| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15835305
GI number: 15835305
Start: 820257
End: 821618
Strand: Direct
Name: Not Available
Synonym: TC0690
Alternate gene names: 15835305
Gene position: 820257-821618 (Clockwise)
Preceding gene: 15835304
Following gene: 15835306
Centisome position: 76.45
GC content: 42.29
Gene sequence:
>1362_bases ATGAACACGTTTCTATCTTTTTTGACAGCTTTTGATGACTTTATTTGGTCATATGTAGCGTTTATTTTAATCCTTTCGCT CGGAGTCGTGTTCACGTACAAATCGAATTTCGCACAATTCACGCAGCTTCCTTCATTTTTTAAACTGTTCTATCGATTCT CGAAGGAGTCTTCGTCTACACAGAAAGATCTGAAGAAAGGTGTTCATCCATTAAAAGTTTTTTTCGCTTCCGCTGGAGGA AATATTGGTATAGGGAACGTTGTTGGGGTAGTCACTGCTGCTAGTGTCGGAGGCCCTGGAGCGCTCTTTTGGGTCTGGAT AGCAGGGATTCTTGGATCTATCGTTAAATACTCTGAAGTTTATCTAGGAATTAAATTCCGCCAATCCGACGCACATGGTG TGTATCACGGAGGACCCATGTTCTTCCTTGATAAGGCCTATAAAACCCGTATTGTCTCCATCATTGTGGCCATTCTTCTC TGTATCTATGGAGTGGAGATTTACCAATTTTCGGTGATTACAAACACTTTAACCTCCTGCTGGAACGTTCCTAAAATTAT TTCTATCGCCTCCCTTCTTTTCTTAGTTATTTTTGCTGTGCAAGGAGGTCTGCAACGAATAGGGAAAATCTGTTCCTTAG TTTTACCCTTCTTCATGTTGATTTACTGCGGAATGGCTTTTTACATCTTAGCTCATGAAATCCATACCCTTCCAACGCTT TTCTCAAGCATCTTCCGTTCCGCCTTTACAGGTCATGGCGCTATTGGAGGATTTGCTGGCTGCACCGTTGCATCCACTAT TCGCCAAGGGCTCTCTAGAGCTGCCTATTCGGGAGACATCGGTATTGGGTTTGATTCCATTATCCAAAGCGAGACATCGG CTACAAATCCCCAGACACAAGCTCAACTCAGCATTGTCGGAGTTGTTGTAGATAATCTTGTCTGTACATTAAGTCTTCTC ATCGTCCTCGCTTCTGGTGTTTGGCACAGAGTAGGCCTGGAGGGATCTGAGGTTGTGGAACAAGCCCTTTCCTCATATTT CCCCTATATTCGTATATTCCTTCCTGCATTCCTTTTTGCGACAGGATATACAACGATTATTTCTTACTTCCTTGTAGGGA AGAAATGCGCGAATTTTATTTGCGGTAACAAAGGATCTAAATTCTATACCTGTTATGGTATTTTAGCTTTGCCAGCTTTC TGCTTTCTACCACAAGATACGGCATTACTCGTTATGTCTGTCTCAGGGGCATTGTTGCTATGCATCAATCTATTCGGAGT TTTTTTAATGCGAAAAGAACTCGTCTTCCCCAAAAAAGCTGAGGAAACTCTTGAAGTATCTGGATCCTCTTTCTCTTCTT AG
Upstream 100 bases:
>100_bases AATAAAAATTGTTCTCTAAAAGATCCTCTACCAAACAAAAAAGAAAAAGAGGATAATATAGGGCAATTTTCAGAAGAAAA TGATTTAAATTACATATTTT
Downstream 100 bases:
>100_bases TGAGAAAGAGGTATAAAGCTGTTGCCGATCAAAGTGACGTTCCTTATATATGGTTCTTCTGACACCATAAAAAATTTTTA GAAACTTATAGGTAGTTTTT
Product: sodium/alanine symporter family protein
Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MNTFLSFLTAFDDFIWSYVAFILILSLGVVFTYKSNFAQFTQLPSFFKLFYRFSKESSSTQKDLKKGVHPLKVFFASAGG NIGIGNVVGVVTAASVGGPGALFWVWIAGILGSIVKYSEVYLGIKFRQSDAHGVYHGGPMFFLDKAYKTRIVSIIVAILL CIYGVEIYQFSVITNTLTSCWNVPKIISIASLLFLVIFAVQGGLQRIGKICSLVLPFFMLIYCGMAFYILAHEIHTLPTL FSSIFRSAFTGHGAIGGFAGCTVASTIRQGLSRAAYSGDIGIGFDSIIQSETSATNPQTQAQLSIVGVVVDNLVCTLSLL IVLASGVWHRVGLEGSEVVEQALSSYFPYIRIFLPAFLFATGYTTIISYFLVGKKCANFICGNKGSKFYTCYGILALPAF CFLPQDTALLVMSVSGALLLCINLFGVFLMRKELVFPKKAEETLEVSGSSFSS
Sequences:
>Translated_453_residues MNTFLSFLTAFDDFIWSYVAFILILSLGVVFTYKSNFAQFTQLPSFFKLFYRFSKESSSTQKDLKKGVHPLKVFFASAGG NIGIGNVVGVVTAASVGGPGALFWVWIAGILGSIVKYSEVYLGIKFRQSDAHGVYHGGPMFFLDKAYKTRIVSIIVAILL CIYGVEIYQFSVITNTLTSCWNVPKIISIASLLFLVIFAVQGGLQRIGKICSLVLPFFMLIYCGMAFYILAHEIHTLPTL FSSIFRSAFTGHGAIGGFAGCTVASTIRQGLSRAAYSGDIGIGFDSIIQSETSATNPQTQAQLSIVGVVVDNLVCTLSLL IVLASGVWHRVGLEGSEVVEQALSSYFPYIRIFLPAFLFATGYTTIISYFLVGKKCANFICGNKGSKFYTCYGILALPAF CFLPQDTALLVMSVSGALLLCINLFGVFLMRKELVFPKKAEETLEVSGSSFSS >Mature_453_residues MNTFLSFLTAFDDFIWSYVAFILILSLGVVFTYKSNFAQFTQLPSFFKLFYRFSKESSSTQKDLKKGVHPLKVFFASAGG NIGIGNVVGVVTAASVGGPGALFWVWIAGILGSIVKYSEVYLGIKFRQSDAHGVYHGGPMFFLDKAYKTRIVSIIVAILL CIYGVEIYQFSVITNTLTSCWNVPKIISIASLLFLVIFAVQGGLQRIGKICSLVLPFFMLIYCGMAFYILAHEIHTLPTL FSSIFRSAFTGHGAIGGFAGCTVASTIRQGLSRAAYSGDIGIGFDSIIQSETSATNPQTQAQLSIVGVVVDNLVCTLSLL IVLASGVWHRVGLEGSEVVEQALSSYFPYIRIFLPAFLFATGYTTIISYFLVGKKCANFICGNKGSKFYTCYGILALPAF CFLPQDTALLVMSVSGALLLCINLFGVFLMRKELVFPKKAEETLEVSGSSFSS
Specific function: Unknown
COG id: COG1115
COG function: function code E; Na+/alanine symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]
Homologues:
Organism=Escherichia coli, GI1786188, Length=357, Percent_Identity=27.4509803921569, Blast_Score=139, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001463 [H]
Pfam domain/function: PF01235 Na_Ala_symp [H]
EC number: NA
Molecular weight: Translated: 49307; Mature: 49307
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFLSFLTAFDDFIWSYVAFILILSLGVVFTYKSNFAQFTQLPSFFKLFYRFSKESSST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QKDLKKGVHPLKVFFASAGGNIGIGNVVGVVTAASVGGPGALFWVWIAGILGSIVKYSEV HHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH YLGIKFRQSDAHGVYHGGPMFFLDKAYKTRIVSIIVAILLCIYGVEIYQFSVITNTLTSC HEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WNVPKIISIASLLFLVIFAVQGGLQRIGKICSLVLPFFMLIYCGMAFYILAHEIHTLPTL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSSIFRSAFTGHGAIGGFAGCTVASTIRQGLSRAAYSGDIGIGFDSIIQSETSATNPQTQ HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHH AQLSIVGVVVDNLVCTLSLLIVLASGVWHRVGLEGSEVVEQALSSYFPYIRIFLPAFLFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TGYTTIISYFLVGKKCANFICGNKGSKFYTCYGILALPAFCFLPQDTALLVMSVSGALLL HHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH CINLFGVFLMRKELVFPKKAEETLEVSGSSFSS HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure MNTFLSFLTAFDDFIWSYVAFILILSLGVVFTYKSNFAQFTQLPSFFKLFYRFSKESSST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QKDLKKGVHPLKVFFASAGGNIGIGNVVGVVTAASVGGPGALFWVWIAGILGSIVKYSEV HHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH YLGIKFRQSDAHGVYHGGPMFFLDKAYKTRIVSIIVAILLCIYGVEIYQFSVITNTLTSC HEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WNVPKIISIASLLFLVIFAVQGGLQRIGKICSLVLPFFMLIYCGMAFYILAHEIHTLPTL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSSIFRSAFTGHGAIGGFAGCTVASTIRQGLSRAAYSGDIGIGFDSIIQSETSATNPQTQ HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHH AQLSIVGVVVDNLVCTLSLLIVLASGVWHRVGLEGSEVVEQALSSYFPYIRIFLPAFLFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TGYTTIISYFLVGKKCANFICGNKGSKFYTCYGILALPAFCFLPQDTALLVMSVSGALLL HHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH CINLFGVFLMRKELVFPKKAEETLEVSGSSFSS HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]