| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835112
GI number: 15835112
Start: 600633
End: 601529
Strand: Reverse
Name: Not Available
Synonym: TC0494
Alternate gene names: 15835112
Gene position: 601529-600633 (Counterclockwise)
Preceding gene: 15835113
Following gene: 15835108
Centisome position: 56.06
GC content: 39.91
Gene sequence:
>897_bases ATGACTCATACCAAACGTTTCACAAAGTTTAGTTTCCCTCTATATTTCTCTAAAACTCTTAGCTGGTTTATTATAGGTGG CTTTTTAGCTGCTTGTGGCGTTCACATGGTTCTCGCTCCTAACGACTTGATCGATGGCGGAATTGTTGGCTTATCCATGA TCGCGGCCCATTCTTTCGGAAAGCAATTTCTTCCTGTATTTTTAGTGTTGTTTAACTTGCCCTTCATCATTTTGGCTTGT AAGCGTATAGGGAAGTACTTCGTTGTGCAAATGATCACAGCAGTTATTATCTTTTCTTGCTCGGTATGGCTCATAGAAGT CTTACCTGAGTGGCTGGGAATGCAACCTTTTGTCTTTAATGGTTCAGAAATAGAGACCATTGTTCTCGGTGGAGTAATTT TAGGGGCTGGTGGAGGATTGATTATCCGCCACGGAGGAGCCACTGACGGGATAGAAATTCTAGGGATTATCATAAATAAG AAACGAGGCTATACAGTCGGACAAGTTATTTTATTTATGAACTTTTTTATTTTCTCCTTGGGAGGAATAGTCTACCGTAA TTGGCATACGGCTTTCATGTCTTTGCTGACGTATGCTGTAGCTATCAAAGTGATGGATACGGTGATTTTAGGATTTGAAG ATACCAAATCTGTAACGATTATTACCTCTTCTCCTAGAAAGTTAGGAAATATTCTCATGGAGACTTTAGGGGTTGGATTG ACATACCTGCATGCAGAAGGAGGGTTTTCAGGAGAACCTCGAAATCTTCTTTATATCGTTGTTGAGCGATTACAGCTTTC TCAGCTCAAAGAGATCGTGCACAGAGAAGATCCAAGTGCTTTTATAGCTATTGAAAACTTGCATGAAGTTATCAATGAAA AAAGAACCTCTCATTAG
Upstream 100 bases:
>100_bases TGCGCGGGAGTAGTTCAATTGGTTAGAGCACCGCCCTGTCAAGGCGGAAGTTGCGGGTTCGAGCCCCGTCTCTCGCGATC TTCAACCAAAGGTGTGAACA
Downstream 100 bases:
>100_bases TGGGGGTTCTCCCATCTTTTTATCAAGGGACTATCTAGTTGTAAAATTGCTAAGATCTTACCCACGATATCGTTAGCTAT ATCATTGGCTGTCTCAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTHTKRFTKFSFPLYFSKTLSWFIIGGFLAACGVHMVLAPNDLIDGGIVGLSMIAAHSFGKQFLPVFLVLFNLPFIILAC KRIGKYFVVQMITAVIIFSCSVWLIEVLPEWLGMQPFVFNGSEIETIVLGGVILGAGGGLIIRHGGATDGIEILGIIINK KRGYTVGQVILFMNFFIFSLGGIVYRNWHTAFMSLLTYAVAIKVMDTVILGFEDTKSVTIITSSPRKLGNILMETLGVGL TYLHAEGGFSGEPRNLLYIVVERLQLSQLKEIVHREDPSAFIAIENLHEVINEKRTSH
Sequences:
>Translated_298_residues MTHTKRFTKFSFPLYFSKTLSWFIIGGFLAACGVHMVLAPNDLIDGGIVGLSMIAAHSFGKQFLPVFLVLFNLPFIILAC KRIGKYFVVQMITAVIIFSCSVWLIEVLPEWLGMQPFVFNGSEIETIVLGGVILGAGGGLIIRHGGATDGIEILGIIINK KRGYTVGQVILFMNFFIFSLGGIVYRNWHTAFMSLLTYAVAIKVMDTVILGFEDTKSVTIITSSPRKLGNILMETLGVGL TYLHAEGGFSGEPRNLLYIVVERLQLSQLKEIVHREDPSAFIAIENLHEVINEKRTSH >Mature_297_residues THTKRFTKFSFPLYFSKTLSWFIIGGFLAACGVHMVLAPNDLIDGGIVGLSMIAAHSFGKQFLPVFLVLFNLPFIILACK RIGKYFVVQMITAVIIFSCSVWLIEVLPEWLGMQPFVFNGSEIETIVLGGVILGAGGGLIIRHGGATDGIEILGIIINKK RGYTVGQVILFMNFFIFSLGGIVYRNWHTAFMSLLTYAVAIKVMDTVILGFEDTKSVTIITSSPRKLGNILMETLGVGLT YLHAEGGFSGEPRNLLYIVVERLQLSQLKEIVHREDPSAFIAIENLHEVINEKRTSH
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0750 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 - InterPro: IPR019264 [H]
Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]
EC number: NA
Molecular weight: Translated: 32975; Mature: 32843
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTKRFTKFSFPLYFSKTLSWFIIGGFLAACGVHMVLAPNDLIDGGIVGLSMIAAHSFG CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHH KQFLPVFLVLFNLPFIILACKRIGKYFVVQMITAVIIFSCSVWLIEVLPEWLGMQPFVFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC GSEIETIVLGGVILGAGGGLIIRHGGATDGIEILGIIINKKRGYTVGQVILFMNFFIFSL CCCEEEEEECCEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH GGIVYRNWHTAFMSLLTYAVAIKVMDTVILGFEDTKSVTIITSSPRKLGNILMETLGVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCE TYLHAEGGFSGEPRNLLYIVVERLQLSQLKEIVHREDPSAFIAIENLHEVINEKRTSH EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCC >Mature Secondary Structure THTKRFTKFSFPLYFSKTLSWFIIGGFLAACGVHMVLAPNDLIDGGIVGLSMIAAHSFG CCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHH KQFLPVFLVLFNLPFIILACKRIGKYFVVQMITAVIIFSCSVWLIEVLPEWLGMQPFVFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC GSEIETIVLGGVILGAGGGLIIRHGGATDGIEILGIIINKKRGYTVGQVILFMNFFIFSL CCCEEEEEECCEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH GGIVYRNWHTAFMSLLTYAVAIKVMDTVILGFEDTKSVTIITSSPRKLGNILMETLGVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCE TYLHAEGGFSGEPRNLLYIVVERLQLSQLKEIVHREDPSAFIAIENLHEVINEKRTSH EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]