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The map label for this gene is trkA3

Identifier: 16120155

GI number: 16120155

Start: 179492

End: 180145

Strand: Reverse

Name: trkA3

Synonym: VNG6218G

Alternate gene names: 16120155

Gene position: 180145-179492 (Counterclockwise)

Preceding gene: 16120156

Following gene: 16120143

Centisome position: 49.3

GC content: 69.88

Gene sequence:

>654_bases
ATGACCACTAACCGAGACCTCATCATCGCGGGCGGCGGGCGCGTCGGCTTCCAGACGGCTGAACTCCTCGCCGACCGCGG
CCACGACGTGACGATCATCGAGCGCGACACCCGCGTCGTCGACGACATCGCCGATCAGTGGATGGCGACCGTCATCGAAG
GCGACGCCACCAACCCCGCGATCATCGAACAGGCGGGCGTCGACCGGGCGGACGGGATCGCGGCGCTCACCGGCGAAACC
GGGTTGAACCTCGCGGTCTGCCTGGCTGCCGCCGAGCTCACGCCGTCGATCCGCACCATCGCGCGCATCGACCACGGGGT
GCGTGATTCGTACACCCGGTTCGTCGACGCCGTGGTGTTCCCCGAACGCGCCGGCGCACGCGTCGCGGCCAACGAGATCA
TCGGCGATGACGTCCAGACGCTGGCCGACATCACCGGCGACCTGGAGCTCATGCTCGTCCGGGTCGCCGACGGCGCGCCC
GCCGCCGGCAAGCAGCTGCGCGACGTTCGGTTCCCGGCTGGGACAGTGATCATCTCCGGCGCGGACGGCCAACGGATCGC
ACGCCCGGACACGACGCTCACGCCGGGCAGCCGATACATCATCGCCGTTGAGCCCGACGTCGCCGGGGAGGCCATGGACC
TGATCCAGGGCTGA

Upstream 100 bases:

>100_bases
CTGGGGACGGCTGCCTACTACGCACACGCCAGCCGGCAGTCGGCCGCCGGCGACGACGAGGACACCACGACTATTTCGGC
GGACGCCGAACACACGCCAC

Downstream 100 bases:

>100_bases
CTACTCGTCGGCGTCGCCCGCGACCTCATGCAGGGCGTTCGTGACCGTCCCGTGTTCGGCGGCGTGTGGCCTGCTCGCGG
TGTCGCTGTACCCCTCTTCG

Product: TRK potassium uptake system protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog [H]

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTTNRDLIIAGGGRVGFQTAELLADRGHDVTIIERDTRVVDDIADQWMATVIEGDATNPAIIEQAGVDRADGIAALTGET
GLNLAVCLAAAELTPSIRTIARIDHGVRDSYTRFVDAVVFPERAGARVAANEIIGDDVQTLADITGDLELMLVRVADGAP
AAGKQLRDVRFPAGTVIISGADGQRIARPDTTLTPGSRYIIAVEPDVAGEAMDLIQG

Sequences:

>Translated_217_residues
MTTNRDLIIAGGGRVGFQTAELLADRGHDVTIIERDTRVVDDIADQWMATVIEGDATNPAIIEQAGVDRADGIAALTGET
GLNLAVCLAAAELTPSIRTIARIDHGVRDSYTRFVDAVVFPERAGARVAANEIIGDDVQTLADITGDLELMLVRVADGAP
AAGKQLRDVRFPAGTVIISGADGQRIARPDTTLTPGSRYIIAVEPDVAGEAMDLIQG
>Mature_216_residues
TTNRDLIIAGGGRVGFQTAELLADRGHDVTIIERDTRVVDDIADQWMATVIEGDATNPAIIEQAGVDRADGIAALTGETG
LNLAVCLAAAELTPSIRTIARIDHGVRDSYTRFVDAVVFPERAGARVAANEIIGDDVQTLADITGDLELMLVRVADGAPA
AGKQLRDVRFPAGTVIISGADGQRIARPDTTLTPGSRYIIAVEPDVAGEAMDLIQG

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=183, Percent_Identity=26.775956284153, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 22814; Mature: 22683

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNRDLIIAGGGRVGFQTAELLADRGHDVTIIERDTRVVDDIADQWMATVIEGDATNPA
CCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCH
IIEQAGVDRADGIAALTGETGLNLAVCLAAAELTPSIRTIARIDHGVRDSYTRFVDAVVF
HHHHCCCCCCCCEEEEECCCCCCHHHEEEHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCC
PERAGARVAANEIIGDDVQTLADITGDLELMLVRVADGAPAAGKQLRDVRFPAGTVIISG
CCCCCCEEHHHHHHCCHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHEECCCCEEEEEC
ADGQRIARPDTTLTPGSRYIIAVEPDVAGEAMDLIQG
CCCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHCC
>Mature Secondary Structure 
TTNRDLIIAGGGRVGFQTAELLADRGHDVTIIERDTRVVDDIADQWMATVIEGDATNPA
CCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCH
IIEQAGVDRADGIAALTGETGLNLAVCLAAAELTPSIRTIARIDHGVRDSYTRFVDAVVF
HHHHCCCCCCCCEEEEECCCCCCHHHEEEHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCC
PERAGARVAANEIIGDDVQTLADITGDLELMLVRVADGAPAAGKQLRDVRFPAGTVIISG
CCCCCCEEHHHHHHCCHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHEECCCCEEEEEC
ADGQRIARPDTTLTPGSRYIIAVEPDVAGEAMDLIQG
CCCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]