| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yahB
Identifier: 15672057
GI number: 15672057
Start: 78713
End: 79180
Strand: Direct
Name: yahB
Synonym: L1010
Alternate gene names: NA
Gene position: 78713-79180 (Clockwise)
Preceding gene: 15672051
Following gene: 30023973
Centisome position: 3.33
GC content: 38.03
Gene sequence:
>468_bases ATGAGTAAAAATTATAAAAAAATCCTAGTCGCAATTGATGGATCTGAGCAGGCAGAAGAAGCGTTAAAAGAAGCTATTGT CCTTGCTAAAAGAGACAACTCACAATTATTCGTTTTACATGCGACGGATAAAAACAGTATTTATGCAGCTGGTAACCCAG TTCCTGTGGTTCCTGCACCAGCTATTCCAGTAGTTCCAGCAGTTCCCGTACTTGAAGAAAGTGCAGATAATGAAGCTAAA GAAGTTTTAGACAAAGCTTTGGCAATTATCAATAATGAAGTGAAGTTTGAAGAAATTCGAGTTGATGGTTCGGCAAAAAA TGAAATTGTCGATTTCGCTAAAGAACATGAAATTGATATGATTGTGATGGGCTCTTCAGGAAAAGGCGCTCTTGACCGAA TGTTGCTTGGCTCTACAGCAGTTTACGTGGTTAAACATGCACCTTGTAGTGTAACAATCATCAAATAA
Upstream 100 bases:
>100_bases AAGTGATTTTTTATAAATGGTTTATAGAATAAATTGTACAGCGTTTAATTGGACTTGCTCTCTGAAATAACGTAAAATTG TAGTGAGGAGGACGGTTACA
Downstream 100 bases:
>100_bases ATTAGATAAATTTCAAGAATCGGCAAGCATTTGCCGATTTTTTTTGTATTTTAAAAATAAATTCCTTGACAATGAAATTC TTTTCGTTTACAATTGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDKNSIYAAGNPVPVVPAPAIPVVPAVPVLEESADNEAK EVLDKALAIINNEVKFEEIRVDGSAKNEIVDFAKEHEIDMIVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK
Sequences:
>Translated_155_residues MSKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDKNSIYAAGNPVPVVPAPAIPVVPAVPVLEESADNEAK EVLDKALAIINNEVKFEEIRVDGSAKNEIVDFAKEHEIDMIVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK >Mature_154_residues SKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDKNSIYAAGNPVPVVPAPAIPVVPAVPVLEESADNEAKE VLDKALAIINNEVKFEEIRVDGSAKNEIVDFAKEHEIDMIVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 16635; Mature: 16504
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDKNSIYAAGNPVPVVPAP CCCCCEEEEEEECCCHHHHHHHHHHEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCC AIPVVPAVPVLEESADNEAKEVLDKALAIINNEVKFEEIRVDGSAKNEIVDFAKEHEIDM CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCEEE IVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK EEECCCCCCHHHHHHHCCEEEEEEEECCEEEEEEC >Mature Secondary Structure SKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDKNSIYAAGNPVPVVPAP CCCCEEEEEEECCCHHHHHHHHHHEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCC AIPVVPAVPVLEESADNEAKEVLDKALAIINNEVKFEEIRVDGSAKNEIVDFAKEHEIDM CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCEEE IVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK EEECCCCCCHHHHHHHCCEEEEEEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]