAAACGTGGAAACAAAAAGAAGAAGAGAAAAGTTTTAAAAAT
ATTTTTATTTGTACTTTTGTTTTTTATCATTATTTTAGGAGCTGTTGGTGGAAAAGTTTATTTTGATTTGAAAACAGCCG
TAACGAAGGCTTATGTGAATCCGCCAACGCAAATGACCTCTATTTCCTTAAAAAAGAAAGAGCCATTTACGACGGCAATT
CTTGGAATAAGTAAAATTGATGGGAAAGATGTATTGGTGTCGGCAAATTTGGCAGCAACAAACCCTCGTTTACAACAAAC
AACCGTTATCAATCTTTCTACAAGTGCCATACTTCCAGACAAACAAACCTTATTAACTCTCTATAATTCTAAGGGAGAAG
CTGCGGTTATTAAAGAAATGGAAAAACTACTTCAGGTTAAAATTAATAAATTTGTAGGAAGGAATTTCGATCAAATGGGA
GAATTAGTTCAAGCGATTGGTGGCGTATCCATTCAAAATGCTAATGAATTTTCGGCACAAGGGTTTAAATTTCCTCAAGG
AACAGTTGCTTTAAATAAAGCAGAGGAAGTGGCAGCATATTTTACTTTGTTAAATGCTGGAGATACTAAAAAAGCTTTTG
CACGTCAGCAAGAAGTAGTGATGGCAGTCGTTAGCAAACTCAAAAGTCCACGTGTTTTAATTAGACATTATGGTCAAATT
TTGACGGCATTCCCTAAGGTTTTTAAAACAAGTTTTAACTTTGGAAATGTTAAGGCTTTAGCATTAAATTATAATGGAGC
AATAAGGATTAAAAAAATTAATGTCCGTAGTAGCAAAGTAGCAGGTCAGTCAGAAGTTACAGCAATTTCACAATCAAATC
TTGATTTGGCAAAAATACAATTTCAAGAAAGTTTAAAATAA

Upstream 100 bases:

>100_bases
CAATTATTTACTGATAAAATGTATAAATTTAGAGATGGAAAATCAACGGACCGAGTCTTAGATTTGATTGAGTCAATTAT
GAGAGGTTAAGGAGAATAAA

Downstream 100 bases:

>100_bases
AAAGAAAAAAATCATTGGACAAACATCTAATGATTTTTTTATGACATCTATTTAGTAGAAAATGCAATTTTTGACAAAAA
GAATGTATTTTTTTAACAGC

Product: transcription regulator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MVKSRVAENGRQIKRGNKKKKRKVLKIFLFVLLFFIIILGAVGGKVYFDLKTAVTKAYVNPPTQMTSISLKKKEPFTTAI
LGISKIDGKDVLVSANLAATNPRLQQTTVINLSTSAILPDKQTLLTLYNSKGEAAVIKEMEKLLQVKINKFVGRNFDQMG
ELVQAIGGVSIQNANEFSAQGFKFPQGTVALNKAEEVAAYFTLLNAGDTKKAFARQQEVVMAVVSKLKSPRVLIRHYGQI
LTAFPKVFKTSFNFGNVKALALNYNGAIRIKKINVRSSKVAGQSEVTAISQSNLDLAKIQFQESLK

Sequences:

>Translated_306_residues
MVKSRVAENGRQIKRGNKKKKRKVLKIFLFVLLFFIIILGAVGGKVYFDLKTAVTKAYVNPPTQMTSISLKKKEPFTTAI
LGISKIDGKDVLVSANLAATNPRLQQTTVINLSTSAILPDKQTLLTLYNSKGEAAVIKEMEKLLQVKINKFVGRNFDQMG
ELVQAIGGVSIQNANEFSAQGFKFPQGTVALNKAEEVAAYFTLLNAGDTKKAFARQQEVVMAVVSKLKSPRVLIRHYGQI
LTAFPKVFKTSFNFGNVKALALNYNGAIRIKKINVRSSKVAGQSEVTAISQSNLDLAKIQFQESLK
>Mature_306_residues
MVKSRVAENGRQIKRGNKKKKRKVLKIFLFVLLFFIIILGAVGGKVYFDLKTAVTKAYVNPPTQMTSISLKKKEPFTTAI
LGISKIDGKDVLVSANLAATNPRLQQTTVINLSTSAILPDKQTLLTLYNSKGEAAVIKEMEKLLQVKINKFVGRNFDQMG
ELVQAIGGVSIQNANEFSAQGFKFPQGTVALNKAEEVAAYFTLLNAGDTKKAFARQQEVVMAVVSKLKSPRVLIRHYGQI
LTAFPKVFKTSFNFGNVKALALNYNGAIRIKKINVRSSKVAGQSEVTAISQSNLDLAKIQFQESLK

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 33658; Mature: 33658

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSRVAENGRQIKRGNKKKKRKVLKIFLFVLLFFIIILGAVGGKVYFDLKTAVTKAYVN
CCCCHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCC
PPTQMTSISLKKKEPFTTAILGISKIDGKDVLVSANLAATNPRLQQTTVINLSTSAILPD
CCCCEEEEEECCCCCCHHHHEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCEECCC
KQTLLTLYNSKGEAAVIKEMEKLLQVKINKFVGRNFDQMGELVQAIGGVSIQNANEFSAQ
CHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCC
GFKFPQGTVALNKAEEVAAYFTLLNAGDTKKAFARQQEVVMAVVSKLKSPRVLIRHYGQI
CCCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LTAFPKVFKTSFNFGNVKALALNYNGAIRIKKINVRSSKVAGQSEVTAISQSNLDLAKIQ
HHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEEECCHHHCCCCHHHEEECCCCCCHHEEH
FQESLK
HHHHCC
>Mature Secondary Structure
MVKSRVAENGRQIKRGNKKKKRKVLKIFLFVLLFFIIILGAVGGKVYFDLKTAVTKAYVN
CCCCHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCC
PPTQMTSISLKKKEPFTTAILGISKIDGKDVLVSANLAATNPRLQQTTVINLSTSAILPD
CCCCEEEEEECCCCCCHHHHEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCEECCC
KQTLLTLYNSKGEAAVIKEMEKLLQVKINKFVGRNFDQMGELVQAIGGVSIQNANEFSAQ
CHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCC
GFKFPQGTVALNKAEEVAAYFTLLNAGDTKKAFARQQEVVMAVVSKLKSPRVLIRHYGQI
CCCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LTAFPKVFKTSFNFGNVKALALNYNGAIRIKKINVRSSKVAGQSEVTAISQSNLDLAKIQ
HHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEEECCHHHCCCCHHHEEECCCCCCHHEEH
FQESLK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12663927 [H]