Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16120125

GI number: 16120125

Start: 154368

End: 155246

Strand: Reverse

Name: Not Available

Synonym: VNG6181H

Alternate gene names: 16120125

Gene position: 155246-154368 (Counterclockwise)

Preceding gene: 16120126

Following gene: 16120119

Centisome position: 42.48

GC content: 62.23

Gene sequence:

>879_bases
ATGCCAGCACAGCCGAACCCTGAACAGCGGGACTGGTTGGAAGCGTTGAACGCGGGAGACGCCACGATGGGCGAAAGTCG
GCTGTTCGAGCGGGACGGAACGTGGTATCTCCACGTCACCGCCACCCGCGACGTAGAGGAACGCTCCGATGTGTCCGCCG
AAGAACGGACGCCCATCGGAGTGGACATCGGGGAAGCGTCACTCGCCACGGTGTGTCACCGCGACGGCCACGGTTCTCCG
ACCGCGCCCGAACTGTGGGCCGACGAGGGCAAGACCGTTCGTCGGCTCCGCAAGACCTACTTCACCGCCACACGACGACT
CCAGACGCGCGGAAGCGAGCGTATCGTGGAGTCCTTCGGGGACGACATATGGGACCAGATAGACGACGTATTCCACCGCG
TCACCCGCGAGGTCGTGGAGTACGCCGAGTCCGTCGAGAACCCGGTTCTCGTTTTAGAAGACCTGACGTACATACGGGAG
TCGATGGACTACGGTGAGTACATGAATCGGCGTCTCCACGGATGGGGATTCGCCAAACTCCACGCGCAGATACGCTACAA
GGCCGTCGAGAAGGGCATCCCCGTCGAGACGGTGAACCCGTGCAACACGTCGAAAGAGTGCCACGCTTGCGGTGAAGTGG
GGTATCGCCCGCGACAGGCGACGTTCAAGTGTACGAACGACGCTTGCTGGATGGGCGAGTCCCAAGCGGACGTGAACGGC
GCGATAAACATCGCAGACCGCTACCTCAGCGGAGAGAGCCATTCAAGAGAACACACGGATGGCGATGACTCGGCTGGGGA
TGGGGGGCGTTTGACCGCCCCGCAAGACACCCTAGCCGATGCTACCACGCAGGAGACGCTTGGGACGTATGCGTCTTGA

Upstream 100 bases:

>100_bases
CGTCCGCTTCACGAACGGAGGGCTACGACTCGACCACAAGCCCGAGAACGCCATCGAGTGGTACGTCAAAATCCCGCACC
ACGAGGACTACCACCTCTGG

Downstream 100 bases:

>100_bases
AACCATAGGGCCACGCCCGGCCTGAAATCCCGTGGTGGGATTCCCGCGTCTTCAGGCGCGGGAGGAGGTCAATACGGGCG
GCTCGGATTTCTCTCGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MPAQPNPEQRDWLEALNAGDATMGESRLFERDGTWYLHVTATRDVEERSDVSAEERTPIGVDIGEASLATVCHRDGHGSP
TAPELWADEGKTVRRLRKTYFTATRRLQTRGSERIVESFGDDIWDQIDDVFHRVTREVVEYAESVENPVLVLEDLTYIRE
SMDYGEYMNRRLHGWGFAKLHAQIRYKAVEKGIPVETVNPCNTSKECHACGEVGYRPRQATFKCTNDACWMGESQADVNG
AINIADRYLSGESHSREHTDGDDSAGDGGRLTAPQDTLADATTQETLGTYAS

Sequences:

>Translated_292_residues
MPAQPNPEQRDWLEALNAGDATMGESRLFERDGTWYLHVTATRDVEERSDVSAEERTPIGVDIGEASLATVCHRDGHGSP
TAPELWADEGKTVRRLRKTYFTATRRLQTRGSERIVESFGDDIWDQIDDVFHRVTREVVEYAESVENPVLVLEDLTYIRE
SMDYGEYMNRRLHGWGFAKLHAQIRYKAVEKGIPVETVNPCNTSKECHACGEVGYRPRQATFKCTNDACWMGESQADVNG
AINIADRYLSGESHSREHTDGDDSAGDGGRLTAPQDTLADATTQETLGTYAS
>Mature_291_residues
PAQPNPEQRDWLEALNAGDATMGESRLFERDGTWYLHVTATRDVEERSDVSAEERTPIGVDIGEASLATVCHRDGHGSPT
APELWADEGKTVRRLRKTYFTATRRLQTRGSERIVESFGDDIWDQIDDVFHRVTREVVEYAESVENPVLVLEDLTYIRES
MDYGEYMNRRLHGWGFAKLHAQIRYKAVEKGIPVETVNPCNTSKECHACGEVGYRPRQATFKCTNDACWMGESQADVNGA
INIADRYLSGESHSREHTDGDDSAGDGGRLTAPQDTLADATTQETLGTYAS

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095 [H]

Pfam domain/function: PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 32664; Mature: 32533

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAQPNPEQRDWLEALNAGDATMGESRLFERDGTWYLHVTATRDVEERSDVSAEERTPIG
CCCCCCCHHHHHHHHHCCCCCCCCHHHHEECCCCEEEEEEECCCCHHHHCCCHHHCCCCC
VDIGEASLATVCHRDGHGSPTAPELWADEGKTVRRLRKTYFTATRRLQTRGSERIVESFG
CCCCHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
DDIWDQIDDVFHRVTREVVEYAESVENPVLVLEDLTYIRESMDYGEYMNRRLHGWGFAKL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHCCCCHHHH
HAQIRYKAVEKGIPVETVNPCNTSKECHACGEVGYRPRQATFKCTNDACWMGESQADVNG
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
AINIADRYLSGESHSREHTDGDDSAGDGGRLTAPQDTLADATTQETLGTYAS
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PAQPNPEQRDWLEALNAGDATMGESRLFERDGTWYLHVTATRDVEERSDVSAEERTPIG
CCCCCCHHHHHHHHHCCCCCCCCHHHHEECCCCEEEEEEECCCCHHHHCCCHHHCCCCC
VDIGEASLATVCHRDGHGSPTAPELWADEGKTVRRLRKTYFTATRRLQTRGSERIVESFG
CCCCHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
DDIWDQIDDVFHRVTREVVEYAESVENPVLVLEDLTYIRESMDYGEYMNRRLHGWGFAKL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHCCCCHHHH
HAQIRYKAVEKGIPVETVNPCNTSKECHACGEVGYRPRQATFKCTNDACWMGESQADVNG
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
AINIADRYLSGESHSREHTDGDDSAGDGGRLTAPQDTLADATTQETLGTYAS
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]