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Identifier: 16120111

GI number: 16120111

Start: 139477

End: 139830

Strand: Direct

Name: Not Available

Synonym: VNG6163H

Alternate gene names: NA

Gene position: 139477-139830 (Clockwise)

Preceding gene: 16120109

Following gene: 16120117

Centisome position: 38.17

GC content: 61.3

Gene sequence:

>354_bases
ATGGTGATGTTCACCGAGGGGTACGACACCCCGGTGCTCGTTACGCGAAACGAACGAAACGAATTCACCGAATCGGTCGC
GACGGTCGCCGATGACCACCTGAAGTGCGAGCAAACCCGAATGGGGCCTCGGATCGTCGGCGAGGACAACTTCAAAATCA
GAGGCATCGAAGCCCGGCAGCGATCGACCCCGCCGTTCATCGAGGACGTCCAGCGGGACTGTCTCGACCGGCTCGATGCC
ACGCGGTCACCAGACGCAGTGCTCGGACGGCTTGAACGAGCAGTCAACGAACTGCAGGCGGGCAACGTAGCAGTGAGCGG
CTCGTCGAACGGAATTGTGTCTCCAAGCCGCTAG

Upstream 100 bases:

>100_bases
CAGCCATGGCACGGCCTCAACGACGCCAACCCCAGTTTTTTCACCGCGTCGGCTCGCGTTCCCGGCAGGCGGGCTGACTG
CGTTCGAGGGCGACACTCGG

Downstream 100 bases:

>100_bases
AGGGGTACTCTCAGAATACTCAGAACGTGGCCGCTTTGAAGCGAGCGCGTGAGCAGGAACTGGCAGTCCACCCGGGCCAG
GATATCGAGTACGTGGTCGT

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase I; DNA Polymerase B Region

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MVMFTEGYDTPVLVTRNERNEFTESVATVADDHLKCEQTRMGPRIVGEDNFKIRGIEARQRSTPPFIEDVQRDCLDRLDA
TRSPDAVLGRLERAVNELQAGNVAVSGSSNGIVSPSR

Sequences:

>Translated_117_residues
MVMFTEGYDTPVLVTRNERNEFTESVATVADDHLKCEQTRMGPRIVGEDNFKIRGIEARQRSTPPFIEDVQRDCLDRLDA
TRSPDAVLGRLERAVNELQAGNVAVSGSSNGIVSPSR
>Mature_117_residues
MVMFTEGYDTPVLVTRNERNEFTESVATVADDHLKCEQTRMGPRIVGEDNFKIRGIEARQRSTPPFIEDVQRDCLDRLDA
TRSPDAVLGRLERAVNELQAGNVAVSGSSNGIVSPSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 12979; Mature: 12979

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMFTEGYDTPVLVTRNERNEFTESVATVADDHLKCEQTRMGPRIVGEDNFKIRGIEARQ
CEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCC
RSTPPFIEDVQRDCLDRLDATRSPDAVLGRLERAVNELQAGNVAVSGSSNGIVSPSR
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MVMFTEGYDTPVLVTRNERNEFTESVATVADDHLKCEQTRMGPRIVGEDNFKIRGIEARQ
CEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCC
RSTPPFIEDVQRDCLDRLDATRSPDAVLGRLERAVNELQAGNVAVSGSSNGIVSPSR
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA