| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yaiA
Identifier: 15672059
GI number: 15672059
Start: 80208
End: 81377
Strand: Direct
Name: yaiA
Synonym: L80191
Alternate gene names: 15672059
Gene position: 80208-81377 (Clockwise)
Preceding gene: 15672058
Following gene: 15672060
Centisome position: 3.39
GC content: 38.72
Gene sequence:
>1170_bases ATGGCTGAATTAACAAAAATTGAAACAAAAATACCTGAAAATCTTACTCTTGGTGGTGTTCACCACGTAACAGCAATCAC CTCAAGTGCTCAAAAAATCTATGATTTTTTCACAAATATCTTGGGTCTGCGTTTAGCAAAATTAACAGTCAATCAAGATG ACTATGAAACTTATCACCTCTTTTTCACAGAAGAAGATGGGCATGGAGCTGATATGACTTTCTTTGATTTCAAAGATATT CCTAAAGGAAATCATGGGGTTAATAATATCGAACGTGCTTCATTCCGTGTACCGACAGATGCATCCTTAGATTATTGGAC CCGTCGTTTTGACAATGCCCATGTTAAACATGGCGAAATTTCTAGTAAATTTGGTCAAAAAACCTTAGAGTTCGAAGATT TTGATGGTCAATTATATCAATTGATTTCTGACCAAAATAATAGTGGGGATGATTCAAAAGGACGTTCTTGGCAACTTTCA AATGTTCCACAAGAGCATGGAATTACTGGACTTGGCCCAGTTTTTGTAAAAGTTGAAAATGCTGAAAATCTTCGGACCAT TTTGGAAACAGTTTTTGGCTTCCGTTACGCTGGTCAAGAAGATGATTTACATCTTTTTGAAGTGGCGAATGGTGGAAATG GAGCAGCTTTGATTCTTCAAGAAGCTGGTGAAAAAGAAGCTTACGCTTATCAAGGTTATGGTACGATTCATCATTTAGCT CTGGGAACAGCAAATCCTGAAACTTTAAACTATTGGATTGAACGCATTAAGGCTTTCCGTTTGCCACATTCTGGTTTGGT TGATCGTTTCTATTTCTCAAGTGAATATGTCAGAGTAGCACCAGGAGTTCTCTTTGAAATTGCGACTTACACACCAGGGA TTGGGGCATTGGACATGGCAAAATCAGGTCTAGGAGCTGTTGATTCTTATGAAGAAGCTTTAATTACTTCTGGTTTCTGG ATTGACCAAACTAAGGAAGAATCAGGTTTATCTTTGAGCTTACCTCCTCATTTATTCCCCGGAGATGAAGCTACTAAAGC GAGAACAGCCGCAAGTTTACGTCCATTGGACACTTCAGATGCTCATCGTGACCGCACAAAAGATGAACTATGGACTGTTG AAAAAGTATTGGAACACAAAGCTGGAACTCCGGCTGAAACAGTGCAATAA
Upstream 100 bases:
>100_bases TGCAAGAGGAAGTTTTAGCCGCTAATAAATGGCTTACAGAAACAAAATAATTTTGTATTGAAAAAGTTTCAGTGCAAAGT AACTAAATAGGAGAAAACAA
Downstream 100 bases:
>100_bases AGGAGAACTGATGAAATCATATCAAGCAAATGAGCTCGACGAAAAAACAGTCTATAAACTTCTGTCAGGCAGTATTGTTC CACGCCCAATTGCTTGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MAELTKIETKIPENLTLGGVHHVTAITSSAQKIYDFFTNILGLRLAKLTVNQDDYETYHLFFTEEDGHGADMTFFDFKDI PKGNHGVNNIERASFRVPTDASLDYWTRRFDNAHVKHGEISSKFGQKTLEFEDFDGQLYQLISDQNNSGDDSKGRSWQLS NVPQEHGITGLGPVFVKVENAENLRTILETVFGFRYAGQEDDLHLFEVANGGNGAALILQEAGEKEAYAYQGYGTIHHLA LGTANPETLNYWIERIKAFRLPHSGLVDRFYFSSEYVRVAPGVLFEIATYTPGIGALDMAKSGLGAVDSYEEALITSGFW IDQTKEESGLSLSLPPHLFPGDEATKARTAASLRPLDTSDAHRDRTKDELWTVEKVLEHKAGTPAETVQ
Sequences:
>Translated_389_residues MAELTKIETKIPENLTLGGVHHVTAITSSAQKIYDFFTNILGLRLAKLTVNQDDYETYHLFFTEEDGHGADMTFFDFKDI PKGNHGVNNIERASFRVPTDASLDYWTRRFDNAHVKHGEISSKFGQKTLEFEDFDGQLYQLISDQNNSGDDSKGRSWQLS NVPQEHGITGLGPVFVKVENAENLRTILETVFGFRYAGQEDDLHLFEVANGGNGAALILQEAGEKEAYAYQGYGTIHHLA LGTANPETLNYWIERIKAFRLPHSGLVDRFYFSSEYVRVAPGVLFEIATYTPGIGALDMAKSGLGAVDSYEEALITSGFW IDQTKEESGLSLSLPPHLFPGDEATKARTAASLRPLDTSDAHRDRTKDELWTVEKVLEHKAGTPAETVQ >Mature_388_residues AELTKIETKIPENLTLGGVHHVTAITSSAQKIYDFFTNILGLRLAKLTVNQDDYETYHLFFTEEDGHGADMTFFDFKDIP KGNHGVNNIERASFRVPTDASLDYWTRRFDNAHVKHGEISSKFGQKTLEFEDFDGQLYQLISDQNNSGDDSKGRSWQLSN VPQEHGITGLGPVFVKVENAENLRTILETVFGFRYAGQEDDLHLFEVANGGNGAALILQEAGEKEAYAYQGYGTIHHLAL GTANPETLNYWIERIKAFRLPHSGLVDRFYFSSEYVRVAPGVLFEIATYTPGIGALDMAKSGLGAVDSYEEALITSGFWI DQTKEESGLSLSLPPHLFPGDEATKARTAASLRPLDTSDAHRDRTKDELWTVEKVLEHKAGTPAETVQ
Specific function: Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 43315; Mature: 43183
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELTKIETKIPENLTLGGVHHVTAITSSAQKIYDFFTNILGLRLAKLTVNQDDYETYHL CCCCHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEE FFTEEDGHGADMTFFDFKDIPKGNHGVNNIERASFRVPTDASLDYWTRRFDNAHVKHGEI EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCH SSKFGQKTLEFEDFDGQLYQLISDQNNSGDDSKGRSWQLSNVPQEHGITGLGPVFVKVEN HHHHCCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHCCCCCCEEEEEEEC AENLRTILETVFGFRYAGQEDDLHLFEVANGGNGAALILQEAGEKEAYAYQGYGTIHHLA HHHHHHHHHHHHCCEECCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEECCCCCEEEEE LGTANPETLNYWIERIKAFRLPHSGLVDRFYFSSEYVRVAPGVLFEIATYTPGIGALDMA ECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCCCCCHHHHH KSGLGAVDSYEEALITSGFWIDQTKEESGLSLSLPPHLFPGDEATKARTAASLRPLDTSD HCCCCCCHHHHHHHHHCCCEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCC AHRDRTKDELWTVEKVLEHKAGTPAETVQ CHHCCCHHHHHHHHHHHHHCCCCCHHCCC >Mature Secondary Structure AELTKIETKIPENLTLGGVHHVTAITSSAQKIYDFFTNILGLRLAKLTVNQDDYETYHL CCCHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEE FFTEEDGHGADMTFFDFKDIPKGNHGVNNIERASFRVPTDASLDYWTRRFDNAHVKHGEI EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCH SSKFGQKTLEFEDFDGQLYQLISDQNNSGDDSKGRSWQLSNVPQEHGITGLGPVFVKVEN HHHHCCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHCCCCCCEEEEEEEC AENLRTILETVFGFRYAGQEDDLHLFEVANGGNGAALILQEAGEKEAYAYQGYGTIHHLA HHHHHHHHHHHHCCEECCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEECCCCCEEEEE LGTANPETLNYWIERIKAFRLPHSGLVDRFYFSSEYVRVAPGVLFEIATYTPGIGALDMA ECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCCCCCHHHHH KSGLGAVDSYEEALITSGFWIDQTKEESGLSLSLPPHLFPGDEATKARTAASLRPLDTSD HCCCCCCHHHHHHHHHCCCEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCC AHRDRTKDELWTVEKVLEHKAGTPAETVQ CHHCCCHHHHHHHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]