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The map label for this gene is yidB

Identifier: 15672800

GI number: 15672800

Start: 831369

End: 832787

Strand: Direct

Name: yidB

Synonym: L31294

Alternate gene names: 15672800

Gene position: 831369-832787 (Clockwise)

Preceding gene: 15672799

Following gene: 15672801

Centisome position: 35.14

GC content: 38.76

Gene sequence:

>1419_bases
ATGAACGGCTTCATAAATAATAAAGTCTTACCGCCAATTATGAAATTCGTGAATACACGAGCGATGACTGCTTTGAAAAA
TGGAATGCTTTTTGCCATGCCATTTATCATTGTTGGGTCAATTTTCTTGATTCTGGCGAATATTCCAATTCCACCTGTGG
CAAAATGGTTATCAGACAATGGCTGGTCAGCAATTTTTACCCAAGCATTTAACGTATCATTCGGTATTTTAGCGATTTGG
GCAGCAGTCGGTATTGGCTATTCTTATGTCAAAGAAGCTGGATTTGGTGATGTTGCTTTACAAGGAGGATTAACTTCTCT
CTCTGCATTTTTCATTGTTCAATCTCTAAGTATTGCAAATCCAATCACAGCGGCACTAGCTACTGGGAAAGAAGCCTCAG
GCATTGGGAATCTCACAGGAACACAAGCAACGGCTGCTTTTGAAAAGCTTCCTCATGCCATGCAAGTCTTTCTAAATAAT
CCAGTGACAGGAGTGCTCAATTTAACTTGGAACGGTGGTCAAGGAATGATTGCGGCCATTATTATTGGTATTCTATCAGG
CTGGGCTTATTCAGCAATGATGAAAGCAGGCTGGAAGATTACACTTCCTGAACAAGTCCCATCAAATGTTGCTAATCAAT
TCACTTCAATGATTCCAACAGGAGTAATTGTCGTCGCTGCTACGGTTGTCTATGCTTTATTTGATAAGATTGGTCATACC
GATGCAGTAACTTTTATTTATCATTGGTTATCTGTCCCTCTACAAGGTTTAGGCGGCTCATTTGGTGGAATTATTATTAT
CTCACTCTTAGTTCCATTCTTCTGGTTCTTTGGGGTTCATGGTGGAATTATCATGGGAGCAATTACCTCTGCCTTTCTGA
TTCCAAATACCTTTGCCAATGCATCCCTTTATCAATCTCACAAATTGAGTTTAGCTAATGGTGCTCATATTGTGACCAAT
GAATTCTATAATAACTTTATTAATCTTTCGGGGTCAGGAATTACTTTTGGATTAATTATCTTTACGATTTTCTTTGCTCG
TTCAGAACAGATGAAGTCAATTGGTAAAGTAGAGTTAGTCCCAGGTTTATTTAATATCAATGAACCTTTCTTATTTGGAT
TGCCACTTGTTTTAAATCCAGTCCTTGCTCTGCCATTCTTTCTTGTTCCAGTAGTCGTTTCGGCTACGGTTTACGGAGCG
ATTTATTTTCACATTGTTCCGCCAATGAATGGTGTTGCCGCGCCTTGGACCACTCCACCAATTATTTCTGGCTTTTTAAT
CGGAGGCTGGCAATATGCAGTGCTGCAAGTTATTGCGCTTTTAGAATCAATTTTGATTTATCTTCCATTTGCTAAAAAAT
ATGACAAAATGTTGTTAGAACAAGAAGCAAATGCTGAAGTTGAAGAAGTTATTGCTTAG

Upstream 100 bases:

>100_bases
CTAAGTGCTAAAGCACTTGTTGGCAGGGCAAAACATCAGCACAAAAGACAATTTCCTCATTTCAGAACAGTCGGACTCAC
ATCTTAAAGGAGGTTTATTT

Downstream 100 bases:

>100_bases
TAATTGAATAAGGAGATTAGAAACTCCGGAGAAACTTTTTCTTCGGGATTTCTTTTTATAAAATTAAAGATAAAAGGGGA
CAAAATGGAAAATAAAATGC

Product: cellobiose-specific PTS system IIC component

Products: pyruvate; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm] [C]

Alternate protein names: Putative PTS system EIIC component [H]

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNGFINNKVLPPIMKFVNTRAMTALKNGMLFAMPFIIVGSIFLILANIPIPPVAKWLSDNGWSAIFTQAFNVSFGILAIW
AAVGIGYSYVKEAGFGDVALQGGLTSLSAFFIVQSLSIANPITAALATGKEASGIGNLTGTQATAAFEKLPHAMQVFLNN
PVTGVLNLTWNGGQGMIAAIIIGILSGWAYSAMMKAGWKITLPEQVPSNVANQFTSMIPTGVIVVAATVVYALFDKIGHT
DAVTFIYHWLSVPLQGLGGSFGGIIIISLLVPFFWFFGVHGGIIMGAITSAFLIPNTFANASLYQSHKLSLANGAHIVTN
EFYNNFINLSGSGITFGLIIFTIFFARSEQMKSIGKVELVPGLFNINEPFLFGLPLVLNPVLALPFFLVPVVVSATVYGA
IYFHIVPPMNGVAAPWTTPPIISGFLIGGWQYAVLQVIALLESILIYLPFAKKYDKMLLEQEANAEVEEVIA

Sequences:

>Translated_472_residues
MNGFINNKVLPPIMKFVNTRAMTALKNGMLFAMPFIIVGSIFLILANIPIPPVAKWLSDNGWSAIFTQAFNVSFGILAIW
AAVGIGYSYVKEAGFGDVALQGGLTSLSAFFIVQSLSIANPITAALATGKEASGIGNLTGTQATAAFEKLPHAMQVFLNN
PVTGVLNLTWNGGQGMIAAIIIGILSGWAYSAMMKAGWKITLPEQVPSNVANQFTSMIPTGVIVVAATVVYALFDKIGHT
DAVTFIYHWLSVPLQGLGGSFGGIIIISLLVPFFWFFGVHGGIIMGAITSAFLIPNTFANASLYQSHKLSLANGAHIVTN
EFYNNFINLSGSGITFGLIIFTIFFARSEQMKSIGKVELVPGLFNINEPFLFGLPLVLNPVLALPFFLVPVVVSATVYGA
IYFHIVPPMNGVAAPWTTPPIISGFLIGGWQYAVLQVIALLESILIYLPFAKKYDKMLLEQEANAEVEEVIA
>Mature_472_residues
MNGFINNKVLPPIMKFVNTRAMTALKNGMLFAMPFIIVGSIFLILANIPIPPVAKWLSDNGWSAIFTQAFNVSFGILAIW
AAVGIGYSYVKEAGFGDVALQGGLTSLSAFFIVQSLSIANPITAALATGKEASGIGNLTGTQATAAFEKLPHAMQVFLNN
PVTGVLNLTWNGGQGMIAAIIIGILSGWAYSAMMKAGWKITLPEQVPSNVANQFTSMIPTGVIVVAATVVYALFDKIGHT
DAVTFIYHWLSVPLQGLGGSFGGIIIISLLVPFFWFFGVHGGIIMGAITSAFLIPNTFANASLYQSHKLSLANGAHIVTN
EFYNNFINLSGSGITFGLIIFTIFFARSEQMKSIGKVELVPGLFNINEPFLFGLPLVLNPVLALPFFLVPVVVSATVYGA
IYFHIVPPMNGVAAPWTTPPIISGFLIGGWQYAVLQVIALLESILIYLPFAKKYDKMLLEQEANAEVEEVIA

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]

COG id: COG1455

COG function: function code G; Phosphotransferase system cellobiose-specific component IIC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788032, Length=492, Percent_Identity=28.0487804878049, Blast_Score=171, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003352
- InterPro:   IPR004796
- InterPro:   IPR004501 [H]

Pfam domain/function: PF02378 PTS_EIIC [H]

EC number: NA

Molecular weight: Translated: 50594; Mature: 50594

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS51105 PTS_EIIC_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFINNKVLPPIMKFVNTRAMTALKNGMLFAMPFIIVGSIFLILANIPIPPVAKWLSDN
CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
GWSAIFTQAFNVSFGILAIWAAVGIGYSYVKEAGFGDVALQGGLTSLSAFFIVQSLSIAN
CCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCC
PITAALATGKEASGIGNLTGTQATAAFEKLPHAMQVFLNNPVTGVLNLTWNGGQGMIAAI
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHH
IIGILSGWAYSAMMKAGWKITLPEQVPSNVANQFTSMIPTGVIVVAATVVYALFDKIGHT
HHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
DAVTFIYHWLSVPLQGLGGSFGGIIIISLLVPFFWFFGVHGGIIMGAITSAFLIPNTFAN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
ASLYQSHKLSLANGAHIVTNEFYNNFINLSGSGITFGLIIFTIFFARSEQMKSIGKVELV
CHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCEEEE
PGLFNINEPFLFGLPLVLNPVLALPFFLVPVVVSATVYGAIYFHIVPPMNGVAAPWTTPP
CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCH
IISGFLIGGWQYAVLQVIALLESILIYLPFAKKYDKMLLEQEANAEVEEVIA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure
MNGFINNKVLPPIMKFVNTRAMTALKNGMLFAMPFIIVGSIFLILANIPIPPVAKWLSDN
CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
GWSAIFTQAFNVSFGILAIWAAVGIGYSYVKEAGFGDVALQGGLTSLSAFFIVQSLSIAN
CCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCC
PITAALATGKEASGIGNLTGTQATAAFEKLPHAMQVFLNNPVTGVLNLTWNGGQGMIAAI
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHH
IIGILSGWAYSAMMKAGWKITLPEQVPSNVANQFTSMIPTGVIVVAATVVYALFDKIGHT
HHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
DAVTFIYHWLSVPLQGLGGSFGGIIIISLLVPFFWFFGVHGGIIMGAITSAFLIPNTFAN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
ASLYQSHKLSLANGAHIVTNEFYNNFINLSGSGITFGLIIFTIFFARSEQMKSIGKVELV
CHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCEEEE
PGLFNINEPFLFGLPLVLNPVLALPFFLVPVVVSATVYGAIYFHIVPPMNGVAAPWTTPP
CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCH
IISGFLIGGWQYAVLQVIALLESILIYLPFAKKYDKMLLEQEANAEVEEVIA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: diacetylchitobiose [Periplasm]; phosphoenolpyruvate; cellobiose [Periplasm] [C]

Specific reaction: phosphoenolpyruvate + diacetylchitobiose [Periplasm] = pyruvate + diacetylchitobiose-6-phosphate [Cytoplasm] phosphoenolpyruvate + cellobiose [Periplasm] = cellobiose-6-phosphate [Cytoplasm] + pyruvate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]