| Definition | Escherichia coli O157:H7 str. EDL933 chromosome, complete genome. |
|---|---|
| Accession | NC_002655 |
| Length | 5,528,445 |
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The map label for this gene is speF
Identifier: 15800393
GI number:
Start: 796378
End: 798576
Strand: Reverse
Name: speF
Synonym: Z0839
Alternate gene names: NA
Gene position: NA
Preceding gene: 15800395
Following gene: 15800392
Centisome position: NA
GC content: NA
Gene sequence:
>2199_bases ATGTCAGAATTAAAAATTGCCGTTAGTCGTTCTTGCCCGGATTGTTTTTCCACTCATCGTGCATGCGTGAATATAGACGA AAGTAATTATATTGACGTTGCCGCCATTATTTTATCAGTCAGTGATGTTGAACGTGGAAAACTCGATGAAATAGACGCTA CTGGCTATGACATTCCTGTTTTTATTGCAACGGAAAATGAAGAACGTATACCAGCAGAATATCTTTCACGTATTTCTGGT GTCTTCGAACATGGAGAAGCACGCAAAGAATTTTATGGTCGTCAGTTAGAAACCGCTGCCAGCCATTATGAAACTCAACT GCGCCCACCTTTCTTTCGCGCACTGGTCGATTATGTCAATCAGGGCAACAGCGCATTTGACTGCCCCGGTCATCAGGGCG GCGAATTTTTCCGTCGCCATCCGGCGGGGAATCAGTTTGTGGAATACTTTGGTGAGGCGCTGTTCCGTGCCGACTTGTGC AACGCCGACGTAGCGATGGGCGATCTGCTGATTCACGAAGGCGCGCCATGCATTGCACAGCAACATGCAGCAAAAGTGTT TAATGCCGATAAAACCTACTTCGTTTTAAATGGCACTTCATCTTCTAACAAAGTGGTTTTAAACGCCCTGCTGACACCGG GTGATCTGGTGCTATTTGACCGCAATAACCATAAGTCTAACCACCACGGGGCCTTGCTACAGGCTGGTGCAACACCGGTT TATCTGGAAACAGCACGTAACCCGTATGGTTTTATCGGTGGTATTGATGCACACTGCTTCGAAGAAAGTTATCTGCGTGA ACTGATTACAGAAGTTGCACCGCAACGGGCAAAAGARGCGCGTCCGTTCCGCCTCGCTGTGATTCAGCTAGGCACCTACG ACGGTACGATTTATAACGCCCGCCAGGTGGTGGATAAAATTGGTCATCTGTGTGACTACATCCTGTTTGATTCCGCATGG GTCGGCTATGAACAGTTTATTCCGATGATGGCTGACTGTTCGCCGCTGTTGCTGGATCTTAATGAGAACGATCCGGGTAT TCTGGTTACGCAATCCGTACATAAACAGCAGGCTGGTTTTTCTCAAACTTCACAAATCCATAAAAAAGACAGCCACATCA AAGGGCAACAGCGTTATGTACCGCACAAACGCATGAACAACGCCTTTATGATGCATGCCTCCACCAGCCCGTTSTATCCG CTGTTTGCCGCACTGGATATCAACGCCAAAATGCATGAAGGTGTCAGCGGTCGTAATATGTGGATGGATTGTGTGGTAAA TGGCATTAATGCCCGCAAACTGATCCTCGATAACTGTCAGCATATTCGTCCGTTCATACCTGAACTGGTGGATGGTAAAC CCTGGCAGTCGTATGAAACAGCGCAAATTGCGGTTGATCTGCGCTTCTTCCAGTTTGTACCAGGTGAGCACTGGCATTCT TTTGAAGGCTATGCAGAGAATCAATACTTTGTTGATCCGTGCAAACTGTTGCTGACAACCCCAGGTATTGATGCACGTAA CGGCGAATATGAAGCGTTCGGTGTACCCGCGACGATTCTTGCTAACTTCCTGCGCGAAAATGGCGTAGTGCCGGAAAAAT GCGATCTTAACTCCATCCTCTTCCTGCTGACTCCGGCAGAAGATATGGCCAAACTTCAGCAACTTGTTGCCCTGCTGGTA CGCTTCGAAAAACTGCTGGAATCTGATGCGCCGCTGGCGGAAGTGCTACCTTCCATCTACAAACAGCATGAAGAGCGCTA CGCCGGTTATACCCTTCGTCAGTTGTGCCAGGAAATGCATGATTTGTATGCCCGCCACAACGTGAAACAACTGCAAAAAG AGATGTTCCGTAAGGAACACTTCCCACGCGTCAGCATGAATCCGCAAGAAGCTAACTACGCCTATTTACGCGGTGAAGTG GAGCTGGTTCGTCTGCCGGATGCAGAAGGCCGTATCGCTGCCGAAGGTGCGCTTCCTTATCCTCCGGGTGTGCTGTGTGT TGTTCCGGGTGAAATCTGGGGTGGTGCTGTTTTGCGTTACTTCAGCGCTCTGGAAGAAGGGATCAACCTGCTGCCAGGTT TTGCACCGGAGCTGCAGGGTGTCTATATCGAAGAACATGATGGTCGTAAGCAAGTTTGGTGCTATGTCATCAAGCCTCGT GATGCGCAAAGCACCCTGCTGAAAGGGGAAAAATTATGA
Upstream 100 bases:
>100_bases TATTTATCAGCGGTGGAGCTTTGCTTTTTTTCCGGCGTGATCGATTTCTCCTTTGAGAAATTGAGGACCTGCTATTACCT GAAATAAAGAGATGAACAAA
Downstream 100 bases:
>100_bases GTCAGGCTAAATCGAACAAAATGGGCGTCGTTCAGTTAACCATACTGACGATGGTCAACATGATGGGCTCCGGTATCATC ATGCTGCCGACAAAGCTTGC
Product: ornithine decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>732_residues MSELKIAVSRSCPDCFSTHRACVNIDESNYIDVAAIILSVSDVERGKLDEIDATGYDIPVFIATENEERIPAEYLSRISG VFEHGEARKEFYGRQLETAASHYETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRADLC NADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV YLETARNPYGFIGGIDAHCFEESYLRELITEVAPQRAKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAW VGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPXYP LFAALDINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFIPELVDGKPWQSYETAQIAVDLRFFQFVPGEHWHS FEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLV RFEKLLESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNVKQLQKEMFRKEHFPRVSMNPQEANYAYLRGEV ELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFSALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPR DAQSTLLKGEKL
Sequences:
NA
Specific function: NA
COG id: COG1982
COG function: function code E; Arginine/lysine/ornithine decarboxylases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA