Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

Click here to switch to the map view.

The map label for this gene is yahB

Identifier: 15672057

GI number: 15672057

Start: 78713

End: 79180

Strand: Direct

Name: yahB

Synonym: L1010

Alternate gene names: NA

Gene position: 78713-79180 (Clockwise)

Preceding gene: 15672051

Following gene: 30023973

Centisome position: 3.33

GC content: 38.03

Gene sequence:

>468_bases
ATGAGTAAAAATTATAAAAAAATCCTAGTCGCAATTGATGGATCTGAGCAGGCAGAAGAAGCGTTAAAAGAAGCTATTGT
CCTTGCTAAAAGAGACAACTCACAATTATTCGTTTTACATGCGACGGATAAAAACAGTATTTATGCAGCTGGTAACCCAG
TTCCTGTGGTTCCTGCACCAGCTATTCCAGTAGTTCCAGCAGTTCCCGTACTTGAAGAAAGTGCAGATAATGAAGCTAAA
GAAGTTTTAGACAAAGCTTTGGCAATTATCAATAATGAAGTGAAGTTTGAAGAAATTCGAGTTGATGGTTCGGCAAAAAA
TGAAATTGTCGATTTCGCTAAAGAACATGAAATTGATATGATTGTGATGGGCTCTTCAGGAAAAGGCGCTCTTGACCGAA
TGTTGCTTGGCTCTACAGCAGTTTACGTGGTTAAACATGCACCTTGTAGTGTAACAATCATCAAATAA

Upstream 100 bases:

>100_bases
AAGTGATTTTTTATAAATGGTTTATAGAATAAATTGTACAGCGTTTAATTGGACTTGCTCTCTGAAATAACGTAAAATTG
TAGTGAGGAGGACGGTTACA

Downstream 100 bases:

>100_bases
ATTAGATAAATTTCAAGAATCGGCAAGCATTTGCCGATTTTTTTTGTATTTTAAAAATAAATTCCTTGACAATGAAATTC
TTTTCGTTTACAATTGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDKNSIYAAGNPVPVVPAPAIPVVPAVPVLEESADNEAK
EVLDKALAIINNEVKFEEIRVDGSAKNEIVDFAKEHEIDMIVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK

Sequences:

>Translated_155_residues
MSKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDKNSIYAAGNPVPVVPAPAIPVVPAVPVLEESADNEAK
EVLDKALAIINNEVKFEEIRVDGSAKNEIVDFAKEHEIDMIVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK
>Mature_154_residues
SKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDKNSIYAAGNPVPVVPAPAIPVVPAVPVLEESADNEAKE
VLDKALAIINNEVKFEEIRVDGSAKNEIVDFAKEHEIDMIVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16635; Mature: 16504

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDKNSIYAAGNPVPVVPAP
CCCCCEEEEEEECCCHHHHHHHHHHEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCC
AIPVVPAVPVLEESADNEAKEVLDKALAIINNEVKFEEIRVDGSAKNEIVDFAKEHEIDM
CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCEEE
IVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK
EEECCCCCCHHHHHHHCCEEEEEEEECCEEEEEEC
>Mature Secondary Structure 
SKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDKNSIYAAGNPVPVVPAP
CCCCEEEEEEECCCHHHHHHHHHHEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCC
AIPVVPAVPVLEESADNEAKEVLDKALAIINNEVKFEEIRVDGSAKNEIVDFAKEHEIDM
CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCEEE
IVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK
EEECCCCCCHHHHHHHCCEEEEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]