| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835040
GI number: 15835040
Start: 482348
End: 484192
Strand: Direct
Name: Not Available
Synonym: TC0422
Alternate gene names: 15835040
Gene position: 482348-484192 (Clockwise)
Preceding gene: 15835039
Following gene: 15835041
Centisome position: 44.96
GC content: 42.28
Gene sequence:
>1845_bases ATGGAAGAGCAATCCACAGTTGAATATTGGGGAGATTACAAAGTTATCGCGGAACTCGAGCAAGGATTGTGGAGTCGAGA TGTTCTTACAGAACATCGGTTTATTAAAAAACGTTACGTGCTCAAGATACTTCCTTCGGAACTTTCATTGTCAGAAGATT TTATGAAAGTGTTTCAAAAGGTCATTGTTCAATTAGCTACGATTCGCCATCCAAGCTTGGTAGCTATTGAGAATGTTTCT CAGGAGAAGGATCGCTATTTTATTGTGACGGAAGAGAATAGCGGTACGATCTCTCTGGCCAAGTATTTATCTGGAAGAAA ACTATCAGAAGAAGAGATTGTGTATTTGATTCAACAACTTTGTGAAGTTTTGGAGCTAGTACATGAAATAGGATTAGCTC ATGGTCAGATTAATTTACATTCTGTTCATGTCTCTTTTATCAATGGAGTAGCCAATATTTATCTTCCTGAGGTGGGGTTC GCATCTTTGCTTAGAGAACGTATGTTCTCCTCTATTATGCAGAAAGCTTCCATGCAAGAAAGCGTGGAATGTATTCGTGA TTTGTTGGTGTTTGAGGCTCCTGAAGAGAAATCAACCAATCACCGTGCGACAGATGCGTACTCAGTTGGTGTGTTAGCTT ATTACTTGCTAGTAGGAGCATTTCCTTGGGGAGCTTTTCCTAAACCCTCGTCTTGTATACCTGACAGTATTTATGATTGG GATAGTTTTATTTTGAGTTGTTTGCAGCAACAACAACAAGCCAGACCGAAGCGATTGCGAGATGCTCTAAAGAAAAAAAC ATTAGGAGAGCAGCTCCAGTCGACTATTGACCACTGTCGTGAGTCCTTGCGTGCGATGGAAGTTCAAGAGGAGGTTTCGG AACCTATTGCTCCGACGTCTCTGATTCGAGAGGGAGAGAAGCTTTTTGAGGGCAAAGAGGAACAACAAGCTTTTGTATTA GTAGAGGCTAAATCGATTGATGAAGCAATGGTTACTACTGTGGATTCAGAGGAAGTATCGGAGAGTGGAGAAGGATATGT CAATCCGTTGCAGTCTTTATTAGCAAGAGAACCGGTCGTTAGTCGCTACGTAGAAATAGAAAGAGAAGAAGTGAAACCTC AACCGCTATCTACCGAAATGGTGTTTATTGAGGGAGGAGATTTTTCTCGTGGAAGCAGAGATGGACAGAGGGATGAATTA CCGGTTCATAATATCACCCTTCCGGGATTTCTTTTAGATATTCATCCTGTTACGAATGAGCATTTTGTACGTTTTTTGGA GTTTATTGGCGGAGAACAGGACGAACATTATAATGAACTAATTCGTTTAAAAGATTCTAGGATTCAGCGTCGCTCAGGCA GGCTTATTATTGAGCCTGGATATGCTAAACATCCTGTTGTGGGTGTGACTTGGTATGGTGCTTCTTCTTATGCAAGTTGG ATAGGCAAGAGGTTGCCTTCGGAGGCTGAATGGGAAGTGGCGGCTGCCGGAGGGAAGTTAGGAATGCGTTACCCTACCGG AGAAGATGTAGATAAAAGCAAAGCTAACTTCTTTAGTTCAGATACAACGCCGGTTATGAGCTATCCAGCTAATATACTAG GTCTTTATGATATGGCAGGGAATATATACGAATGGTGCCAGGATTGGTACAGTTACGATTTTTATGAAAATTCCGCTTTA GAGCCAGATTCTCCTCAGGGGCCTCCTCAAGGTGTCTATCGCGTTTTGCGAGGAGGGTGTTGGAAGAGTCTAAAAGAGGA TCTCCGTTGTGCACATCGCCACCGAAACAATCCAGGGGCAATTAATAGCACCTATGGGTTTCGTTGTGCGAAAGATGTAA AATAA
Upstream 100 bases:
>100_bases GTTGTAGACTGATCGAAAAGCTACAAGTATAGTACTAGGAAGAGAAGGCACTTAGTAGGCTCAGTCAAAGAACTTCGAAA CAGGTATAAGGGTCCCAAAA
Downstream 100 bases:
>100_bases AGGGCTTGCTATGAGAGCTTTGTCTCAAGACTATTATATTGCTTTATGTACAGAGTTGATAGAGCATGATCGGCGTTATT ATGTGTTGGATCGACCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MEEQSTVEYWGDYKVIAELEQGLWSRDVLTEHRFIKKRYVLKILPSELSLSEDFMKVFQKVIVQLATIRHPSLVAIENVS QEKDRYFIVTEENSGTISLAKYLSGRKLSEEEIVYLIQQLCEVLELVHEIGLAHGQINLHSVHVSFINGVANIYLPEVGF ASLLRERMFSSIMQKASMQESVECIRDLLVFEAPEEKSTNHRATDAYSVGVLAYYLLVGAFPWGAFPKPSSCIPDSIYDW DSFILSCLQQQQQARPKRLRDALKKKTLGEQLQSTIDHCRESLRAMEVQEEVSEPIAPTSLIREGEKLFEGKEEQQAFVL VEAKSIDEAMVTTVDSEEVSESGEGYVNPLQSLLAREPVVSRYVEIEREEVKPQPLSTEMVFIEGGDFSRGSRDGQRDEL PVHNITLPGFLLDIHPVTNEHFVRFLEFIGGEQDEHYNELIRLKDSRIQRRSGRLIIEPGYAKHPVVGVTWYGASSYASW IGKRLPSEAEWEVAAAGGKLGMRYPTGEDVDKSKANFFSSDTTPVMSYPANILGLYDMAGNIYEWCQDWYSYDFYENSAL EPDSPQGPPQGVYRVLRGGCWKSLKEDLRCAHRHRNNPGAINSTYGFRCAKDVK
Sequences:
>Translated_614_residues MEEQSTVEYWGDYKVIAELEQGLWSRDVLTEHRFIKKRYVLKILPSELSLSEDFMKVFQKVIVQLATIRHPSLVAIENVS QEKDRYFIVTEENSGTISLAKYLSGRKLSEEEIVYLIQQLCEVLELVHEIGLAHGQINLHSVHVSFINGVANIYLPEVGF ASLLRERMFSSIMQKASMQESVECIRDLLVFEAPEEKSTNHRATDAYSVGVLAYYLLVGAFPWGAFPKPSSCIPDSIYDW DSFILSCLQQQQQARPKRLRDALKKKTLGEQLQSTIDHCRESLRAMEVQEEVSEPIAPTSLIREGEKLFEGKEEQQAFVL VEAKSIDEAMVTTVDSEEVSESGEGYVNPLQSLLAREPVVSRYVEIEREEVKPQPLSTEMVFIEGGDFSRGSRDGQRDEL PVHNITLPGFLLDIHPVTNEHFVRFLEFIGGEQDEHYNELIRLKDSRIQRRSGRLIIEPGYAKHPVVGVTWYGASSYASW IGKRLPSEAEWEVAAAGGKLGMRYPTGEDVDKSKANFFSSDTTPVMSYPANILGLYDMAGNIYEWCQDWYSYDFYENSAL EPDSPQGPPQGVYRVLRGGCWKSLKEDLRCAHRHRNNPGAINSTYGFRCAKDVK >Mature_614_residues MEEQSTVEYWGDYKVIAELEQGLWSRDVLTEHRFIKKRYVLKILPSELSLSEDFMKVFQKVIVQLATIRHPSLVAIENVS QEKDRYFIVTEENSGTISLAKYLSGRKLSEEEIVYLIQQLCEVLELVHEIGLAHGQINLHSVHVSFINGVANIYLPEVGF ASLLRERMFSSIMQKASMQESVECIRDLLVFEAPEEKSTNHRATDAYSVGVLAYYLLVGAFPWGAFPKPSSCIPDSIYDW DSFILSCLQQQQQARPKRLRDALKKKTLGEQLQSTIDHCRESLRAMEVQEEVSEPIAPTSLIREGEKLFEGKEEQQAFVL VEAKSIDEAMVTTVDSEEVSESGEGYVNPLQSLLAREPVVSRYVEIEREEVKPQPLSTEMVFIEGGDFSRGSRDGQRDEL PVHNITLPGFLLDIHPVTNEHFVRFLEFIGGEQDEHYNELIRLKDSRIQRRSGRLIIEPGYAKHPVVGVTWYGASSYASW IGKRLPSEAEWEVAAAGGKLGMRYPTGEDVDKSKANFFSSDTTPVMSYPANILGLYDMAGNIYEWCQDWYSYDFYENSAL EPDSPQGPPQGVYRVLRGGCWKSLKEDLRCAHRHRNNPGAINSTYGFRCAKDVK
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain
Homologues:
Organism=Homo sapiens, GI257470975, Length=283, Percent_Identity=32.1554770318021, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI38202250, Length=303, Percent_Identity=30.6930693069307, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI194248087, Length=277, Percent_Identity=32.8519855595668, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI194248088, Length=287, Percent_Identity=32.404181184669, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI257470977, Length=300, Percent_Identity=28, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI226437577, Length=170, Percent_Identity=35.2941176470588, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI20130397, Length=289, Percent_Identity=29.4117647058824, Blast_Score=96, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PKN1_CHLMU (Q9PKP3)
Other databases:
- EMBL: AE002160 - PIR: H81703 - RefSeq: NP_296799.1 - ProteinModelPortal: Q9PKP3 - SMR: Q9PKP3 - GeneID: 1245775 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0422 - TIGR: TC_0422 - HOGENOM: HBG413964 - OMA: YYNELIR - ProtClustDB: CLSK871217 - BioCyc: CMUR243161:TC_0422-MONOMER - BRENDA: 2.7.11.1 - InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 - Gene3D: G3DSA:3.90.1580.10
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase; SSF56436 C-type_lectin_fold; SSF56112 Kinase_like
EC number: =2.7.11.1
Molecular weight: Translated: 69783; Mature: 69783
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: BINDING 42-42
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEQSTVEYWGDYKVIAELEQGLWSRDVLTEHRFIKKRYVLKILPSELSLSEDFMKVFQK CCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHH VIVQLATIRHPSLVAIENVSQEKDRYFIVTEENSGTISLAKYLSGRKLSEEEIVYLIQQL HHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHH CEVLELVHEIGLAHGQINLHSVHVSFINGVANIYLPEVGFASLLRERMFSSIMQKASMQE HHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SVECIRDLLVFEAPEEKSTNHRATDAYSVGVLAYYLLVGAFPWGAFPKPSSCIPDSIYDW HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH DSFILSCLQQQQQARPKRLRDALKKKTLGEQLQSTIDHCRESLRAMEVQEEVSEPIAPTS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LIREGEKLFEGKEEQQAFVLVEAKSIDEAMVTTVDSEEVSESGEGYVNPLQSLLAREPVV HHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCHHH SRYVEIEREEVKPQPLSTEMVFIEGGDFSRGSRDGQRDELPVHNITLPGFLLDIHPVTNE HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCHH HFVRFLEFIGGEQDEHYNELIRLKDSRIQRRSGRLIIEPGYAKHPVVGVTWYGASSYASW HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCHHHHHH IGKRLPSEAEWEVAAAGGKLGMRYPTGEDVDKSKANFFSSDTTPVMSYPANILGLYDMAG HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCHHHHHHHHHHC NIYEWCQDWYSYDFYENSALEPDSPQGPPQGVYRVLRGGCWKSLKEDLRCAHRHRNNPGA HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC INSTYGFRCAKDVK CCCCCCCCCCCCCC >Mature Secondary Structure MEEQSTVEYWGDYKVIAELEQGLWSRDVLTEHRFIKKRYVLKILPSELSLSEDFMKVFQK CCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHH VIVQLATIRHPSLVAIENVSQEKDRYFIVTEENSGTISLAKYLSGRKLSEEEIVYLIQQL HHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHH CEVLELVHEIGLAHGQINLHSVHVSFINGVANIYLPEVGFASLLRERMFSSIMQKASMQE HHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SVECIRDLLVFEAPEEKSTNHRATDAYSVGVLAYYLLVGAFPWGAFPKPSSCIPDSIYDW HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH DSFILSCLQQQQQARPKRLRDALKKKTLGEQLQSTIDHCRESLRAMEVQEEVSEPIAPTS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LIREGEKLFEGKEEQQAFVLVEAKSIDEAMVTTVDSEEVSESGEGYVNPLQSLLAREPVV HHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCHHH SRYVEIEREEVKPQPLSTEMVFIEGGDFSRGSRDGQRDELPVHNITLPGFLLDIHPVTNE HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCHH HFVRFLEFIGGEQDEHYNELIRLKDSRIQRRSGRLIIEPGYAKHPVVGVTWYGASSYASW HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCHHHHHH IGKRLPSEAEWEVAAAGGKLGMRYPTGEDVDKSKANFFSSDTTPVMSYPANILGLYDMAG HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCHHHHHHHHHHC NIYEWCQDWYSYDFYENSALEPDSPQGPPQGVYRVLRGGCWKSLKEDLRCAHRHRNNPGA HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC INSTYGFRCAKDVK CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10684935