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The map label for this gene is rplJ

Identifier: 15835208

GI number: 15835208

Start: 709602

End: 710120

Strand: Reverse

Name: rplJ

Synonym: TC0591

Alternate gene names: 15835208

Gene position: 710120-709602 (Counterclockwise)

Preceding gene: 15835209

Following gene: 15835207

Centisome position: 66.18

GC content: 40.46

Gene sequence:

>519_bases
ATGAAAGAAGAGAAAAAGTTGCTGCTTCGCGAGGTTGAAGAAAAGATAACCGCTTCTCAAGGTTTTATTTTGTTGAGATA
CCTAGGTTTTACTGCTGCGCATTCTAGAAGCTTTAGAAACAATCTTTCCGGTGTTTCTGCTGAATTTGAAGTTTTGAAGA
AGAAAATATTCTTTAAGGCTTTAGAATCTTCTGGGGTGGAAATGGATCCAGAAGATAGTGAGGGGCATCTCGGGGTTGTG
TTTGCCTACGGCGATCCTGTGTCTGCAGCAAAGCAAGTATTAGATTTTAATAAACAACATAACGATTCTCTGGTTTTTCT
GGCTGGAAGAATAGATAATGCTTCTTTGTCTGGGAAGGAAGTTGAGGCCGTTGCTAAACTGCCTTCTATGAAAGAGCTCA
GACAACAGGTTGTTGGACTCATTGCTGCTCCTATGTCTCAAGTTGTAGGAATCATGAATTCGGTTCTTTCTGGTGTTATT
TCTTGTGTCGACCAGAAAGCAGAAAAAACTCAAGAGTAG

Upstream 100 bases:

>100_bases
ATATTTAGTTAATTTCACTATTTCCTCGACCATGGGGCCTGGTGTTACCGTGGATACTAGGGAGTTGATTGCGTTATAAT
TCTAAGTTTAAAGAGGAAAA

Downstream 100 bases:

>100_bases
TGTTAACATTCTAAAAAATAAGGGTGACAAAGTGACAACAGAAAGTTTGGAAACTTTAGTAGAACAGTTGAGCGGCTTGA
CGGTGCTTGAATTGTCTCAG

Product: 50S ribosomal protein L10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKEEKKLLLREVEEKITASQGFILLRYLGFTAAHSRSFRNNLSGVSAEFEVLKKKIFFKALESSGVEMDPEDSEGHLGVV
FAYGDPVSAAKQVLDFNKQHNDSLVFLAGRIDNASLSGKEVEAVAKLPSMKELRQQVVGLIAAPMSQVVGIMNSVLSGVI
SCVDQKAEKTQE

Sequences:

>Translated_172_residues
MKEEKKLLLREVEEKITASQGFILLRYLGFTAAHSRSFRNNLSGVSAEFEVLKKKIFFKALESSGVEMDPEDSEGHLGVV
FAYGDPVSAAKQVLDFNKQHNDSLVFLAGRIDNASLSGKEVEAVAKLPSMKELRQQVVGLIAAPMSQVVGIMNSVLSGVI
SCVDQKAEKTQE
>Mature_172_residues
MKEEKKLLLREVEEKITASQGFILLRYLGFTAAHSRSFRNNLSGVSAEFEVLKKKIFFKALESSGVEMDPEDSEGHLGVV
FAYGDPVSAAKQVLDFNKQHNDSLVFLAGRIDNASLSGKEVEAVAKLPSMKELRQQVVGLIAAPMSQVVGIMNSVLSGVI
SCVDQKAEKTQE

Specific function: Unknown

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL10_CHLMU (Q9PK78)

Other databases:

- EMBL:   AE002160
- PIR:   A81685
- RefSeq:   NP_296967.1
- ProteinModelPortal:   Q9PK78
- SMR:   Q9PK78
- GeneID:   1245950
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0591
- TIGR:   TC_0591
- HOGENOM:   HBG414036
- OMA:   KRIFFKA
- ProtClustDB:   PRK00099
- BioCyc:   CMUR243161:TC_0591-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00362
- InterPro:   IPR022973
- InterPro:   IPR001790
- InterPro:   IPR002363

Pfam domain/function: PF00466 Ribosomal_L10

EC number: NA

Molecular weight: Translated: 18817; Mature: 18817

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS01109 RIBOSOMAL_L10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEEKKLLLREVEEKITASQGFILLRYLGFTAAHSRSFRNNLSGVSAEFEVLKKKIFFKA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LESSGVEMDPEDSEGHLGVVFAYGDPVSAAKQVLDFNKQHNDSLVFLAGRIDNASLSGKE
HHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHH
VEAVAKLPSMKELRQQVVGLIAAPMSQVVGIMNSVLSGVISCVDQKAEKTQE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEEKKLLLREVEEKITASQGFILLRYLGFTAAHSRSFRNNLSGVSAEFEVLKKKIFFKA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LESSGVEMDPEDSEGHLGVVFAYGDPVSAAKQVLDFNKQHNDSLVFLAGRIDNASLSGKE
HHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHH
VEAVAKLPSMKELRQQVVGLIAAPMSQVVGIMNSVLSGVISCVDQKAEKTQE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935