| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834663
GI number: 15834663
Start: 43699
End: 44148
Strand: Direct
Name: Not Available
Synonym: TC0038
Alternate gene names: NA
Gene position: 43699-44148 (Clockwise)
Preceding gene: 15834662
Following gene: 15834664
Centisome position: 4.07
GC content: 37.56
Gene sequence:
>450_bases ATGGCGAATTTAGATGCATTTAGGGAAGATTTTGCGCTGTTTTTTGAAGCAGGACTGGTTGCTATCAAACAAGGAGATGA GGTTAGTGCTCAAGCTTTGTTTCAAGTATTACACGTGTTAGATCCTGAACATACAGCCTACGAAGTAGGAAATGGATTAA TTCATTTACATAAGATGGAGTTAACGCAGGCAGAAAGTTTATTTCGTGTTGTAGTTGAAAAAGATCCCGAGAACTGGAGT GCAAAGGCATTTTTATCATTAACATTAATGATGATTGTGCTTCATCAAGGAAGTTCTTTTGAAGTGCGCAGAGAAAGTTT AGAGCAATGCTTGCGTTTAGCTGATCAGGTATTAGAAAATTGTAAAATAGAGTCCACAAAAGCTTTAGCAAGGTCTGTTT TGGATTGGCATGACGAGTTAGTTGCTAAGAGTTGTGGTCCTTTGAATTAA
Upstream 100 bases:
>100_bases GAGGCTTCATCCAACATCTTGACAGCAGTGCATACAGAGATGATCACTATGGCAAGATCTGCTAAAGGAAGTTAATTAAA AAAATAGGAAGGGTATGGTC
Downstream 100 bases:
>100_bases ATTAAGGGAAAATTGGAGTGGTGCATGATAGATCCTCTGACACTTTTTCCAAATTTTGATGGAGATAAGGAGAGTGCTGT GGTTGACAAGCCTTCAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MANLDAFREDFALFFEAGLVAIKQGDEVSAQALFQVLHVLDPEHTAYEVGNGLIHLHKMELTQAESLFRVVVEKDPENWS AKAFLSLTLMMIVLHQGSSFEVRRESLEQCLRLADQVLENCKIESTKALARSVLDWHDELVAKSCGPLN
Sequences:
>Translated_149_residues MANLDAFREDFALFFEAGLVAIKQGDEVSAQALFQVLHVLDPEHTAYEVGNGLIHLHKMELTQAESLFRVVVEKDPENWS AKAFLSLTLMMIVLHQGSSFEVRRESLEQCLRLADQVLENCKIESTKALARSVLDWHDELVAKSCGPLN >Mature_148_residues ANLDAFREDFALFFEAGLVAIKQGDEVSAQALFQVLHVLDPEHTAYEVGNGLIHLHKMELTQAESLFRVVVEKDPENWSA KAFLSLTLMMIVLHQGSSFEVRRESLEQCLRLADQVLENCKIESTKALARSVLDWHDELVAKSCGPLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16753; Mature: 16622
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLDAFREDFALFFEAGLVAIKQGDEVSAQALFQVLHVLDPEHTAYEVGNGLIHLHKME CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEEEEHHHH LTQAESLFRVVVEKDPENWSAKAFLSLTLMMIVLHQGSSFEVRRESLEQCLRLADQVLEN HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH CKIESTKALARSVLDWHDELVAKSCGPLN CCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ANLDAFREDFALFFEAGLVAIKQGDEVSAQALFQVLHVLDPEHTAYEVGNGLIHLHKME CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEEEEHHHH LTQAESLFRVVVEKDPENWSAKAFLSLTLMMIVLHQGSSFEVRRESLEQCLRLADQVLEN HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH CKIESTKALARSVLDWHDELVAKSCGPLN CCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA