| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120136
GI number: 16120136
Start: 162134
End: 162286
Strand: Direct
Name: Not Available
Synonym: VNG6194H
Alternate gene names: NA
Gene position: 162134-162286 (Clockwise)
Preceding gene: 16120133
Following gene: 16120138
Centisome position: 44.37
GC content: 46.41
Gene sequence:
>153_bases ATGCCGGAGATTGATCTTAATGAGGAGACAGTCAACCGACTCGACAATCTACGAGTCGACGACGAATCCTATGACGAAAT CACCAATGAACTCATCAATATCTACGAGGCAGAAGAACTGACTCTTTCGTTTGCCGGAGATCGGCTGGAGTAA
Upstream 100 bases:
>100_bases CGTAGGTAGCTTCGGTTGAGTGACTGGGCTGTGCTCCCCAGCACTTCTTCAGTCAATCCGCTTCGTGAGTTTTACGAACA ACAGACCCCAGACTCCGAAT
Downstream 100 bases:
>100_bases TCAGAGAATCTGTCGACCGACAGGCGCGGTTGGCATTCTGCCGATATTGCCTCCGCCAGGGAGTTCTGACACGCAGTTCG CACAGTACCTGTATTCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MPEIDLNEETVNRLDNLRVDDESYDEITNELINIYEAEELTLSFAGDRLE
Sequences:
>Translated_50_residues MPEIDLNEETVNRLDNLRVDDESYDEITNELINIYEAEELTLSFAGDRLE >Mature_49_residues PEIDLNEETVNRLDNLRVDDESYDEITNELINIYEAEELTLSFAGDRLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5860; Mature: 5729
Theoretical pI: Translated: 3.48; Mature: 3.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIDLNEETVNRLDNLRVDDESYDEITNELINIYEAEELTLSFAGDRLE CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHEECCCCCCC >Mature Secondary Structure PEIDLNEETVNRLDNLRVDDESYDEITNELINIYEAEELTLSFAGDRLE CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA