| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ybhC
Identifier: 15672153
GI number: 15672153
Start: 174131
End: 174562
Strand: Direct
Name: ybhC
Synonym: L174251
Alternate gene names: NA
Gene position: 174131-174562 (Clockwise)
Preceding gene: 15672152
Following gene: 15672154
Centisome position: 7.36
GC content: 35.19
Gene sequence:
>432_bases ATGAGAATTGATAAAATAGTTGATGCCCCGAGAGAATTTATCTTTGAAAAAATAATTGATTCATGTCTATTTGACATTGA AAAAAATACAGGGAAACGTCCGAAAGTTAGAAGCTTAAATGGTTATGAATATAGTAAGAGCTTTGGGAAAAACCAAAGAG GAAGTATTAAAATTACAGAGCTGACAGAACCAAGCATTTACGCTTTTACGACTAAAACAAATCGCAATACTTTTAGTACT CGCTGGGAATTGCATAAAATTGATGACCGAAGCACTCAGGTGGTCATTGAAGAGCACCAAACATCAAATGGTTTTATTCA AATGATTAACGACAAAGCCGTTGGTTTTTTCTTGGGACGTTTTAAAAAGCGCCAAATGGTTGCTGTTTTGGATAATGTCA ATCGAGCTTACAATGGCGGTAGAGCAAGATAA
Upstream 100 bases:
>100_bases AAAATATGTTTTGCTTTTGAAAACATGAAAGTGCTTGCAAAGAATCTTTAATCTTGTTAGAATAAACTTAGTTAAAAAAC TTGCTGAGGGAGAAAAAAAG
Downstream 100 bases:
>100_bases GTAAAGTGTCAGACAATGAAAATTTTAAGACTTTCAGATTTACAAAGAAATAAGTTGTTTTCATGCGCTTTATTTTCAGT GATAAGCTAGGCGGAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRIDKIVDAPREFIFEKIIDSCLFDIEKNTGKRPKVRSLNGYEYSKSFGKNQRGSIKITELTEPSIYAFTTKTNRNTFST RWELHKIDDRSTQVVIEEHQTSNGFIQMINDKAVGFFLGRFKKRQMVAVLDNVNRAYNGGRAR
Sequences:
>Translated_143_residues MRIDKIVDAPREFIFEKIIDSCLFDIEKNTGKRPKVRSLNGYEYSKSFGKNQRGSIKITELTEPSIYAFTTKTNRNTFST RWELHKIDDRSTQVVIEEHQTSNGFIQMINDKAVGFFLGRFKKRQMVAVLDNVNRAYNGGRAR >Mature_143_residues MRIDKIVDAPREFIFEKIIDSCLFDIEKNTGKRPKVRSLNGYEYSKSFGKNQRGSIKITELTEPSIYAFTTKTNRNTFST RWELHKIDDRSTQVVIEEHQTSNGFIQMINDKAVGFFLGRFKKRQMVAVLDNVNRAYNGGRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16630; Mature: 16630
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDKIVDAPREFIFEKIIDSCLFDIEKNTGKRPKVRSLNGYEYSKSFGKNQRGSIKITE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEE LTEPSIYAFTTKTNRNTFSTRWELHKIDDRSTQVVIEEHQTSNGFIQMINDKAVGFFLGR ECCCCEEEEEECCCCCEECCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHH FKKRQMVAVLDNVNRAYNGGRAR HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRIDKIVDAPREFIFEKIIDSCLFDIEKNTGKRPKVRSLNGYEYSKSFGKNQRGSIKITE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEE LTEPSIYAFTTKTNRNTFSTRWELHKIDDRSTQVVIEEHQTSNGFIQMINDKAVGFFLGR ECCCCEEEEEECCCCCEECCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHH FKKRQMVAVLDNVNRAYNGGRAR HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA