Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120095

GI number: 16120095

Start: 120237

End: 121358

Strand: Reverse

Name: Not Available

Synonym: VNG6145H

Alternate gene names: NA

Gene position: 121358-120237 (Counterclockwise)

Preceding gene: 16120096

Following gene: 16120094

Centisome position: 33.21

GC content: 62.83

Gene sequence:

>1122_bases
ATGTCCATCGACCAAGACGCAGCCGCACGGCGCATCATGGACCAGTTCGGTGAGGAGAGTCGCATCCCTTCCCTCAACAT
CGAGGAAGGCGACGTTGGCGTCCTCATCGCCTTCCCGATCGTCGGCCTGTTTGTCGCGGGCCTCACCGGCATCGAATCAC
TTGCTCTCCCGTTCGTCGCAGGGGGGTTCGGGTTCGGCGTTGCAATCGTCTACGTCTCGCCCGACCACCTCAACGCGTGG
ACGTGGACGAAAGACGTCTATCGCTACGTCAAGCGCCCCCAGATCACGTTCAGTTCCCCAGAGGAGGCCAACAGTAGTAC
CAACGAGACAGAGCGCAACGAGGGCGGGCTCGCGAACTACACGCCGTTCAAGCCCGACGAACGAACGCAGGACCTCACGA
ACATCGAACGGGCGTGGCCGGGGGCTGGTGCGATCCAGCGCGCCGACGGCACGATGGAGGCGTTCATCGAGATCGACCCG
GACAACATGGACTTCGCGATGTCCGACGACTGGGCCCAGCTCCAGGACGCCGGCGAGGAGTTCGCCAACAAGGAACTCGA
CTCCGAGCTCAAACTCCACGCGACAACCCGCTCATTTCCGGTGGAGCAGATCACCGAGACCATCGAGGAGCGCCTCACTG
ACGAAGACGTCACGGAGAACCCGATCTTCCGGGAACTCCTCGAGGAGTACCGGGAGACACGGCCGAAGGAGATGCGTGAC
CGGGGCATCCAGCAAGTCCGGTACTACATCGGCGTCCAAGTCAGCCCGATAGAGGTCTACGACCGCTTCCGCGACGAGGG
CACGCCGGCCGAGAAGCTGACCCAGTTCCCCGTCATCGGATTCCTCTTCAATCCGTTCGTGACCCGCCGAGAGGACCTTA
CCGACGTCGAGCGCCGTGCCCAGATGTTCGAGAAGCTGGACAGCCGAGTCAACGACGTGCGGTCGGAGTTCATCCAGCAG
GCCTCGGGGTGGTCCGCCCGCCGGCTCGGCACGGTCGAACTCTTCGTGTTGAATATGGACTTCTGGAACGGCCGCGAACA
CGACTACGACGAAGCCGAGCGCGTCGTTCGCGAACAACCGATCATCGGCCATTCACGCCGGGAGGATGCCCACGATGCGT
AA

Upstream 100 bases:

>100_bases
GGCGCAGAAAGCTGCATCTCGGGGCTCGAATAGCGACGAAGACAGCGGGACGCCGTCCTACCGGCGGACCGAGAACGACC
CTGGAAGCTACTAACAATCC

Downstream 100 bases:

>100_bases
CCTCGTCCTCCAGACGGGCAGCGGAGCCGTCGCCCAGCTCACGGAGTGGCTCACGAATCCGACGTCAGTCGAGGGTACAG
CCCTCTACATTCTGCTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSIDQDAAARRIMDQFGEESRIPSLNIEEGDVGVLIAFPIVGLFVAGLTGIESLALPFVAGGFGFGVAIVYVSPDHLNAW
TWTKDVYRYVKRPQITFSSPEEANSSTNETERNEGGLANYTPFKPDERTQDLTNIERAWPGAGAIQRADGTMEAFIEIDP
DNMDFAMSDDWAQLQDAGEEFANKELDSELKLHATTRSFPVEQITETIEERLTDEDVTENPIFRELLEEYRETRPKEMRD
RGIQQVRYYIGVQVSPIEVYDRFRDEGTPAEKLTQFPVIGFLFNPFVTRREDLTDVERRAQMFEKLDSRVNDVRSEFIQQ
ASGWSARRLGTVELFVLNMDFWNGREHDYDEAERVVREQPIIGHSRREDAHDA

Sequences:

>Translated_373_residues
MSIDQDAAARRIMDQFGEESRIPSLNIEEGDVGVLIAFPIVGLFVAGLTGIESLALPFVAGGFGFGVAIVYVSPDHLNAW
TWTKDVYRYVKRPQITFSSPEEANSSTNETERNEGGLANYTPFKPDERTQDLTNIERAWPGAGAIQRADGTMEAFIEIDP
DNMDFAMSDDWAQLQDAGEEFANKELDSELKLHATTRSFPVEQITETIEERLTDEDVTENPIFRELLEEYRETRPKEMRD
RGIQQVRYYIGVQVSPIEVYDRFRDEGTPAEKLTQFPVIGFLFNPFVTRREDLTDVERRAQMFEKLDSRVNDVRSEFIQQ
ASGWSARRLGTVELFVLNMDFWNGREHDYDEAERVVREQPIIGHSRREDAHDA
>Mature_372_residues
SIDQDAAARRIMDQFGEESRIPSLNIEEGDVGVLIAFPIVGLFVAGLTGIESLALPFVAGGFGFGVAIVYVSPDHLNAWT
WTKDVYRYVKRPQITFSSPEEANSSTNETERNEGGLANYTPFKPDERTQDLTNIERAWPGAGAIQRADGTMEAFIEIDPD
NMDFAMSDDWAQLQDAGEEFANKELDSELKLHATTRSFPVEQITETIEERLTDEDVTENPIFRELLEEYRETRPKEMRDR
GIQQVRYYIGVQVSPIEVYDRFRDEGTPAEKLTQFPVIGFLFNPFVTRREDLTDVERRAQMFEKLDSRVNDVRSEFIQQA
SGWSARRLGTVELFVLNMDFWNGREHDYDEAERVVREQPIIGHSRREDAHDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42707; Mature: 42576

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDQDAAARRIMDQFGEESRIPSLNIEEGDVGVLIAFPIVGLFVAGLTGIESLALPFVA
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
GGFGFGVAIVYVSPDHLNAWTWTKDVYRYVKRPQITFSSPEEANSSTNETERNEGGLANY
CCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEECCCHHCCCCCCCCCCCCCCCCCC
TPFKPDERTQDLTNIERAWPGAGAIQRADGTMEAFIEIDPDNMDFAMSDDWAQLQDAGEE
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
FANKELDSELKLHATTRSFPVEQITETIEERLTDEDVTENPIFRELLEEYRETRPKEMRD
HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
RGIQQVRYYIGVQVSPIEVYDRFRDEGTPAEKLTQFPVIGFLFNPFVTRREDLTDVERRA
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHH
QMFEKLDSRVNDVRSEFIQQASGWSARRLGTVELFVLNMDFWNGREHDYDEAERVVREQP
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCC
IIGHSRREDAHDA
CCCCCCCCCCCCC
>Mature Secondary Structure 
SIDQDAAARRIMDQFGEESRIPSLNIEEGDVGVLIAFPIVGLFVAGLTGIESLALPFVA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
GGFGFGVAIVYVSPDHLNAWTWTKDVYRYVKRPQITFSSPEEANSSTNETERNEGGLANY
CCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEECCCHHCCCCCCCCCCCCCCCCCC
TPFKPDERTQDLTNIERAWPGAGAIQRADGTMEAFIEIDPDNMDFAMSDDWAQLQDAGEE
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
FANKELDSELKLHATTRSFPVEQITETIEERLTDEDVTENPIFRELLEEYRETRPKEMRD
HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
RGIQQVRYYIGVQVSPIEVYDRFRDEGTPAEKLTQFPVIGFLFNPFVTRREDLTDVERRA
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHH
QMFEKLDSRVNDVRSEFIQQASGWSARRLGTVELFVLNMDFWNGREHDYDEAERVVREQP
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCC
IIGHSRREDAHDA
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA