| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835174
GI number: 15835174
Start: 665703
End: 667127
Strand: Reverse
Name: Not Available
Synonym: TC0557
Alternate gene names: NA
Gene position: 667127-665703 (Counterclockwise)
Preceding gene: 15835175
Following gene: 15835173
Centisome position: 62.18
GC content: 37.75
Gene sequence:
>1425_bases ATGAAGGTAAAATTGTTACAAAAAATTTTTTTGTTTTTAGCCTGTGTTGTGGCGTCTAATGGTTTCGCGCACACAATAGC TATTCCTGATAAGAACAAAGCAGCTAAAGTGCTTATTCATGATAACGGCTATGAAATGTATGAAAGCCTATTAGCTGCTA TTGACAATGCTAGATACACTGTAGAATTATGCCCTTGTATGACTGGAGGAGAAATTTTATCTACTATCCTTCAGCATTTG GATCAGCGTATGGAAGAATCTCCTGAGCTTGTAGGGTACATGCTGATTCAGCCTACACTCATTGATGAGCATGATCGGAA AAATTTGAAAGCTCTTCATGAGAAACGAAGAGATCGATTCTTTTACCTATTTTCTGACTGCCCCCCTTATTGTAATCTTT TTGCTCCTAATGTGATTGAGACGCACATTAAGCTTTCTATCGTTGATGGGAAGTATGTTTTTATTGGGGGCACGAATTTA GAAGATCTCATGTGCTCTAAAGGGGATGTTGATCTTGGAATTTCTGATTCTCCTCGTGCTATGATAGGGGGAGTGCTTCG GCCTACTGCTCTTCGAGACCAAGATGTCACGATTGTTTCAGAAGAATTAGGTGCATTGCTTCGAAAAGAGTTTTGTGCTC ATTATGCTTTATGGGAAAATTTCACTAAAAAATTCTGGTTTAACAAAAAATTAGATGATTTCAGAGGAATAGATCCTATT AATCTTTCTGTGGAAAGAGCAAGACAGTCTTTCTGTCCAGAGATAGAAACAAGTTCTTGTGCGGTTTCTGTTCCTTTAGA CAAGATTCGCTGTATTTTTTCAGGGCCGGATGAACCAAGTAATGCGATTACCCAGGAATATGTTCGGTTGATTGATCAAG CCGAACATTCAATCCGGATAGCGCAGATGTATTTTATTCCTGTAGAGAAAATATACAATAGCTTAATGACGGCCTGTTGG GGTAGAGGTGTGGATATTGGGGTAATAACCAATGGAAGAACAGATCGGAGCCCGTCAATTACTAAAACATATGCTTGGGG GAACCGAATTAACTATTTCCCACTGACTTTTGGGGATAGGCCTGCTTTATGGAAAAGATTTCTCTTTTCCCCCAGTCATG CTACTAAAAAGTTCTCAGTTCATGAGTTTTATATAACCAATACTCAATTACATAAAAAATGCATGCTTGTAGATAATCGC GTTCTAGTTATAGGTAGTTATAATTTTGGAAAGAAGAGTGATGTGTGCGATTATGAATGCATCGTTGTTATTGAGTCTGA AGAGGCTGTAGCTAAGGCTCAGGTTGTATTTGAAAAAGATTTAACTCTTTCTAAAAGAGCGACCTACGATGAGATTATTA ATTGGTATTTTGATCCTATGAATTATTGTTTAGGATATTTGGAAAATAAATACATGCCAGCCTAA
Upstream 100 bases:
>100_bases CCATTAGGGATAGAGGCTTCTGCATCTGTATTAAAAGAAGTCAGAGGAGAGGTTAAGGACTCCTTGATGCGAATTTTTAT GCAGGAAGGGATTTAGTGGG
Downstream 100 bases:
>100_bases TTTAGTCTCACAGGATCCCTAGGGAAAGGCATTTATACAGCCTTCCCGAAGGGATCCTTTTGAGTCTAGGAGGACTTGAT AAAATCTTTCGTAATAAGTA
Product: phospholipase D family protein
Products: NA
Alternate protein names: Phospholipase D; Phospholipase D Proteinase; Exported Protein
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MKVKLLQKIFLFLACVVASNGFAHTIAIPDKNKAAKVLIHDNGYEMYESLLAAIDNARYTVELCPCMTGGEILSTILQHL DQRMEESPELVGYMLIQPTLIDEHDRKNLKALHEKRRDRFFYLFSDCPPYCNLFAPNVIETHIKLSIVDGKYVFIGGTNL EDLMCSKGDVDLGISDSPRAMIGGVLRPTALRDQDVTIVSEELGALLRKEFCAHYALWENFTKKFWFNKKLDDFRGIDPI NLSVERARQSFCPEIETSSCAVSVPLDKIRCIFSGPDEPSNAITQEYVRLIDQAEHSIRIAQMYFIPVEKIYNSLMTACW GRGVDIGVITNGRTDRSPSITKTYAWGNRINYFPLTFGDRPALWKRFLFSPSHATKKFSVHEFYITNTQLHKKCMLVDNR VLVIGSYNFGKKSDVCDYECIVVIESEEAVAKAQVVFEKDLTLSKRATYDEIINWYFDPMNYCLGYLENKYMPA
Sequences:
>Translated_474_residues MKVKLLQKIFLFLACVVASNGFAHTIAIPDKNKAAKVLIHDNGYEMYESLLAAIDNARYTVELCPCMTGGEILSTILQHL DQRMEESPELVGYMLIQPTLIDEHDRKNLKALHEKRRDRFFYLFSDCPPYCNLFAPNVIETHIKLSIVDGKYVFIGGTNL EDLMCSKGDVDLGISDSPRAMIGGVLRPTALRDQDVTIVSEELGALLRKEFCAHYALWENFTKKFWFNKKLDDFRGIDPI NLSVERARQSFCPEIETSSCAVSVPLDKIRCIFSGPDEPSNAITQEYVRLIDQAEHSIRIAQMYFIPVEKIYNSLMTACW GRGVDIGVITNGRTDRSPSITKTYAWGNRINYFPLTFGDRPALWKRFLFSPSHATKKFSVHEFYITNTQLHKKCMLVDNR VLVIGSYNFGKKSDVCDYECIVVIESEEAVAKAQVVFEKDLTLSKRATYDEIINWYFDPMNYCLGYLENKYMPA >Mature_474_residues MKVKLLQKIFLFLACVVASNGFAHTIAIPDKNKAAKVLIHDNGYEMYESLLAAIDNARYTVELCPCMTGGEILSTILQHL DQRMEESPELVGYMLIQPTLIDEHDRKNLKALHEKRRDRFFYLFSDCPPYCNLFAPNVIETHIKLSIVDGKYVFIGGTNL EDLMCSKGDVDLGISDSPRAMIGGVLRPTALRDQDVTIVSEELGALLRKEFCAHYALWENFTKKFWFNKKLDDFRGIDPI NLSVERARQSFCPEIETSSCAVSVPLDKIRCIFSGPDEPSNAITQEYVRLIDQAEHSIRIAQMYFIPVEKIYNSLMTACW GRGVDIGVITNGRTDRSPSITKTYAWGNRINYFPLTFGDRPALWKRFLFSPSHATKKFSVHEFYITNTQLHKKCMLVDNR VLVIGSYNFGKKSDVCDYECIVVIESEEAVAKAQVVFEKDLTLSKRATYDEIINWYFDPMNYCLGYLENKYMPA
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54171; Mature: 54171
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKLLQKIFLFLACVVASNGFAHTIAIPDKNKAAKVLIHDNGYEMYESLLAAIDNARYT CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEE VELCPCMTGGEILSTILQHLDQRMEESPELVGYMLIQPTLIDEHDRKNLKALHEKRRDRF EEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCHHHHHHHHHHCCCEE FYLFSDCPPYCNLFAPNVIETHIKLSIVDGKYVFIGGTNLEDLMCSKGDVDLGISDSPRA EEEECCCCCCCCCCCCCEEEEEEEEEEECCEEEEEECCCHHHHHCCCCCEEECCCCCCHH MIGGVLRPTALRDQDVTIVSEELGALLRKEFCAHYALWENFTKKFWFNKKLDDFRGIDPI HHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCC NLSVERARQSFCPEIETSSCAVSVPLDKIRCIFSGPDEPSNAITQEYVRLIDQAEHSIRI CCCHHHHHHHCCCCCCCCCEEEECCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEE AQMYFIPVEKIYNSLMTACWGRGVDIGVITNGRTDRSPSITKTYAWGNRINYFPLTFGDR EEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCC PALWKRFLFSPSHATKKFSVHEFYITNTQLHKKCMLVDNRVLVIGSYNFGKKSDVCDYEC HHHHHHHHCCCCCCCCEEEEEEEEEECHHHHHEEEEECCEEEEEECCCCCCCCCCCCEEE IVVIESEEAVAKAQVVFEKDLTLSKRATYDEIINWYFDPMNYCLGYLENKYMPA EEEEECCCHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKVKLLQKIFLFLACVVASNGFAHTIAIPDKNKAAKVLIHDNGYEMYESLLAAIDNARYT CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEE VELCPCMTGGEILSTILQHLDQRMEESPELVGYMLIQPTLIDEHDRKNLKALHEKRRDRF EEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCHHHHHHHHHHCCCEE FYLFSDCPPYCNLFAPNVIETHIKLSIVDGKYVFIGGTNLEDLMCSKGDVDLGISDSPRA EEEECCCCCCCCCCCCCEEEEEEEEEEECCEEEEEECCCHHHHHCCCCCEEECCCCCCHH MIGGVLRPTALRDQDVTIVSEELGALLRKEFCAHYALWENFTKKFWFNKKLDDFRGIDPI HHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCC NLSVERARQSFCPEIETSSCAVSVPLDKIRCIFSGPDEPSNAITQEYVRLIDQAEHSIRI CCCHHHHHHHCCCCCCCCCEEEECCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEE AQMYFIPVEKIYNSLMTACWGRGVDIGVITNGRTDRSPSITKTYAWGNRINYFPLTFGDR EEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCC PALWKRFLFSPSHATKKFSVHEFYITNTQLHKKCMLVDNRVLVIGSYNFGKKSDVCDYEC HHHHHHHHCCCCCCCCEEEEEEEEEECHHHHHEEEEECCEEEEEECCCCCCCCCCCCEEE IVVIESEEAVAKAQVVFEKDLTLSKRATYDEIINWYFDPMNYCLGYLENKYMPA EEEEECCCHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA