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The map label for this gene is ompA

Identifier: 15834677

GI number: 15834677

Start: 58653

End: 59816

Strand: Reverse

Name: ompA

Synonym: TC0052

Alternate gene names: 15834677

Gene position: 59816-58653 (Counterclockwise)

Preceding gene: 15834686

Following gene: 15834676

Centisome position: 5.57

GC content: 43.98

Gene sequence:

>1164_bases
ATGAAAAAACTCTTGAAATCGGTATTAGCATTTGCCGTTTTGGGTTCTGCTTCCTCCTTGCATGCTCTGCCTGTGGGGAA
TCCTGCTGAACCAAGCCTTATGATTGACGGGATTCTTTGGGAAGGTTTCGGTGGAGATCCTTGCGATCCTTGCACAACTT
GGTGTGATGCCATCAGCCTACGTCTCGGCTACTATGGGGACTTCGTTTTTGATCGTGTTTTGAAAACAGACGTGAACAAA
CAGTTCGAAATGGGAGCAGCTCCTACAGGAGATGCAGACCTTACTACAGCACCTACTCCTGCATCAAGAGAGAATCCCGC
TTATGGCAAGCATATGCAAGATGCAGAAATGTTCACTAATGCTGCGTACATGGCTTTAAACATTTGGGACCGTTTCGATG
TATTTTGTACATTGGGAGCAACTAGCGGATATCTTAAAGGTAATTCTGCCGCCTTTAACTTAGTTGGTCTGTTTGGAAGA
GATGAAACTGCAGTTGCAGCTGACGACATACCTAACGTCAGCTTGTCTCAAGCTGTTGTCGAACTCTACACAGACACAGC
TTTCGCTTGGAGCGTCGGTGCTAGAGCAGCTTTATGGGAGTGCGGATGTGCAACTTTAGGAGCTTCCTTCCAATATGCTC
AATCTAAGCCAAAAGTAGAGGAATTAAACGTTCTCTGTAATGCGGCAGAATTCACTATTAACAAGCCTAAAGGATACGTT
GGACAAGAGTTTCCTCTTAACATTAAAGCTGGAACAGTTAGCGCTACAGATACTAAAGATGCTTCCATCGATTACCATGA
GTGGCAAGCAAGCTTGGCTTTGTCTTACAGACTGAATATGTTCACTCCTTACATTGGAGTTAAGTGGTCTAGAGCAAGCT
TTGATGCCGACACTATCCGCATTGCGCAGCCTKAGCTTGAGACCTCTATCTTAAKAATGACCACTTGGAACCCAACGATC
TCTGGATCTGGTATAGACGTTGATACAAAAATCACGGATACATTACAAATTGTTTCCTTGCAGCTCAACAAGATGAAATC
CAGAAAATCTTGCGGTCTTGCAATTGGAACAACAATTGTAGATGCTGATAAATATGCAGTTACTGTTGAGACACGCTTGA
TCGATGAAAGAGCAGCTCACGTAAATGCTCAGTTCCGTTTCTAA

Upstream 100 bases:

>100_bases
CTACAGGACATCTTGTCTGGCTTTAACTAGGACACAGTGCCGCCAGAAAAAGATAGCGGGCACAAAGAGAGCTAATTATA
CAATCTTATTAGAGGTAAGA

Downstream 100 bases:

>100_bases
TAGCGGCATATAATTTATTAGAACTAGCTTATTTTTCATCAATAAACACTCCTGTGTTTCTGGACTCGGTTTCGATCGAG
TCCAGTTTTTCTTTCAAAAA

Product: major outer membrane protein, porin

Products: NA

Alternate protein names: MOMP [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MKKLLKSVLAFAVLGSASSLHALPVGNPAEPSLMIDGILWEGFGGDPCDPCTTWCDAISLRLGYYGDFVFDRVLKTDVNK
QFEMGAAPTGDADLTTAPTPASRENPAYGKHMQDAEMFTNAAYMALNIWDRFDVFCTLGATSGYLKGNSAAFNLVGLFGR
DETAVAADDIPNVSLSQAVVELYTDTAFAWSVGARAALWECGCATLGASFQYAQSKPKVEELNVLCNAAEFTINKPKGYV
GQEFPLNIKAGTVSATDTKDASIDYHEWQASLALSYRLNMFTPYIGVKWSRASFDADTIRIAQPXLETSILXMTTWNPTI
SGSGIDVDTKITDTLQIVSLQLNKMKSRKSCGLAIGTTIVDADKYAVTVETRLIDERAAHVNAQFRF

Sequences:

>Translated_387_residues
MKKLLKSVLAFAVLGSASSLHALPVGNPAEPSLMIDGILWEGFGGDPCDPCTTWCDAISLRLGYYGDFVFDRVLKTDVNK
QFEMGAAPTGDADLTTAPTPASRENPAYGKHMQDAEMFTNAAYMALNIWDRFDVFCTLGATSGYLKGNSAAFNLVGLFGR
DETAVAADDIPNVSLSQAVVELYTDTAFAWSVGARAALWECGCATLGASFQYAQSKPKVEELNVLCNAAEFTINKPKGYV
GQEFPLNIKAGTVSATDTKDASIDYHEWQASLALSYRLNMFTPYIGVKWSRASFDADTIRIAQPXLETSILXMTTWNPTI
SGSGIDVDTKITDTLQIVSLQLNKMKSRKSCGLAIGTTIVDADKYAVTVETRLIDERAAHVNAQFRF
>Mature_387_residues
MKKLLKSVLAFAVLGSASSLHALPVGNPAEPSLMIDGILWEGFGGDPCDPCTTWCDAISLRLGYYGDFVFDRVLKTDVNK
QFEMGAAPTGDADLTTAPTPASRENPAYGKHMQDAEMFTNAAYMALNIWDRFDVFCTLGATSGYLKGNSAAFNLVGLFGR
DETAVAADDIPNVSLSQAVVELYTDTAFAWSVGARAALWECGCATLGASFQYAQSKPKVEELNVLCNAAEFTINKPKGYV
GQEFPLNIKAGTVSATDTKDASIDYHEWQASLALSYRLNMFTPYIGVKWSRASFDADTIRIAQPXLETSILXMTTWNPTI
SGSGIDVDTKITDTLQIVSLQLNKMKSRKSCGLAIGTTIVDADKYAVTVETRLIDERAAHVNAQFRF

Specific function: Permits diffusion of specific solutes through the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial porin (CP) (TC 1.B.2) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000604 [H]

Pfam domain/function: PF01308 Chlam_OMP [H]

EC number: NA

Molecular weight: Translated: 41868; Mature: 41868

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLKSVLAFAVLGSASSLHALPVGNPAEPSLMIDGILWEGFGGDPCDPCTTWCDAISL
CHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHH
RLGYYGDFVFDRVLKTDVNKQFEMGAAPTGDADLTTAPTPASRENPAYGKHMQDAEMFTN
HHCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
AAYMALNIWDRFDVFCTLGATSGYLKGNSAAFNLVGLFGRDETAVAADDIPNVSLSQAVV
CEEEEEEECCCEEEEEEECCCCCEECCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHH
ELYTDTAFAWSVGARAALWECGCATLGASFQYAQSKPKVEELNVLCNAAEFTINKPKGYV
HHHHCCCEEECCCCCHHHHHCCHHHHCCCCHHHCCCCCHHHHHHHCCCEEEEEECCCCCC
GQEFPLNIKAGTVSATDTKDASIDYHEWQASLALSYRLNMFTPYIGVKWSRASFDADTIR
CCCCCEEEECCEEECCCCCCCCCCHHHHHEEEEEEEEEEEECCCCEEEECCCCCCCCEEE
IAQPXLETSILXMTTWNPTISGSGIDVDTKITDTLQIVSLQLNKMKSRKSCGLAIGTTIV
EECCCCCEEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCEEE
DADKYAVTVETRLIDERAAHVNAQFRF
ECCCEEEEEEEHHHHHHHHHCEEEECC
>Mature Secondary Structure
MKKLLKSVLAFAVLGSASSLHALPVGNPAEPSLMIDGILWEGFGGDPCDPCTTWCDAISL
CHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHH
RLGYYGDFVFDRVLKTDVNKQFEMGAAPTGDADLTTAPTPASRENPAYGKHMQDAEMFTN
HHCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
AAYMALNIWDRFDVFCTLGATSGYLKGNSAAFNLVGLFGRDETAVAADDIPNVSLSQAVV
CEEEEEEECCCEEEEEEECCCCCEECCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHH
ELYTDTAFAWSVGARAALWECGCATLGASFQYAQSKPKVEELNVLCNAAEFTINKPKGYV
HHHHCCCEEECCCCCHHHHHCCHHHHCCCCHHHCCCCCHHHHHHHCCCEEEEEECCCCCC
GQEFPLNIKAGTVSATDTKDASIDYHEWQASLALSYRLNMFTPYIGVKWSRASFDADTIR
CCCCCEEEECCEEECCCCCCCCCCHHHHHEEEEEEEEEEEECCCCEEEECCCCCCCCEEE
IAQPXLETSILXMTTWNPTISGSGIDVDTKITDTLQIVSLQLNKMKSRKSCGLAIGTTIV
EECCCCCEEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCEEE
DADKYAVTVETRLIDERAAHVNAQFRF
ECCCEEEEEEEHHHHHHHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8277858 [H]