| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835093
GI number: 15835093
Start: 576277
End: 577176
Strand: Direct
Name: Not Available
Synonym: TC0475
Alternate gene names: NA
Gene position: 576277-577176 (Clockwise)
Preceding gene: 15835092
Following gene: 15835094
Centisome position: 53.71
GC content: 39.56
Gene sequence:
>900_bases GTGGCGTCTGCTCGTTTTCGGGAGGGATCCTTCCATACAAAGCCTGAAGGTTTTCGCTTATATAGAGTCATTGACATAAG ATTTTTGGCATGCTACGACCAAGAAACAATTGATTATTCACAAATCCTCAGAACTGGAGTACTTCTGACGATGGAAATCT CCCATATTTTGGAAGACCTCGTTTATGACAACGGTGTTCTTCCTAGAGAAGCTATAGAAGCTGCGATCGTCAAACATAAC CAAATCACTCCTTACCTTCTTAAAATTTTGGAAGAAGCTATTGATCATGTGTCTGATATTATTGACGATGACTGCTATCA AGGTCATCTTTATGCCATGTATCTTTTAGCTCAATTCAGAGAAACTCGAGCTCTTCCTCTTATCATTAAGTTATTCTCTT TCGAGCAAGATATCCCTCATGCAATTGCAGGAGACGTGCTTACAGAAGATCTTTCTCGTATCTTAGCCAGCGTTTGTGAC GACGTTTCTCTTATTCAAGAACTTATCGAAACTCCTCGCGTAAACCCTTATGTTCAAGCGGCAGCTATCTCTAGTTTAGT GTCCCTTGTTGGCGTAAAAAAACTTTCTAGAGGAGCTGCTATCCGTTATTTCGGAGAACTACTTAATTATCGGCTAGAAA AACGCCCTTCTTTTGCGTGGGACAGCCTCGTGGCATCTATTTGTGCTCTCTATCCTAAAGAGCTTTTTTATCCTATCAGC AAAGCCTTTTCAGCTGGTTTAATCGATAAGTCTTTCATTAGCATGGAAGACGTCGAAACAATTATTCATGAAGAATCTAT TGACTCTTGTTTACAGGAAGTCTTTTCCTCTACAGATCTCATCGATGATACTTTAGAAGAAATGGAAAAATGGTTAGAAA GATTTCCTTTTGAGTCATAG
Upstream 100 bases:
>100_bases TAGCGTTGCATGCTTTCGACTGTTATCTTTTGCATGCTAACCTAATACGGTTTAAACTTGCCTTATCTGCTTAGACGCCA AGCGTTGCAGCTGTTACTTT
Downstream 100 bases:
>100_bases CTGTTACCCCGAAAATTATAGGTAGCCATGGACAAACAAAAACGCTTCTTATCGCTTGTATTTCTGACTTTTACTCTTTT TGGAATTTGGTTCTGTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MASARFREGSFHTKPEGFRLYRVIDIRFLACYDQETIDYSQILRTGVLLTMEISHILEDLVYDNGVLPREAIEAAIVKHN QITPYLLKILEEAIDHVSDIIDDDCYQGHLYAMYLLAQFRETRALPLIIKLFSFEQDIPHAIAGDVLTEDLSRILASVCD DVSLIQELIETPRVNPYVQAAAISSLVSLVGVKKLSRGAAIRYFGELLNYRLEKRPSFAWDSLVASICALYPKELFYPIS KAFSAGLIDKSFISMEDVETIIHEESIDSCLQEVFSSTDLIDDTLEEMEKWLERFPFES
Sequences:
>Translated_299_residues MASARFREGSFHTKPEGFRLYRVIDIRFLACYDQETIDYSQILRTGVLLTMEISHILEDLVYDNGVLPREAIEAAIVKHN QITPYLLKILEEAIDHVSDIIDDDCYQGHLYAMYLLAQFRETRALPLIIKLFSFEQDIPHAIAGDVLTEDLSRILASVCD DVSLIQELIETPRVNPYVQAAAISSLVSLVGVKKLSRGAAIRYFGELLNYRLEKRPSFAWDSLVASICALYPKELFYPIS KAFSAGLIDKSFISMEDVETIIHEESIDSCLQEVFSSTDLIDDTLEEMEKWLERFPFES >Mature_298_residues ASARFREGSFHTKPEGFRLYRVIDIRFLACYDQETIDYSQILRTGVLLTMEISHILEDLVYDNGVLPREAIEAAIVKHNQ ITPYLLKILEEAIDHVSDIIDDDCYQGHLYAMYLLAQFRETRALPLIIKLFSFEQDIPHAIAGDVLTEDLSRILASVCDD VSLIQELIETPRVNPYVQAAAISSLVSLVGVKKLSRGAAIRYFGELLNYRLEKRPSFAWDSLVASICALYPKELFYPISK AFSAGLIDKSFISMEDVETIIHEESIDSCLQEVFSSTDLIDDTLEEMEKWLERFPFES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0206/CT_203/TC_0475 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010602 [H]
Pfam domain/function: PF06685 DUF1186 [H]
EC number: NA
Molecular weight: Translated: 34104; Mature: 33973
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASARFREGSFHTKPEGFRLYRVIDIRFLACYDQETIDYSQILRTGVLLTMEISHILEDL CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VYDNGVLPREAIEAAIVKHNQITPYLLKILEEAIDHVSDIIDDDCYQGHLYAMYLLAQFR HHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHH ETRALPLIIKLFSFEQDIPHAIAGDVLTEDLSRILASVCDDVSLIQELIETPRVNPYVQA HHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHH AAISSLVSLVGVKKLSRGAAIRYFGELLNYRLEKRPSFAWDSLVASICALYPKELFYPIS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH KAFSAGLIDKSFISMEDVETIIHEESIDSCLQEVFSSTDLIDDTLEEMEKWLERFPFES HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ASARFREGSFHTKPEGFRLYRVIDIRFLACYDQETIDYSQILRTGVLLTMEISHILEDL CCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VYDNGVLPREAIEAAIVKHNQITPYLLKILEEAIDHVSDIIDDDCYQGHLYAMYLLAQFR HHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHH ETRALPLIIKLFSFEQDIPHAIAGDVLTEDLSRILASVCDDVSLIQELIETPRVNPYVQA HHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHH AAISSLVSLVGVKKLSRGAAIRYFGELLNYRLEKRPSFAWDSLVASICALYPKELFYPIS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH KAFSAGLIDKSFISMEDVETIIHEESIDSCLQEVFSSTDLIDDTLEEMEKWLERFPFES HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]