| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835163
GI number: 15835163
Start: 655328
End: 655888
Strand: Direct
Name: Not Available
Synonym: TC0545
Alternate gene names: NA
Gene position: 655328-655888 (Clockwise)
Preceding gene: 15835159
Following gene: 15835164
Centisome position: 61.08
GC content: 40.82
Gene sequence:
>561_bases ATGGTCGAGATTTTCAACTACAGCACCTCGGTATACGAGAAGCACAGCTCTACAAATAAGCTCGTTAGTGATTTTCGTAA GGAAATCCAGATGGAAGGTGCGGCTATTCGCGATATAGCTAAGCATGCTCAAATCTTAGATATGACGCCTAAGCCTTCGG CTCTGTCGACGCTTATGCAAACCAATAAAAAAACATGCTGGGCCTCCTTTTCTCCTCCAGCAAATTTTCATAAGCAACGA TTTTCCACTCCCTACCTAGTTCCATCTCTTGGCTCTCCAGACAAACAAGACCAAGACATGGAGAAGATTTCCTCTTATTT AAAAGTTCTGACCAGAGGGAAATTTTCCTATCGCTCAGAAACGTCCCCCTTGTTAAAAAAAAATAAGCCTTCATCTGATC AAGACGATACCTCCAAACAAAGCTTTGACCAAGACGAGGAAGAGGATGCTTTGGTTCATGAAGGTAAGATATTACTCAGA GCATTAGATCAAGGGATTAAAAGCTCTAATCTTCTAATTGACTACGTCATTTCTCGTATTTTTCAATTCGTACAAGGTTA A
Upstream 100 bases:
>100_bases AACTCTTAAAAATATTGGCGTTACATCCTTATCTTAGCCACACTTGACTTTTTCCCTCCCCCGATTATGATTAAAATTAT AAGCCTTTCATAGGAGACTT
Downstream 100 bases:
>100_bases ATATATATGCTAGATAATGAGTGGAAAGCAATTTTAGGATGGGGAGACGAAGAACTTGAAGAGCTCCGCATTTCCGGGTA TTCATTTCTTCGCCAGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MVEIFNYSTSVYEKHSSTNKLVSDFRKEIQMEGAAIRDIAKHAQILDMTPKPSALSTLMQTNKKTCWASFSPPANFHKQR FSTPYLVPSLGSPDKQDQDMEKISSYLKVLTRGKFSYRSETSPLLKKNKPSSDQDDTSKQSFDQDEEEDALVHEGKILLR ALDQGIKSSNLLIDYVISRIFQFVQG
Sequences:
>Translated_186_residues MVEIFNYSTSVYEKHSSTNKLVSDFRKEIQMEGAAIRDIAKHAQILDMTPKPSALSTLMQTNKKTCWASFSPPANFHKQR FSTPYLVPSLGSPDKQDQDMEKISSYLKVLTRGKFSYRSETSPLLKKNKPSSDQDDTSKQSFDQDEEEDALVHEGKILLR ALDQGIKSSNLLIDYVISRIFQFVQG >Mature_186_residues MVEIFNYSTSVYEKHSSTNKLVSDFRKEIQMEGAAIRDIAKHAQILDMTPKPSALSTLMQTNKKTCWASFSPPANFHKQR FSTPYLVPSLGSPDKQDQDMEKISSYLKVLTRGKFSYRSETSPLLKKNKPSSDQDDTSKQSFDQDEEEDALVHEGKILLR ALDQGIKSSNLLIDYVISRIFQFVQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0422/CT_273/TC_0545 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y545_CHLMU (Q9PKC1)
Other databases:
- EMBL: AE002160 - PIR: F81689 - RefSeq: NP_296922.1 - GeneID: 1245905 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0545 - TIGR: TC_0545 - HOGENOM: HBG414022 - OMA: VYEKHAS - ProtClustDB: CLSK871297 - BioCyc: CMUR243161:TC_0545-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21146; Mature: 21146
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEIFNYSTSVYEKHSSTNKLVSDFRKEIQMEGAAIRDIAKHAQILDMTPKPSALSTLMQ CEEEECCCHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHH TNKKTCWASFSPPANFHKQRFSTPYLVPSLGSPDKQDQDMEKISSYLKVLTRGKFSYRSE CCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC TSPLLKKNKPSSDQDDTSKQSFDQDEEEDALVHEGKILLRALDQGIKSSNLLIDYVISRI CCHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH FQFVQG HHHHCC >Mature Secondary Structure MVEIFNYSTSVYEKHSSTNKLVSDFRKEIQMEGAAIRDIAKHAQILDMTPKPSALSTLMQ CEEEECCCHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHH TNKKTCWASFSPPANFHKQRFSTPYLVPSLGSPDKQDQDMEKISSYLKVLTRGKFSYRSE CCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC TSPLLKKNKPSSDQDDTSKQSFDQDEEEDALVHEGKILLRALDQGIKSSNLLIDYVISRI CCHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH FQFVQG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935