| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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The map label for this gene is iucA
Identifier: 16120151
GI number: 16120151
Start: 173679
End: 175502
Strand: Direct
Name: iucA
Synonym: VNG6212G
Alternate gene names: 16120151
Gene position: 173679-175502 (Clockwise)
Preceding gene: 16120150
Following gene: 16120152
Centisome position: 47.53
GC content: 72.2
Gene sequence:
>1824_bases ATGACCGGTGTCGGTGCGGTGGCGGACACGCCGGCCGCGCACGCCGAGTCCGCCACCCTGCACGCGTTCCTCAACTGCTA CCTCAGGGAGACCGACGCCGGCGAGGTCGTCTCCCCGAGGGCTGTCCCCGACGGCGTGCCGGCCGGCGCACAGCGGGCCG ACCGCCGGGTCGTCCGCGTGCCGTTCCCAGCCCAGTCGACGACCGTGTTCGCCCCGTTGCGGTACGCGTCGGCCACTGGC CGCCACCTGTTCGCGGTGCCGGCGTACGCCCGCCCCGGCGTGCCTGACGCGCCGGCCGGGACGCCGTCCCCGATCGACGC GGCGGGCGTCGCGTCGCTGGCGCGCCGCGAGCTCGCGCTCGATGGCGACGACCCGACCGCGGGCCGGGACCTCTTGGAGC GCGTGTTGGCCTCACAGACCGCGACCGAGCGCTTCGTTGCCGCCCGGGATACGCCACGCGACCACGAGCGGCTGTACGAC ACGACGGTGTCGTTCCGGGACGCCGAGCAGTCGCTGGTGTACGGCCACCACATGCATCCGACGCCGAACAGCCGTACCGG GATCCCGCCACACGAGCAGTCGCGGTACGCGCCGGAGCTGCGAGCCGGCTTCCAGTTGCGGGTTTTCGCCGCTGATCCGG CGCTCGTGGAGACGTGGGCCGCCGGGGACGCGTCCGCGACGGAGTGGCTCCGGTCGGTGGTGGCCGACGCCACCACCGTG CCCCCCGAGTCGGAGGCCACGCTGGTGCCTGTCCATCCGTGGCAGGCCGACTACCTGCACGCACAGCCACACGTCGCGGC GGCGATAGCGCGCGACGAACTCCGTGACCTGGGCGCGTTCGGCCCGACGTTCTACCCCACGTCGTCGGTGCGGACGCTGT GGAGCCCGGACGCCCCGTTCATGTACAAGGGGTCACTGGCGGTGGAGATCACCAACGCCGAGCGAACCAACAAGCGCCCG GAGCTGGCGCGCGGGGTCGCCGTCTCGGAGCTGCTCGCGACCGGGTTCGGGGACGCCTTCGCCGACCGGTTCCCCGCGTT CTCGATCATCGAGGACCCCGCCGCGATCACGCTCACACTGGGCGACGGCGCTGAGTCCGGGTTCGAGGCCGTGCTGCGCG AGAACCCCTTCGCCGGCGATGACACGGACAACGTCACCCCGGTCGCGGCGCTCTGCCAGGACGGCCTGGACGGCCCCGCA CGGGCGGCCCGCATCGTGTCGCGGATCGCCACGCGTGAGGGGCGCACCGAGAGCGCGGTCGCCCGCGAGTGGTTCGAGCA GTACCTCGCGCACACGGTCCGGCCGGTCGTCTGGCTGTACTTCCAGCAGGGCGTCGGCTTGGAAGCCCACCAGCAGAACA CGCTCGTTCGGCTCGACGACGACGGCCGCCCGACGGCCGGGTTCTACCGGGACAACCAGGGGTACTACTTCCCGGCGTCC CAGGCGGCCGACGTCGACGACTGGCTGCCCGGCGTCTGCGAGCGCGCCGACACCGTCTGCCCGGACGCCATCGCGGACGA ACGCCTCCGGTACTACATCGTGTTCAACAACGCCTTCGGCGTCGTGAACGCGCTCGGCGCGGGCGGCGTCGTGGACGAGC GCGCGTTGCTCGCGGTGCTGCGCACGGAACTGGAGTCGTTGGCGGAGCACGAACCCGCCGACTCGACGCTGGTGTCGGCG CTGCTGACCGAGCGCCGCGTGCCCTGCAAGGCGAACCTGCTCACGCGGTTCGAGGAGCGCGACGAACTCGAAGCCGACCT CGAAACGCAGTCCGTCTACACGGCCATCGAGAACCCGCTGGTCACGCGGGTGGACACACAATGA
Upstream 100 bases:
>100_bases CCGACATCCAGTCGGTACTCGTTGCGTTCAAAGGACACGCCGCGACGATCGAGGCGGCCGACCGGACCGCTCCGATCACG ACCGCCGCCGGGGGCGACCA
Downstream 100 bases:
>100_bases CAGCGCCACTGCCCCGAATCACGAGCGACTACGCGTATCGCCGCCCTGACCCCCAGATCGACCGCACCGTCGCGTTCCGG CGGGTGGCACTCGACCGCGA
Product: iron transport protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 607; Mature: 606
Protein sequence:
>607_residues MTGVGAVADTPAAHAESATLHAFLNCYLRETDAGEVVSPRAVPDGVPAGAQRADRRVVRVPFPAQSTTVFAPLRYASATG RHLFAVPAYARPGVPDAPAGTPSPIDAAGVASLARRELALDGDDPTAGRDLLERVLASQTATERFVAARDTPRDHERLYD TTVSFRDAEQSLVYGHHMHPTPNSRTGIPPHEQSRYAPELRAGFQLRVFAADPALVETWAAGDASATEWLRSVVADATTV PPESEATLVPVHPWQADYLHAQPHVAAAIARDELRDLGAFGPTFYPTSSVRTLWSPDAPFMYKGSLAVEITNAERTNKRP ELARGVAVSELLATGFGDAFADRFPAFSIIEDPAAITLTLGDGAESGFEAVLRENPFAGDDTDNVTPVAALCQDGLDGPA RAARIVSRIATREGRTESAVAREWFEQYLAHTVRPVVWLYFQQGVGLEAHQQNTLVRLDDDGRPTAGFYRDNQGYYFPAS QAADVDDWLPGVCERADTVCPDAIADERLRYYIVFNNAFGVVNALGAGGVVDERALLAVLRTELESLAEHEPADSTLVSA LLTERRVPCKANLLTRFEERDELEADLETQSVYTAIENPLVTRVDTQ
Sequences:
>Translated_607_residues MTGVGAVADTPAAHAESATLHAFLNCYLRETDAGEVVSPRAVPDGVPAGAQRADRRVVRVPFPAQSTTVFAPLRYASATG RHLFAVPAYARPGVPDAPAGTPSPIDAAGVASLARRELALDGDDPTAGRDLLERVLASQTATERFVAARDTPRDHERLYD TTVSFRDAEQSLVYGHHMHPTPNSRTGIPPHEQSRYAPELRAGFQLRVFAADPALVETWAAGDASATEWLRSVVADATTV PPESEATLVPVHPWQADYLHAQPHVAAAIARDELRDLGAFGPTFYPTSSVRTLWSPDAPFMYKGSLAVEITNAERTNKRP ELARGVAVSELLATGFGDAFADRFPAFSIIEDPAAITLTLGDGAESGFEAVLRENPFAGDDTDNVTPVAALCQDGLDGPA RAARIVSRIATREGRTESAVAREWFEQYLAHTVRPVVWLYFQQGVGLEAHQQNTLVRLDDDGRPTAGFYRDNQGYYFPAS QAADVDDWLPGVCERADTVCPDAIADERLRYYIVFNNAFGVVNALGAGGVVDERALLAVLRTELESLAEHEPADSTLVSA LLTERRVPCKANLLTRFEERDELEADLETQSVYTAIENPLVTRVDTQ >Mature_606_residues TGVGAVADTPAAHAESATLHAFLNCYLRETDAGEVVSPRAVPDGVPAGAQRADRRVVRVPFPAQSTTVFAPLRYASATGR HLFAVPAYARPGVPDAPAGTPSPIDAAGVASLARRELALDGDDPTAGRDLLERVLASQTATERFVAARDTPRDHERLYDT TVSFRDAEQSLVYGHHMHPTPNSRTGIPPHEQSRYAPELRAGFQLRVFAADPALVETWAAGDASATEWLRSVVADATTVP PESEATLVPVHPWQADYLHAQPHVAAAIARDELRDLGAFGPTFYPTSSVRTLWSPDAPFMYKGSLAVEITNAERTNKRPE LARGVAVSELLATGFGDAFADRFPAFSIIEDPAAITLTLGDGAESGFEAVLRENPFAGDDTDNVTPVAALCQDGLDGPAR AARIVSRIATREGRTESAVAREWFEQYLAHTVRPVVWLYFQQGVGLEAHQQNTLVRLDDDGRPTAGFYRDNQGYYFPASQ AADVDDWLPGVCERADTVCPDAIADERLRYYIVFNNAFGVVNALGAGGVVDERALLAVLRTELESLAEHEPADSTLVSAL LTERRVPCKANLLTRFEERDELEADLETQSVYTAIENPLVTRVDTQ
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: NA
Molecular weight: Translated: 65735; Mature: 65603
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVGAVADTPAAHAESATLHAFLNCYLRETDAGEVVSPRAVPDGVPAGAQRADRRVVRV CCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEE PFPAQSTTVFAPLRYASATGRHLFAVPAYARPGVPDAPAGTPSPIDAAGVASLARRELAL CCCCCCCEEEEEHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC DGDDPTAGRDLLERVLASQTATERFVAARDTPRDHERLYDTTVSFRDAEQSLVYGHHMHP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHCCHHHHHCCCCCCC TPNSRTGIPPHEQSRYAPELRAGFQLRVFAADPALVETWAAGDASATEWLRSVVADATTV CCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHCCCCC PPESEATLVPVHPWQADYLHAQPHVAAAIARDELRDLGAFGPTFYPTSSVRTLWSPDAPF CCCCCCEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCE MYKGSLAVEITNAERTNKRPELARGVAVSELLATGFGDAFADRFPAFSIIEDPAAITLTL EECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCEEEEEE GDGAESGFEAVLRENPFAGDDTDNVTPVAALCQDGLDGPARAARIVSRIATREGRTESAV CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHH AREWFEQYLAHTVRPVVWLYFQQGVGLEAHQQNTLVRLDDDGRPTAGFYRDNQGYYFPAS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCEEECCC QAADVDDWLPGVCERADTVCPDAIADERLRYYIVFNNAFGVVNALGAGGVVDERALLAVL CCCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHH RTELESLAEHEPADSTLVSALLTERRVPCKANLLTRFEERDELEADLETQSVYTAIENPL HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCE VTRVDTQ EEECCCC >Mature Secondary Structure TGVGAVADTPAAHAESATLHAFLNCYLRETDAGEVVSPRAVPDGVPAGAQRADRRVVRV CCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEE PFPAQSTTVFAPLRYASATGRHLFAVPAYARPGVPDAPAGTPSPIDAAGVASLARRELAL CCCCCCCEEEEEHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC DGDDPTAGRDLLERVLASQTATERFVAARDTPRDHERLYDTTVSFRDAEQSLVYGHHMHP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHCCHHHHHCCCCCCC TPNSRTGIPPHEQSRYAPELRAGFQLRVFAADPALVETWAAGDASATEWLRSVVADATTV CCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHCCCCC PPESEATLVPVHPWQADYLHAQPHVAAAIARDELRDLGAFGPTFYPTSSVRTLWSPDAPF CCCCCCEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCE MYKGSLAVEITNAERTNKRPELARGVAVSELLATGFGDAFADRFPAFSIIEDPAAITLTL EECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCEEEEEE GDGAESGFEAVLRENPFAGDDTDNVTPVAALCQDGLDGPARAARIVSRIATREGRTESAV CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHH AREWFEQYLAHTVRPVVWLYFQQGVGLEAHQQNTLVRLDDDGRPTAGFYRDNQGYYFPAS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCEEECCC QAADVDDWLPGVCERADTVCPDAIADERLRYYIVFNNAFGVVNALGAGGVVDERALLAVL CCCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHH RTELESLAEHEPADSTLVSALLTERRVPCKANLLTRFEERDELEADLETQSVYTAIENPL HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCE VTRVDTQ EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11274118; 11481432 [H]