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Identifier: 16120130

GI number: 16120130

Start: 158877

End: 159224

Strand: Direct

Name: Not Available

Synonym: VNG6186H

Alternate gene names: NA

Gene position: 158877-159224 (Clockwise)

Preceding gene: 16120124

Following gene: 16120131

Centisome position: 43.48

GC content: 62.64

Gene sequence:

>348_bases
ATGCATCAAGTCGACGACGCCGGCGCCGTTGCGACCGAGATGGTTGTGCGACGACCGGGCTTTCGACGGGACAAAGAACC
AGTTCTCCCCGTCGACATCGCCTACATCGACCGCGTCATCCCACTCGCCCGGCAGCGTTCGACCCCGCCGTTCATCGAGG
ACGTCCAGCGGGACTGTCTCGACCGGCTCGATGCCACGCGGTCACCAGACGCAGTGCTCGGACGGCTTGAACGAGCAGTC
AACGAACTGCAGGCGGGCAACATAGCAGTGAGCGGCTCGTCGAGCGAAATCATGTCTCCAAGCCGCTGGAAGGCTACTCA
CAGAATACCCAGAACGTGGCGGCGTTGA

Upstream 100 bases:

>100_bases
ATAACACATCTGATTGAAATCTAAATAAGATAGCTCGAAAAGGATAGTTCGGCGGCTTGAGTGTCCATGCTCAATCAAGA
ACTGCGCAAGGAGACGTTGA

Downstream 100 bases:

>100_bases
AATGACGAGGTGATTCTAACCACAGCTGAACTCGCAGCTGAAGAACACGGTGACGCTCGACGGGCAGTCCGACTGTTCCG
GAATGCGGGCGAGATCGCCG

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase I; DNA Polymerase B Region

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MHQVDDAGAVATEMVVRRPGFRRDKEPVLPVDIAYIDRVIPLARQRSTPPFIEDVQRDCLDRLDATRSPDAVLGRLERAV
NELQAGNIAVSGSSSEIMSPSRWKATHRIPRTWRR

Sequences:

>Translated_115_residues
MHQVDDAGAVATEMVVRRPGFRRDKEPVLPVDIAYIDRVIPLARQRSTPPFIEDVQRDCLDRLDATRSPDAVLGRLERAV
NELQAGNIAVSGSSSEIMSPSRWKATHRIPRTWRR
>Mature_115_residues
MHQVDDAGAVATEMVVRRPGFRRDKEPVLPVDIAYIDRVIPLARQRSTPPFIEDVQRDCLDRLDATRSPDAVLGRLERAV
NELQAGNIAVSGSSSEIMSPSRWKATHRIPRTWRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 13015; Mature: 13015

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQVDDAGAVATEMVVRRPGFRRDKEPVLPVDIAYIDRVIPLARQRSTPPFIEDVQRDCL
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DRLDATRSPDAVLGRLERAVNELQAGNIAVSGSSSEIMSPSRWKATHRIPRTWRR
HHHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHQVDDAGAVATEMVVRRPGFRRDKEPVLPVDIAYIDRVIPLARQRSTPPFIEDVQRDCL
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DRLDATRSPDAVLGRLERAVNELQAGNIAVSGSSSEIMSPSRWKATHRIPRTWRR
HHHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA