Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15835024

GI number: 15835024

Start: 465006

End: 465650

Strand: Direct

Name: Not Available

Synonym: TC0405

Alternate gene names: 15835024

Gene position: 465006-465650 (Clockwise)

Preceding gene: 15835021

Following gene: 15835025

Centisome position: 43.34

GC content: 38.29

Gene sequence:

>645_bases
GTGGAGCACTATTTACTGACAGCAAAATTACTTCTTCGCGGATGCGGATATACTCTATTTATTACAGCGATTTCTTTGGT
GTGTGGGTTCGTCCTTGGTTGGGGTATAGGAACAGTTAATTCACGTTATTTCCCTTGTCGAATTGCAAAATTTTTAGGGA
ATTTTTATGTGATGGCTGTACGAGGTACACCTCTATTTATTCAAATCTTAATTGTCTATTTTGGTTTGCCCTCTTTGATA
AAAGTAAATTTGTCTCCGCTTGTTGCTGGACTGATTGCTTTGACTTTCAATTCCGCTGCTTATCTATCAGAAAATGTTCG
CGGAGGGATCAATGCCATTCCTATTCAACAATGGGAGGCTGCAAAGGTATTAGGGTATAAAGCATCCCAAATATTTTGGC
ATATTCTGTATCCGCAGGTGTTTAAGAATATCCTTCCTTCTTTAACGAATGAATTTGTTTCCTTGATTAAGGAAAGCAGC
ATTCTTATGGTAGTTGGAGTTCCTGAATTAACGAAGGTAACAAAAGATATTGTGGCTCGAGAGCTAAATCCTATGGAGAT
GTATCTAATCTGTGCAGGGTTATATCTAGTTATGACTTCCGCTTTTTCTTATTTTGCTAGGTTATCAGAGAAGGAGTCGG
CATGA

Upstream 100 bases:

>100_bases
CTATAAAAGATTTTTAATTAGGAAAGGCTTTTTTTATAAAAAGCTTTAGGTCAAAATAGTTGTCATAGATTTTTGCAACA
CTAATGATGGGTAGGGAGTA

Downstream 100 bases:

>100_bases
CTGTTGAAGTTAAAAATTTGGCCGTATCTGTAAATGGCAAAGAGATTCTTTCAAAAGCATCTTTTTCTCTAATTCCAGGG
CGAATTACCTTGTTTATTGG

Product: amino acid ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MEHYLLTAKLLLRGCGYTLFITAISLVCGFVLGWGIGTVNSRYFPCRIAKFLGNFYVMAVRGTPLFIQILIVYFGLPSLI
KVNLSPLVAGLIALTFNSAAYLSENVRGGINAIPIQQWEAAKVLGYKASQIFWHILYPQVFKNILPSLTNEFVSLIKESS
ILMVVGVPELTKVTKDIVARELNPMEMYLICAGLYLVMTSAFSYFARLSEKESA

Sequences:

>Translated_214_residues
MEHYLLTAKLLLRGCGYTLFITAISLVCGFVLGWGIGTVNSRYFPCRIAKFLGNFYVMAVRGTPLFIQILIVYFGLPSLI
KVNLSPLVAGLIALTFNSAAYLSENVRGGINAIPIQQWEAAKVLGYKASQIFWHILYPQVFKNILPSLTNEFVSLIKESS
ILMVVGVPELTKVTKDIVARELNPMEMYLICAGLYLVMTSAFSYFARLSEKESA
>Mature_214_residues
MEHYLLTAKLLLRGCGYTLFITAISLVCGFVLGWGIGTVNSRYFPCRIAKFLGNFYVMAVRGTPLFIQILIVYFGLPSLI
KVNLSPLVAGLIALTFNSAAYLSENVRGGINAIPIQQWEAAKVLGYKASQIFWHILYPQVFKNILPSLTNEFVSLIKESS
ILMVVGVPELTKVTKDIVARELNPMEMYLICAGLYLVMTSAFSYFARLSEKESA

Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=193, Percent_Identity=35.2331606217617, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1787030, Length=204, Percent_Identity=30.3921568627451, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1787087, Length=212, Percent_Identity=28.7735849056604, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1788645, Length=210, Percent_Identity=29.5238095238095, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788646, Length=203, Percent_Identity=25.615763546798, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=28.3018867924528, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=27.4881516587678, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI87082239, Length=204, Percent_Identity=27.9411764705882, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786874, Length=209, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI48994930, Length=214, Percent_Identity=26.6355140186916, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23793; Mature: 23793

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHYLLTAKLLLRGCGYTLFITAISLVCGFVLGWGIGTVNSRYFPCRIAKFLGNFYVMAV
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEEE
RGTPLFIQILIVYFGLPSLIKVNLSPLVAGLIALTFNSAAYLSENVRGGINAIPIQQWEA
CCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHH
AKVLGYKASQIFWHILYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVAR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
ELNPMEMYLICAGLYLVMTSAFSYFARLSEKESA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEHYLLTAKLLLRGCGYTLFITAISLVCGFVLGWGIGTVNSRYFPCRIAKFLGNFYVMAV
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEEE
RGTPLFIQILIVYFGLPSLIKVNLSPLVAGLIALTFNSAAYLSENVRGGINAIPIQQWEA
CCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHH
AKVLGYKASQIFWHILYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVAR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
ELNPMEMYLICAGLYLVMTSAFSYFARLSEKESA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]