Click here to switch to the map view.

The map label for this gene is ygiK

Identifier: 15672671

GI number: 15672671

Start: 688717

End: 689337

Strand: Direct

Name: ygiK

Synonym: L88730

Alternate gene names: 15672671

Gene position: 688717-689337 (Clockwise)

Preceding gene: 15672670

Following gene: 15672672

Centisome position: 29.11

GC content: 35.91

Gene sequence:

>621_bases
ATGGTAGAAAAGCAAAAAATTAATGAAGTAATTGTGGTAGAGGGACGAGATGACACAGCGAATCTTAAGCGTTATTTTGA
CTGTGAGACCTATGAAACAGGAGGCTCATCTATTGATGACAGAGATTTAGAACGACTAAAGAGGTTAGAAGATAAGCGAG
GAATTATTGTTTTTACTGATCCAGATTTCCAAGGAGAAAGAATTCGTAAAATCATAATGCAAGCCGTTCCAAATGCTAAA
CATGCGTTTTTAAATCGTGATGAGGCAAGACCTAAAGGAAAAGGTTCTTTAGGAGTTGAGCATGCAAATTTTGAAGCACT
GAATCAGGCTTTGGCAGAAGTATTTGGTGGAGAAAAAGTTACTGATGAATTTGGAAGTGCTAAAACGCAAGAACCATCCT
CTGACAGAAGTTCTGTCAGTAAAAAAGAATTACTGACAGAACTGACACAAACTGATTTAATGAGCTTTGGCTTAGTTATG
GCCGCTGACAGTAGAAAACGTCGAGAATTTCTTTGTGAGCAACTCAGAATTGGTTATGCGAATGGAAAACAAATTAAGAA
ACGACTTAACATGTTTAAAATTACAAAAGAACAAATTGAAAATGTAATGAAGAATTACTGA

Upstream 100 bases:

>100_bases
GAGTTTCCACAGATTGAGCAAAAAATAAAAGAATTTAATGTTGAAAGTAAAGTGATTATCCTTAAAAATCGAAAAGATAA
AGAGAAATATTTAGCAAATT

Downstream 100 bases:

>100_bases
CAGAAGATAAATGTCGCTGATAGAATACATCAATGGTTTCTGTCAGTAAAATTTACTGACAGAAACTTAATATCAGTTTT
AAAATACATAAAAAGTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MVEKQKINEVIVVEGRDDTANLKRYFDCETYETGGSSIDDRDLERLKRLEDKRGIIVFTDPDFQGERIRKIIMQAVPNAK
HAFLNRDEARPKGKGSLGVEHANFEALNQALAEVFGGEKVTDEFGSAKTQEPSSDRSSVSKKELLTELTQTDLMSFGLVM
AADSRKRREFLCEQLRIGYANGKQIKKRLNMFKITKEQIENVMKNY

Sequences:

>Translated_206_residues
MVEKQKINEVIVVEGRDDTANLKRYFDCETYETGGSSIDDRDLERLKRLEDKRGIIVFTDPDFQGERIRKIIMQAVPNAK
HAFLNRDEARPKGKGSLGVEHANFEALNQALAEVFGGEKVTDEFGSAKTQEPSSDRSSVSKKELLTELTQTDLMSFGLVM
AADSRKRREFLCEQLRIGYANGKQIKKRLNMFKITKEQIENVMKNY
>Mature_206_residues
MVEKQKINEVIVVEGRDDTANLKRYFDCETYETGGSSIDDRDLERLKRLEDKRGIIVFTDPDFQGERIRKIIMQAVPNAK
HAFLNRDEARPKGKGSLGVEHANFEALNQALAEVFGGEKVTDEFGSAKTQEPSSDRSSVSKKELLTELTQTDLMSFGLVM
AADSRKRREFLCEQLRIGYANGKQIKKRLNMFKITKEQIENVMKNY

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004466
- InterPro:   IPR006171 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 23528; Mature: 23528

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKQKINEVIVVEGRDDTANLKRYFDCETYETGGSSIDDRDLERLKRLEDKRGIIVFTD
CCCHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEC
PDFQGERIRKIIMQAVPNAKHAFLNRDEARPKGKGSLGVEHANFEALNQALAEVFGGEKV
CCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHH
TDEFGSAKTQEPSSDRSSVSKKELLTELTQTDLMSFGLVMAADSRKRREFLCEQLRIGYA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
NGKQIKKRLNMFKITKEQIENVMKNY
CHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVEKQKINEVIVVEGRDDTANLKRYFDCETYETGGSSIDDRDLERLKRLEDKRGIIVFTD
CCCHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEC
PDFQGERIRKIIMQAVPNAKHAFLNRDEARPKGKGSLGVEHANFEALNQALAEVFGGEKV
CCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHH
TDEFGSAKTQEPSSDRSSVSKKELLTELTQTDLMSFGLVMAADSRKRREFLCEQLRIGYA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
NGKQIKKRLNMFKITKEQIENVMKNY
CHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]