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The map label for this gene is yijC

Identifier: 15672852

GI number: 15672852

Start: 893298

End: 894818

Strand: Direct

Name: yijC

Synonym: L92987

Alternate gene names: 15672852

Gene position: 893298-894818 (Clockwise)

Preceding gene: 15672851

Following gene: 30024011

Centisome position: 37.76

GC content: 36.62

Gene sequence:

>1521_bases
ATGGATTTTATAAGACGTGCATGGCTTTTCACTAAAGCCAAAATTGGACGGACAATACTTTTAATTGTTGCCTTTTCAGC
AATTTTAATTTTTGTACTTTCAGGATTAATTATTAATAGTGCAGCTAATGTTTCTATTGATAATGCTAAAAAATCAGCTG
GAGCAACCGTGTCACTCTCTGTTAACATGCAAAATGTTATCAAAGAAGCACAAAATAGTGCAACATCAAGTTCAAGTAGT
AGCAGTTCAAGTGATACTGCTGAAGCAGGTAAACGATTTAATATTGATTTACCAACGATTTCAGAAACAACTGCTGAAAA
AATTGCCAAACTTGATGGTGTAAAATCAGCAAGTTTCACTTATCAGGCTCAAGCATCAGCAAGTTCTGGTATTGAAAAAG
TTTCAACAAGTAGTAGTTCTTCAAGTTCATCAACAGATACGCAAGCAGCTGGTGGATTTGGTGTACGTGAAGGAGGAATG
GGCAGAGGTTCCCAAGAGGATTTCACAATCAGTGGGACAAATGATTTAGCAGCAAGTACAAGCTTCACAGATTCTTATAA
GATTAGTTCTGGACGCGCAATTAAGGCTTCAGATGAGGGGACGAACAATGTTGTCATTGAATCAACCCTTGCTAGCCAAA
ACTCATTAAAAGTGGGTTCAACTTTCACAATCAAAGATAGTAATGACAAAACATATAAAATGACTGTTGTTGGTATCTAT
ACAACAACAAGTAGCTCGACAGAAAGCTCAATTCAATACATGAATACAATGTATACTGCACTTTCTGTAGCAAATTCTAT
CAAAGGTACGACTGGCAAAGTATCAAATGCAACTTACAGCATGGAAAATCCTGCACAAGCAGATACTTTTGTAAAAGCTG
CTAATAAATTAGTTAATGACAGTAATTTCCAAGTTTCTAAAAATGACCAAGCTTATCAAAATGTAAAATCATCATTGAAT
AATGTTGCAAGTTTTGCTAGAAATATTGTACTCATTGTAGCAATTGCTGGAGCAATTATCTTAGAGCTTATCGTGATGCT
CATGGTTCGCGAACGTCGTTTTGAAATTGGTGTTCTGATGAGTCTTGGAGAATCAAAACTCAAAATTATTGGCCAATTTT
TCTTTGAACTCTTCATGGTTATGATTGTTTCGGTTGGTATTGCATCAGCTGCTGGAAATGTAGTAGGAAATGTAGTTGGA
CAACAACTTTTAAAACAAGAAACAACGCAGACAACGGCAAGCACAAGCAACATGCAAGGAGCTCCAGGAGCAAATGGAGG
CAAAACCGAAGGTCAAAGACCATCAGAAAATGCTGGCGGATTTATGGGGCGTGCAGGTGGAGCAATTGGCTTTGGACAAT
CAGCTTCTGAAGCAAAAGCACTTGAAAAATTGAATATTAAAACTTCTGTCAGTGAAATTTTACTTCTTGTTGCTATTGCG
ATTTTGATTACACTAATCGCTGTCGGTCTAGCAAGTATTGGAATTCTCAGATTGAATCCTAAACAAGTTTTAACAAATTG
A

Upstream 100 bases:

>100_bases
ATCATTCTTTCCGTCTTTATTTTTAATAAATTGACTGACGTGCTTAAAATCGACTTACAAAAAAGAGTCTATCAGAAGAA
GACTCAGAAATGAGGAAAAT

Downstream 100 bases:

>100_bases
TTTCTAAGAAGAACCAGTCTAATAATTTACTGACGCCTTCATTTTTTATCAAAAATTAATCACCAGATTTTGTCAGTAAA
TTTTTAAAATGAGAGGAGCA

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MDFIRRAWLFTKAKIGRTILLIVAFSAILIFVLSGLIINSAANVSIDNAKKSAGATVSLSVNMQNVIKEAQNSATSSSSS
SSSSDTAEAGKRFNIDLPTISETTAEKIAKLDGVKSASFTYQAQASASSGIEKVSTSSSSSSSSTDTQAAGGFGVREGGM
GRGSQEDFTISGTNDLAASTSFTDSYKISSGRAIKASDEGTNNVVIESTLASQNSLKVGSTFTIKDSNDKTYKMTVVGIY
TTTSSSTESSIQYMNTMYTALSVANSIKGTTGKVSNATYSMENPAQADTFVKAANKLVNDSNFQVSKNDQAYQNVKSSLN
NVASFARNIVLIVAIAGAIILELIVMLMVRERRFEIGVLMSLGESKLKIIGQFFFELFMVMIVSVGIASAAGNVVGNVVG
QQLLKQETTQTTASTSNMQGAPGANGGKTEGQRPSENAGGFMGRAGGAIGFGQSASEAKALEKLNIKTSVSEILLLVAIA
ILITLIAVGLASIGILRLNPKQVLTN

Sequences:

>Translated_506_residues
MDFIRRAWLFTKAKIGRTILLIVAFSAILIFVLSGLIINSAANVSIDNAKKSAGATVSLSVNMQNVIKEAQNSATSSSSS
SSSSDTAEAGKRFNIDLPTISETTAEKIAKLDGVKSASFTYQAQASASSGIEKVSTSSSSSSSSTDTQAAGGFGVREGGM
GRGSQEDFTISGTNDLAASTSFTDSYKISSGRAIKASDEGTNNVVIESTLASQNSLKVGSTFTIKDSNDKTYKMTVVGIY
TTTSSSTESSIQYMNTMYTALSVANSIKGTTGKVSNATYSMENPAQADTFVKAANKLVNDSNFQVSKNDQAYQNVKSSLN
NVASFARNIVLIVAIAGAIILELIVMLMVRERRFEIGVLMSLGESKLKIIGQFFFELFMVMIVSVGIASAAGNVVGNVVG
QQLLKQETTQTTASTSNMQGAPGANGGKTEGQRPSENAGGFMGRAGGAIGFGQSASEAKALEKLNIKTSVSEILLLVAIA
ILITLIAVGLASIGILRLNPKQVLTN
>Mature_506_residues
MDFIRRAWLFTKAKIGRTILLIVAFSAILIFVLSGLIINSAANVSIDNAKKSAGATVSLSVNMQNVIKEAQNSATSSSSS
SSSSDTAEAGKRFNIDLPTISETTAEKIAKLDGVKSASFTYQAQASASSGIEKVSTSSSSSSSSTDTQAAGGFGVREGGM
GRGSQEDFTISGTNDLAASTSFTDSYKISSGRAIKASDEGTNNVVIESTLASQNSLKVGSTFTIKDSNDKTYKMTVVGIY
TTTSSSTESSIQYMNTMYTALSVANSIKGTTGKVSNATYSMENPAQADTFVKAANKLVNDSNFQVSKNDQAYQNVKSSLN
NVASFARNIVLIVAIAGAIILELIVMLMVRERRFEIGVLMSLGESKLKIIGQFFFELFMVMIVSVGIASAAGNVVGNVVG
QQLLKQETTQTTASTSNMQGAPGANGGKTEGQRPSENAGGFMGRAGGAIGFGQSASEAKALEKLNIKTSVSEILLLVAIA
ILITLIAVGLASIGILRLNPKQVLTN

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 52844; Mature: 52844

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFIRRAWLFTKAKIGRTILLIVAFSAILIFVLSGLIINSAANVSIDNAKKSAGATVSLS
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEE
VNMQNVIKEAQNSATSSSSSSSSSDTAEAGKRFNIDLPTISETTAEKIAKLDGVKSASFT
CCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCEE
YQAQASASSGIEKVSTSSSSSSSSTDTQAAGGFGVREGGMGRGSQEDFTISGTNDLAAST
EEECCCHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
SFTDSYKISSGRAIKASDEGTNNVVIESTLASQNSLKVGSTFTIKDSNDKTYKMTVVGIY
CCCCCEEECCCCEEECCCCCCCCEEEEEECCCCCCEECCCEEEEECCCCCEEEEEEEEEE
TTTSSSTESSIQYMNTMYTALSVANSIKGTTGKVSNATYSMENPAQADTFVKAANKLVND
EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCC
SNFQVSKNDQAYQNVKSSLNNVASFARNIVLIVAIAGAIILELIVMLMVRERRFEIGVLM
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLGESKLKIIGQFFFELFMVMIVSVGIASAAGNVVGNVVGQQLLKQETTQTTASTSNMQG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APGANGGKTEGQRPSENAGGFMGRAGGAIGFGQSASEAKALEKLNIKTSVSEILLLVAIA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
ILITLIAVGLASIGILRLNPKQVLTN
HHHHHHHHHHHHCCEEEECHHHHHCC
>Mature Secondary Structure
MDFIRRAWLFTKAKIGRTILLIVAFSAILIFVLSGLIINSAANVSIDNAKKSAGATVSLS
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEE
VNMQNVIKEAQNSATSSSSSSSSSDTAEAGKRFNIDLPTISETTAEKIAKLDGVKSASFT
CCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCEE
YQAQASASSGIEKVSTSSSSSSSSTDTQAAGGFGVREGGMGRGSQEDFTISGTNDLAAST
EEECCCHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
SFTDSYKISSGRAIKASDEGTNNVVIESTLASQNSLKVGSTFTIKDSNDKTYKMTVVGIY
CCCCCEEECCCCEEECCCCCCCCEEEEEECCCCCCEECCCEEEEECCCCCEEEEEEEEEE
TTTSSSTESSIQYMNTMYTALSVANSIKGTTGKVSNATYSMENPAQADTFVKAANKLVND
EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCC
SNFQVSKNDQAYQNVKSSLNNVASFARNIVLIVAIAGAIILELIVMLMVRERRFEIGVLM
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLGESKLKIIGQFFFELFMVMIVSVGIASAAGNVVGNVVGQQLLKQETTQTTASTSNMQG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APGANGGKTEGQRPSENAGGFMGRAGGAIGFGQSASEAKALEKLNIKTSVSEILLLVAIA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
ILITLIAVGLASIGILRLNPKQVLTN
HHHHHHHHHHHHCCEEEECHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]