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The map label for this gene is lcnD

Identifier: 15672062

GI number: 15672062

Start: 84738

End: 86159

Strand: Direct

Name: lcnD

Synonym: L84721

Alternate gene names: 15672062

Gene position: 84738-86159 (Clockwise)

Preceding gene: 15672061

Following gene: 15672063

Centisome position: 3.58

GC content: 35.58

Gene sequence:

>1422_bases
ATGTTTGATAAAAAATTACTGGAAAGTTCAGAGCTTTATGATAAACGCTATCGAAATTTCTCAACCTTAATTATTCTTCC
ACTTTTTATCCTTCTTGTTGGGGGGGTAATTTTTACTTTCTTTGCACATAAGGAGTTGACCGTCATCAGTACAGGAAGTA
TTGAACCTACAAAAATAGTTGCTAAAATTCAATCAACGAATGCCAATCCAATCATTGAAAACAACCTCAAAGAAGGCAAA
GTAGTTAAAGAAAATAGCCTACTTCTTAAATATAATGGCACACCAGAACAGACCCAACTCAGTGAGCTACTGACTCAAAA
GAAACAAGTGCTAGACAAAAAAGCACAGCTTGACCTCCTTCAAAAGAGTTTAACCAACGAAAAAAATGAGTTTCCCACTA
CCGATAGTTTTGGCTATGAGAAAAGTTTTGAAAATTATGAATCACAAGTAAAAAGTCTTGAAGCAACCATTCAAAAATCG
AATCAAGCGGTAGAAGACCAAAATAAAAGTACCGAGAGTCAAAAGCAAGCTATTCAAAATCAGGTGGCAACACTCCAACA
GGCTATTCAGAATTACTCTGAAATCGAAAATGCGGTATCGAGTGGTGGTGGAGTTTCACAAGATAATCCCTACCTCTCTC
AATATAACAGTTACCAAGCGCAACAAGCGACTTTAGAGGCCGATTTAAAAAATCAAAAAAATCCAGATGAAACTGCTAAG
CAAGCGACTAAAAGTCAAGAGGAGTCTTTAAAAAGTCAATTTTTATCAGGTTTAGCTTCGAGTAAAGACAGCTTAAAAAG
CCAAATTCAATCCTTTAATGTGCAAGAAAGTAGCTTAACAGGAAGTAATGCTTATGATAATAGCCAATCTAGTCAAATCT
TAACTTTAAAAACCCAGGCACTTTCAGCTTCAAATAAAGAAATGACAGACCTAAATAGTACCCTTACTGATTTAGAAACA
AAAATTAGCTTGCAAAAACAAGATGACCAGTACAGTCAAGTTTTTGCGGAACAGACTGGAGTCCTGCATGTGCTCCCAGA
TATTTTAGGGATGAAAAAGATTCCGATTGGAACACCTATCGCAGAAATCTATCCTTTATTAAAGGCAGAAACACAAGTTA
ATCTGACAAGTTATATCCCAAGTACTCAAATTTCTGGAATGAAAGTCGGTCAAAAAGTTAGATTTACAGTACAGCAAAAT
TTACCTAAACCAGAGATATTAACTGGTATCATTAAACAAATTGATAGCGCCCCAACCGCCTTTAAAGAGGGAAATGCTTA
TAAAGTTTCTGCGACAACCGCTATCAATGCAAAAGACCTCCCAAATATAAGGTATGGCTTGCAAGGAAAAACGGTGACCA
TTATTGGAAAGAAAACTTATTTCAATTACTTTTTAGATAAAATTATGGGGAGGACTTCATAA

Upstream 100 bases:

>100_bases
TTGAACAAGGAAAAGTGATAGAAAGTGGTTCACATTCAGAACTGCTTGCTCAAAATGGCTTTTACGCACAACTTTACCAT
AACTAAGTCAGGAGAAAAAG

Downstream 100 bases:

>100_bases
TTTAAGGGCTTCATTTGTAATTGTGCGAAAATTCTTGCATTTATGTTTTTTTCGGAGTATACTGACATTATTAAAATATA
AGGAGATTTACAAATGAAAA

Product: lactococcin A ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MFDKKLLESSELYDKRYRNFSTLIILPLFILLVGGVIFTFFAHKELTVISTGSIEPTKIVAKIQSTNANPIIENNLKEGK
VVKENSLLLKYNGTPEQTQLSELLTQKKQVLDKKAQLDLLQKSLTNEKNEFPTTDSFGYEKSFENYESQVKSLEATIQKS
NQAVEDQNKSTESQKQAIQNQVATLQQAIQNYSEIENAVSSGGGVSQDNPYLSQYNSYQAQQATLEADLKNQKNPDETAK
QATKSQEESLKSQFLSGLASSKDSLKSQIQSFNVQESSLTGSNAYDNSQSSQILTLKTQALSASNKEMTDLNSTLTDLET
KISLQKQDDQYSQVFAEQTGVLHVLPDILGMKKIPIGTPIAEIYPLLKAETQVNLTSYIPSTQISGMKVGQKVRFTVQQN
LPKPEILTGIIKQIDSAPTAFKEGNAYKVSATTAINAKDLPNIRYGLQGKTVTIIGKKTYFNYFLDKIMGRTS

Sequences:

>Translated_473_residues
MFDKKLLESSELYDKRYRNFSTLIILPLFILLVGGVIFTFFAHKELTVISTGSIEPTKIVAKIQSTNANPIIENNLKEGK
VVKENSLLLKYNGTPEQTQLSELLTQKKQVLDKKAQLDLLQKSLTNEKNEFPTTDSFGYEKSFENYESQVKSLEATIQKS
NQAVEDQNKSTESQKQAIQNQVATLQQAIQNYSEIENAVSSGGGVSQDNPYLSQYNSYQAQQATLEADLKNQKNPDETAK
QATKSQEESLKSQFLSGLASSKDSLKSQIQSFNVQESSLTGSNAYDNSQSSQILTLKTQALSASNKEMTDLNSTLTDLET
KISLQKQDDQYSQVFAEQTGVLHVLPDILGMKKIPIGTPIAEIYPLLKAETQVNLTSYIPSTQISGMKVGQKVRFTVQQN
LPKPEILTGIIKQIDSAPTAFKEGNAYKVSATTAINAKDLPNIRYGLQGKTVTIIGKKTYFNYFLDKIMGRTS
>Mature_473_residues
MFDKKLLESSELYDKRYRNFSTLIILPLFILLVGGVIFTFFAHKELTVISTGSIEPTKIVAKIQSTNANPIIENNLKEGK
VVKENSLLLKYNGTPEQTQLSELLTQKKQVLDKKAQLDLLQKSLTNEKNEFPTTDSFGYEKSFENYESQVKSLEATIQKS
NQAVEDQNKSTESQKQAIQNQVATLQQAIQNYSEIENAVSSGGGVSQDNPYLSQYNSYQAQQATLEADLKNQKNPDETAK
QATKSQEESLKSQFLSGLASSKDSLKSQIQSFNVQESSLTGSNAYDNSQSSQILTLKTQALSASNKEMTDLNSTLTDLET
KISLQKQDDQYSQVFAEQTGVLHVLPDILGMKKIPIGTPIAEIYPLLKAETQVNLTSYIPSTQISGMKVGQKVRFTVQQN
LPKPEILTGIIKQIDSAPTAFKEGNAYKVSATTAINAKDLPNIRYGLQGKTVTIIGKKTYFNYFLDKIMGRTS

Specific function: Involved in the secretion of lactococcin A [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005696
- InterPro:   IPR006143
- InterPro:   IPR006144 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 52515; Mature: 52515

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00543 HLYD_FAMILY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDKKLLESSELYDKRYRNFSTLIILPLFILLVGGVIFTFFAHKELTVISTGSIEPTKIV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
AKIQSTNANPIIENNLKEGKVVKENSLLLKYNGTPEQTQLSELLTQKKQVLDKKAQLDLL
HHHHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKSLTNEKNEFPTTDSFGYEKSFENYESQVKSLEATIQKSNQAVEDQNKSTESQKQAIQN
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QVATLQQAIQNYSEIENAVSSGGGVSQDNPYLSQYNSYQAQQATLEADLKNQKNPDETAK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH
QATKSQEESLKSQFLSGLASSKDSLKSQIQSFNVQESSLTGSNAYDNSQSSQILTLKTQA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEEHHH
LSASNKEMTDLNSTLTDLETKISLQKQDDQYSQVFAEQTGVLHVLPDILGMKKIPIGTPI
HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCH
AEIYPLLKAETQVNLTSYIPSTQISGMKVGQKVRFTVQQNLPKPEILTGIIKQIDSAPTA
HHHHHHHHHCCCEEHHHHCCCCCCCCHHCCCCEEEEHHCCCCCHHHHHHHHHHHCCCCCH
FKEGNAYKVSATTAINAKDLPNIRYGLQGKTVTIIGKKTYFNYFLDKIMGRTS
HCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFDKKLLESSELYDKRYRNFSTLIILPLFILLVGGVIFTFFAHKELTVISTGSIEPTKIV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
AKIQSTNANPIIENNLKEGKVVKENSLLLKYNGTPEQTQLSELLTQKKQVLDKKAQLDLL
HHHHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKSLTNEKNEFPTTDSFGYEKSFENYESQVKSLEATIQKSNQAVEDQNKSTESQKQAIQN
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QVATLQQAIQNYSEIENAVSSGGGVSQDNPYLSQYNSYQAQQATLEADLKNQKNPDETAK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH
QATKSQEESLKSQFLSGLASSKDSLKSQIQSFNVQESSLTGSNAYDNSQSSQILTLKTQA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEEHHH
LSASNKEMTDLNSTLTDLETKISLQKQDDQYSQVFAEQTGVLHVLPDILGMKKIPIGTPI
HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCH
AEIYPLLKAETQVNLTSYIPSTQISGMKVGQKVRFTVQQNLPKPEILTGIIKQIDSAPTA
HHHHHHHHHCCCEEHHHHCCCCCCCCHHCCCCEEEEHHCCCCCHHHHHHHHHHHCCCCCH
FKEGNAYKVSATTAINAKDLPNIRYGLQGKTVTIIGKKTYFNYFLDKIMGRTS
HCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1622271; 8626308 [H]