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The map label for this gene is ybiB

Identifier: 15672159

GI number: 15672159

Start: 181873

End: 183216

Strand: Direct

Name: ybiB

Synonym: L181858

Alternate gene names: 15672159

Gene position: 181873-183216 (Clockwise)

Preceding gene: 15672158

Following gene: 15672160

Centisome position: 7.69

GC content: 36.16

Gene sequence:

>1344_bases
ATGAATAAACTGCGTATCCTTCATTTGAATGATTTACACTCTCACTTGGAACGTTTCCCTGTGATTGAGCGTTTTTTTGC
TGAAAAATCACATGAAGAAGTTGAAAGTTTGTCTTTCGACTTGGGTGACAATGTGGATCGGGTTCATCCTTTGACGGAGG
CAACAGAGGGACAATTTAATGTTGAATTGATGAATCGTTTAGATTTGACGGCGGCGACAATAGGTAATAATGAGGGATTA
GGACTGACACATGAGATGCTTTCTCATCTCTATGATGAAGCTAATTTTCCTGTTCTCTTGTCAAATTTGGCGACAAATTT
TGCACAATCTGAGCCTTTGATAGTCACGACTTCATTTGGCTTACGAATTGGATTAATTGGTTTGACAGCCCCTTATGTTC
TTGCTTATCCACAGGCGGGCTGGGAATTGTCAGACCCTTTTGTGGTTTTAGATGAACTTTTACCAAAACTGGATTGTGAT
TTTACCATTTTACTTTCTCATTTGGGTAAGAATGTTGATGAGCAAATTGCGAAGGACTATGATGAGATTGACTTGATTAT
TGGAGCTCATACACATCATTTATTTGAACATGGTGCTCAAGTTAATCAAACCCTTCTTGCAGCTGCTGGACGCTACGGCG
AATATGTGGGGCAAATTGATTTAACTTTTAATGAAAATAATCAATTAGTTGATGCACAAATTGAAGCTATAGCAACCAAT
ACGCTTCCTCAAAGAAAATCGGATTTGGTAGAAACCAATGGTTGGGAACTGAGAGGGCATAAACTCTTAGAGGGAACAGT
CGTTGCTGATTTACCTAAAGCCTTACCTAATGTTTTACCGGATTTCAAGGGAAGTCATTATTTGGCAAAAATCTTTGCAG
ATTATGGAAATACAAAACTTTGTCTCATGAATTCCGGTTTGTTGGTGACAGATGAATTACCAAATCATTTAACTTTAGAT
GATTTACATGAATTTTTACCCCATTCGATTCGTTTAGTTCGTTTCACATTTACAGGTGAAGAACTTAGACAAGTTTTGCT
TGAAATTATGGATGTTTCGGATTTCCTTGCCACCCAAAAAATTCAAGGAATGGGTTTTCGTGGAAAAACATTTGGTTCTC
TTATATTTCATGGAATTGAGCCACGCGAAGGTGATTTTTACATAAAAAATTCGGAAAATCAGTCACTTGAAAAAATTTCT
GATGAAGAGAGTTATCAAATTGTTTTACCTGACCAATATTTGTTTGCTTGGTATTTCCCTTTATTGAAAAAATTGGGAAA
ATCAGAAATTTTATTCCCTTATTTCTTACGGGAAATTGTAGCAGAACATTTTAAAAATAAATAG

Upstream 100 bases:

>100_bases
AGATACTATAGCAATCTTAAGTTTCACTTGCTTATAAATTAGGCGAAAGCTAGTAAGACGAAATATTGTTTAGCCTTAGT
AGCTATGCTATAATAGTATT

Downstream 100 bases:

>100_bases
AAATAGAAAAATTAATGGCTAAAGTAATAGACGAAAGTAAGTTAAATTATAATAAATATCCTGGCGAACATGTTATGGCA
GTAGGGGAAGTTGTTCAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MNKLRILHLNDLHSHLERFPVIERFFAEKSHEEVESLSFDLGDNVDRVHPLTEATEGQFNVELMNRLDLTAATIGNNEGL
GLTHEMLSHLYDEANFPVLLSNLATNFAQSEPLIVTTSFGLRIGLIGLTAPYVLAYPQAGWELSDPFVVLDELLPKLDCD
FTILLSHLGKNVDEQIAKDYDEIDLIIGAHTHHLFEHGAQVNQTLLAAAGRYGEYVGQIDLTFNENNQLVDAQIEAIATN
TLPQRKSDLVETNGWELRGHKLLEGTVVADLPKALPNVLPDFKGSHYLAKIFADYGNTKLCLMNSGLLVTDELPNHLTLD
DLHEFLPHSIRLVRFTFTGEELRQVLLEIMDVSDFLATQKIQGMGFRGKTFGSLIFHGIEPREGDFYIKNSENQSLEKIS
DEESYQIVLPDQYLFAWYFPLLKKLGKSEILFPYFLREIVAEHFKNK

Sequences:

>Translated_447_residues
MNKLRILHLNDLHSHLERFPVIERFFAEKSHEEVESLSFDLGDNVDRVHPLTEATEGQFNVELMNRLDLTAATIGNNEGL
GLTHEMLSHLYDEANFPVLLSNLATNFAQSEPLIVTTSFGLRIGLIGLTAPYVLAYPQAGWELSDPFVVLDELLPKLDCD
FTILLSHLGKNVDEQIAKDYDEIDLIIGAHTHHLFEHGAQVNQTLLAAAGRYGEYVGQIDLTFNENNQLVDAQIEAIATN
TLPQRKSDLVETNGWELRGHKLLEGTVVADLPKALPNVLPDFKGSHYLAKIFADYGNTKLCLMNSGLLVTDELPNHLTLD
DLHEFLPHSIRLVRFTFTGEELRQVLLEIMDVSDFLATQKIQGMGFRGKTFGSLIFHGIEPREGDFYIKNSENQSLEKIS
DEESYQIVLPDQYLFAWYFPLLKKLGKSEILFPYFLREIVAEHFKNK
>Mature_447_residues
MNKLRILHLNDLHSHLERFPVIERFFAEKSHEEVESLSFDLGDNVDRVHPLTEATEGQFNVELMNRLDLTAATIGNNEGL
GLTHEMLSHLYDEANFPVLLSNLATNFAQSEPLIVTTSFGLRIGLIGLTAPYVLAYPQAGWELSDPFVVLDELLPKLDCD
FTILLSHLGKNVDEQIAKDYDEIDLIIGAHTHHLFEHGAQVNQTLLAAAGRYGEYVGQIDLTFNENNQLVDAQIEAIATN
TLPQRKSDLVETNGWELRGHKLLEGTVVADLPKALPNVLPDFKGSHYLAKIFADYGNTKLCLMNSGLLVTDELPNHLTLD
DLHEFLPHSIRLVRFTFTGEELRQVLLEIMDVSDFLATQKIQGMGFRGKTFGSLIFHGIEPREGDFYIKNSENQSLEKIS
DEESYQIVLPDQYLFAWYFPLLKKLGKSEILFPYFLREIVAEHFKNK

Specific function: Unknown

COG id: COG0737

COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008334
- InterPro:   IPR006179
- InterPro:   IPR011240 [H]

Pfam domain/function: PF02872 5_nucleotid_C [H]

EC number: NA

Molecular weight: Translated: 50617; Mature: 50617

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLRILHLNDLHSHLERFPVIERFFAEKSHEEVESLSFDLGDNVDRVHPLTEATEGQFN
CCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHCCCCCCCCCEEE
VELMNRLDLTAATIGNNEGLGLTHEMLSHLYDEANFPVLLSNLATNFAQSEPLIVTTSFG
HHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCC
LRIGLIGLTAPYVLAYPQAGWELSDPFVVLDELLPKLDCDFTILLSHLGKNVDEQIAKDY
CEEEEHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCC
DEIDLIIGAHTHHLFEHGAQVNQTLLAAAGRYGEYVGQIDLTFNENNQLVDAQIEAIATN
CCEEEEEECHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEHHHHHHHHHC
TLPQRKSDLVETNGWELRGHKLLEGTVVADLPKALPNVLPDFKGSHYLAKIFADYGNTKL
CCCCHHHHHHCCCCCEEECCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEE
CLMNSGLLVTDELPNHLTLDDLHEFLPHSIRLVRFTFTGEELRQVLLEIMDVSDFLATQK
EEEECCEEEECCCCCCCCHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IQGMGFRGKTFGSLIFHGIEPREGDFYIKNSENQSLEKISDEESYQIVLPDQYLFAWYFP
HHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCHHHHCCCCCCEEEECCCHHHHHHHHH
LLKKLGKSEILFPYFLREIVAEHFKNK
HHHHCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKLRILHLNDLHSHLERFPVIERFFAEKSHEEVESLSFDLGDNVDRVHPLTEATEGQFN
CCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHCCCCCCCCCEEE
VELMNRLDLTAATIGNNEGLGLTHEMLSHLYDEANFPVLLSNLATNFAQSEPLIVTTSFG
HHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCC
LRIGLIGLTAPYVLAYPQAGWELSDPFVVLDELLPKLDCDFTILLSHLGKNVDEQIAKDY
CEEEEHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCC
DEIDLIIGAHTHHLFEHGAQVNQTLLAAAGRYGEYVGQIDLTFNENNQLVDAQIEAIATN
CCEEEEEECHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEHHHHHHHHHC
TLPQRKSDLVETNGWELRGHKLLEGTVVADLPKALPNVLPDFKGSHYLAKIFADYGNTKL
CCCCHHHHHHCCCCCEEECCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEE
CLMNSGLLVTDELPNHLTLDDLHEFLPHSIRLVRFTFTGEELRQVLLEIMDVSDFLATQK
EEEECCEEEECCCCCCCCHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IQGMGFRGKTFGSLIFHGIEPREGDFYIKNSENQSLEKISDEESYQIVLPDQYLFAWYFP
HHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCHHHHCCCCCCEEEECCCHHHHHHHHH
LLKKLGKSEILFPYFLREIVAEHFKNK
HHHHCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]