| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120127
GI number: 16120127
Start: 156312
End: 157388
Strand: Reverse
Name: Not Available
Synonym: VNG6183C
Alternate gene names: NA
Gene position: 157388-156312 (Counterclockwise)
Preceding gene: 16120128
Following gene: 16120126
Centisome position: 43.07
GC content: 53.67
Gene sequence:
>1077_bases ATGCCTGAACTGTCCGAGACAGCGGAACGATCTCAGTCGAACACTCCGCTGGCAATGATAATGGATGACTCGGATATCGA CTACCAGCGATTCCAGGAACTGGTAGCCTCCACTGATTCACTCGCGATTCTTTGCCACGATAATCCCGACCCAGACACGC TCGCCAGTGCCCTCGCACTGGAAGCGATTGCCAAGGAGTGGGAGGTCCCGACCGTGGATATCGTATACGGTGGGACAGTT ACGCATCAACAGAATCGAGCGATGATCAATGTTCTCGATATAGAGCTAACACCGATTGATCAGGTTTCACTCTCTGACTA TGGTCTAGTCGCGTTCGTTGATCACGGTATTCCGGGACAAAACAATTCTGCTGTTGAAGAGATGACGCCGGATATCATCA TTGACCATCACCCAACTGATGGCCTCCAGGGCCAGTTCGTAGATCTTCGACCTGCTGTTGGGGCAACGGCCACGCTTCTA ACCCGGTACTTGGAGATATTTAGTATTGAACTTGAAGAACGCCTCGCTACCGCACTCTTGTTCGCACTCCACCGTGAAAC GCTGGATTTCAACCGTGAGACGACATCTACGGAACATGCAGCTGCGTGTGTGCTCCACCCGCATGCAGATCACAATATCA TCGAAGAGTTGACCAACTCGGTGTTCACACCTGAGACGATTAGCGGAATCGGCGATGCGATTGCCAATCGAGAGGTCCGG GGCTCCTGCCTCGTGTCCTCTCTCGGATGGATTCGTGAACGCGACGCTGTTCCACAGGCTGCTGATTACCTTCTCCAGTT GGAGGGTGTGAGTACGACCATTGTGTACGGCATCGTAGATGACAACGTCCACCTCAGTGGTAGAACGAGCAATTCCCAGC TTCATATTGGCAACGTGATGGAAGAAACGTTCGATCAGGTCGGGAGTGCCGGTGGCCACCACGATATGGCCGGTGGACAG GTTCCCCTCGGCTTCATCGGGTCGGTTGACGACGGTGATGACGTAGCAATCGACCTGATCAACCAGTCGATGATGGCCCG CCTCTTCGGCGCGCTAGAAGGGTGGACAGAAACATGA
Upstream 100 bases:
>100_bases CGTCTCATGCGCTCAGCTCGGTTTACTACCGGTGGAAACGGGCTATCGAACGCACGTCTGTTGGTGAGGATTCGCCAGTT CTTGAGGATGACTTTTGAGC
Downstream 100 bases:
>100_bases CCAATGAACTCGAGTTGCAGAAGAACGGGGTTCAGTGTACGAGACTGACGCGATTGACGCACAGCTGCTCACCGATCTCC TGCTCAATGCACGACAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MPELSETAERSQSNTPLAMIMDDSDIDYQRFQELVASTDSLAILCHDNPDPDTLASALALEAIAKEWEVPTVDIVYGGTV THQQNRAMINVLDIELTPIDQVSLSDYGLVAFVDHGIPGQNNSAVEEMTPDIIIDHHPTDGLQGQFVDLRPAVGATATLL TRYLEIFSIELEERLATALLFALHRETLDFNRETTSTEHAAACVLHPHADHNIIEELTNSVFTPETISGIGDAIANREVR GSCLVSSLGWIRERDAVPQAADYLLQLEGVSTTIVYGIVDDNVHLSGRTSNSQLHIGNVMEETFDQVGSAGGHHDMAGGQ VPLGFIGSVDDGDDVAIDLINQSMMARLFGALEGWTET
Sequences:
>Translated_358_residues MPELSETAERSQSNTPLAMIMDDSDIDYQRFQELVASTDSLAILCHDNPDPDTLASALALEAIAKEWEVPTVDIVYGGTV THQQNRAMINVLDIELTPIDQVSLSDYGLVAFVDHGIPGQNNSAVEEMTPDIIIDHHPTDGLQGQFVDLRPAVGATATLL TRYLEIFSIELEERLATALLFALHRETLDFNRETTSTEHAAACVLHPHADHNIIEELTNSVFTPETISGIGDAIANREVR GSCLVSSLGWIRERDAVPQAADYLLQLEGVSTTIVYGIVDDNVHLSGRTSNSQLHIGNVMEETFDQVGSAGGHHDMAGGQ VPLGFIGSVDDGDDVAIDLINQSMMARLFGALEGWTET >Mature_357_residues PELSETAERSQSNTPLAMIMDDSDIDYQRFQELVASTDSLAILCHDNPDPDTLASALALEAIAKEWEVPTVDIVYGGTVT HQQNRAMINVLDIELTPIDQVSLSDYGLVAFVDHGIPGQNNSAVEEMTPDIIIDHHPTDGLQGQFVDLRPAVGATATLLT RYLEIFSIELEERLATALLFALHRETLDFNRETTSTEHAAACVLHPHADHNIIEELTNSVFTPETISGIGDAIANREVRG SCLVSSLGWIRERDAVPQAADYLLQLEGVSTTIVYGIVDDNVHLSGRTSNSQLHIGNVMEETFDQVGSAGGHHDMAGGQV PLGFIGSVDDGDDVAIDLINQSMMARLFGALEGWTET
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR003156 - InterPro: IPR001667 - InterPro: IPR003148 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 38857; Mature: 38725
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELSETAERSQSNTPLAMIMDDSDIDYQRFQELVASTDSLAILCHDNPDPDTLASALAL CCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH EAIAKEWEVPTVDIVYGGTVTHQQNRAMINVLDIELTPIDQVSLSDYGLVAFVDHGIPGQ HHHHHHCCCCEEEEEECCEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCC NNSAVEEMTPDIIIDHHPTDGLQGQFVDLRPAVGATATLLTRYLEIFSIELEERLATALL CCCHHHHCCCCEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FALHRETLDFNRETTSTEHAAACVLHPHADHNIIEELTNSVFTPETISGIGDAIANREVR HHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC GSCLVSSLGWIRERDAVPQAADYLLQLEGVSTTIVYGIVDDNVHLSGRTSNSQLHIGNVM HHHHHHHHHHHHHHCCCCHHHHHHEEECCCCEEEEEEEEECCEEEECCCCCCEEEEHHHH EETFDQVGSAGGHHDMAGGQVPLGFIGSVDDGDDVAIDLINQSMMARLFGALEGWTET HHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PELSETAERSQSNTPLAMIMDDSDIDYQRFQELVASTDSLAILCHDNPDPDTLASALAL CCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH EAIAKEWEVPTVDIVYGGTVTHQQNRAMINVLDIELTPIDQVSLSDYGLVAFVDHGIPGQ HHHHHHCCCCEEEEEECCEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCC NNSAVEEMTPDIIIDHHPTDGLQGQFVDLRPAVGATATLLTRYLEIFSIELEERLATALL CCCHHHHCCCCEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FALHRETLDFNRETTSTEHAAACVLHPHADHNIIEELTNSVFTPETISGIGDAIANREVR HHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC GSCLVSSLGWIRERDAVPQAADYLLQLEGVSTTIVYGIVDDNVHLSGRTSNSQLHIGNVM HHHHHHHHHHHHHHCCCCHHHHHHEEECCCCEEEEEEEEECCEEEECCCCCCEEEEHHHH EETFDQVGSAGGHHDMAGGQVPLGFIGSVDDGDDVAIDLINQSMMARLFGALEGWTET HHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]