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The map label for this gene is yhcK

Identifier: 15672706

GI number: 15672706

Start: 729487

End: 730284

Strand: Direct

Name: yhcK

Synonym: L129481

Alternate gene names: 15672706

Gene position: 729487-730284 (Clockwise)

Preceding gene: 30024007

Following gene: 15672707

Centisome position: 30.84

GC content: 31.45

Gene sequence:

>798_bases
ATGATTGAATTTCTGCAACTTAGACATCAACTGATTCCATATCTTTATAGTGCTAATTTTATGACTGCTTTTAAAGGAAA
AGCGCTTATTGAACCTATTTATTATGAGTATCCATTGGAAGAAGAAGCTTACAATCATCGAAATCAATATAACTTTGGCG
ACCAATTAATGGTGGCACCAATTACAAAAAAAATGAATTTCAATTTACAGATGGGAAATGTGGAGGTTTGGTTTCCAGAA
GGAATCTGGTATGATTTTTTTACAGGTCAACGCTATGATGGTAATGTTAGCCTTAAAGTATATCGAGAAATCACCGAAAT
ACCCGTTTTTGCTAAAGCAGGAGCTATTATTCCACTAGATAAAAATCCTCTGATAAAAGAAGAAATTCCTAGTGAGATAA
TCTGGAAAATATTTCCAGGTGCTGATGGAGAGTATACTTTATTAGAAGATGATAATGAAACTAAAGCGAAATTTGTAGAG
GGAATTTTTACAATTACAAGTAAACAAGAAACGATGCGTAAGCATACTATTGTTTATGGTGGCAAGGAGATTGTATCTGG
TAAAATAGGAAATTTTTCTATTGATTTAAAAGAAGAAGAAGGACAGTTTGATTGGGATTTTGCTACTTCCCTTTTTAGAA
GGTTAGATATTGCAGAGATTGATTATGAAGAAAAAGACCAAATTTTGCAGAAACTTTCTTTGATTAAAGAATATGATAAA
CAAGTGGCTTATATCAAAACGATTGAAAATGCAGAGTTAGAAGATAGTCTATTTGAATTACTTTATAGTGGAAAATAA

Upstream 100 bases:

>100_bases
ACAATTCGGAGTATTTTCACCTATTAATCGACTTCACTCTTCTAAATCTGAGTTTACTAGCAAAGAGCCTTGACATTTTG
ATAGTGTTATTGAGCAATCA

Downstream 100 bases:

>100_bases
GGAAGAACCTTTGTATAATGAGACTACAGGGCTTCTGATAAAATGACTTACAAAAATGTGAACATCAGTCGCTTCTTGTT
AGAAACGAATATTATGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MIEFLQLRHQLIPYLYSANFMTAFKGKALIEPIYYEYPLEEEAYNHRNQYNFGDQLMVAPITKKMNFNLQMGNVEVWFPE
GIWYDFFTGQRYDGNVSLKVYREITEIPVFAKAGAIIPLDKNPLIKEEIPSEIIWKIFPGADGEYTLLEDDNETKAKFVE
GIFTITSKQETMRKHTIVYGGKEIVSGKIGNFSIDLKEEEGQFDWDFATSLFRRLDIAEIDYEEKDQILQKLSLIKEYDK
QVAYIKTIENAELEDSLFELLYSGK

Sequences:

>Translated_265_residues
MIEFLQLRHQLIPYLYSANFMTAFKGKALIEPIYYEYPLEEEAYNHRNQYNFGDQLMVAPITKKMNFNLQMGNVEVWFPE
GIWYDFFTGQRYDGNVSLKVYREITEIPVFAKAGAIIPLDKNPLIKEEIPSEIIWKIFPGADGEYTLLEDDNETKAKFVE
GIFTITSKQETMRKHTIVYGGKEIVSGKIGNFSIDLKEEEGQFDWDFATSLFRRLDIAEIDYEEKDQILQKLSLIKEYDK
QVAYIKTIENAELEDSLFELLYSGK
>Mature_265_residues
MIEFLQLRHQLIPYLYSANFMTAFKGKALIEPIYYEYPLEEEAYNHRNQYNFGDQLMVAPITKKMNFNLQMGNVEVWFPE
GIWYDFFTGQRYDGNVSLKVYREITEIPVFAKAGAIIPLDKNPLIKEEIPSEIIWKIFPGADGEYTLLEDDNETKAKFVE
GIFTITSKQETMRKHTIVYGGKEIVSGKIGNFSIDLKEEEGQFDWDFATSLFRRLDIAEIDYEEKDQILQKLSLIKEYDK
QVAYIKTIENAELEDSLFELLYSGK

Specific function: Catalyzes the liberation of alpha-xylose from the non- reducing terminal glucose of xyloglucan oligosaccharides. Has high hydrolytic activity on the disaccharide isoprimeverose. Follows a retaining mechanism of substrate hydrolysis [H]

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI66346737, Length=119, Percent_Identity=27.7310924369748, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32563849, Length=157, Percent_Identity=29.9363057324841, Blast_Score=74, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: NA

Molecular weight: Translated: 30979; Mature: 30979

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFLQLRHQLIPYLYSANFMTAFKGKALIEPIYYEYPLEEEAYNHRNQYNFGDQLMVAP
CHHHHHHHHHHHHHHHCCCCCEECCCCHHCCCHHCCCCCCHHHHCCCCCCCCCCEEEEEE
ITKKMNFNLQMGNVEVWFPEGIWYDFFTGQRYDGNVSLKVYREITEIPVFAKAGAIIPLD
ECEEEEEEEEECCEEEEECCCEEEECCCCCEECCCEEEEEEEHHHHCCEEECCCEEEECC
KNPLIKEEIPSEIIWKIFPGADGEYTLLEDDNETKAKFVEGIFTITSKQETMRKHTIVYG
CCCCCHHHCCHHHEEEEECCCCCCEEEEECCCHHHHHHHHHHHEECCCHHHHHHHEEEEC
GKEIVSGKIGNFSIDLKEEEGQFDWDFATSLFRRLDIAEIDYEEKDQILQKLSLIKEYDK
CHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHH
QVAYIKTIENAELEDSLFELLYSGK
HEEEEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIEFLQLRHQLIPYLYSANFMTAFKGKALIEPIYYEYPLEEEAYNHRNQYNFGDQLMVAP
CHHHHHHHHHHHHHHHCCCCCEECCCCHHCCCHHCCCCCCHHHHCCCCCCCCCCEEEEEE
ITKKMNFNLQMGNVEVWFPEGIWYDFFTGQRYDGNVSLKVYREITEIPVFAKAGAIIPLD
ECEEEEEEEEECCEEEEECCCEEEECCCCCEECCCEEEEEEEHHHHCCEEECCCEEEECC
KNPLIKEEIPSEIIWKIFPGADGEYTLLEDDNETKAKFVEGIFTITSKQETMRKHTIVYG
CCCCCHHHCCHHHEEEEECCCCCCEEEEECCCHHHHHHHHHHHEECCCHHHHHHHEEEEC
GKEIVSGKIGNFSIDLKEEEGQFDWDFATSLFRRLDIAEIDYEEKDQILQKLSLIKEYDK
CHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHH
QVAYIKTIENAELEDSLFELLYSGK
HEEEEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10801892; 11427726 [H]