| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120087
GI number: 16120087
Start: 103608
End: 105596
Strand: Direct
Name: Not Available
Synonym: VNG6135C
Alternate gene names: NA
Gene position: 103608-105596 (Clockwise)
Preceding gene: 16120086
Following gene: 16120088
Centisome position: 28.35
GC content: 57.82
Gene sequence:
>1989_bases ATGGCCCTCTGGGAGCGCGAGAAGGATACCGCACCGAAGCGGAATGAGTCCCAGCTCGAAGAGAAGTTTATCCGGCCGAT GTTCCGGAAGCTGGGCATCCCCTTCGAAGTCGAAGAGAGTACGAGCCGCACGCAGCGCCGGCCCGACTACGGCTTCTTCG ACACGGAGGATGCTGCGCGTGATGCGTTTGAACGTCGCGAGGAGGGCGGCGACTTCTACGAGAACGCCGTCGCAGTCGCC GACGCCAAGCGCTGGGGGCGTCCGCTGGACACGCGTGGCAGCGGCGAACACGAGCGCGACTTCGAGAACCCAAGCTACCA GATTCACGTCTACCTGCAAGAGACGCCGGCCCGCTGGGCTGTCCTGACTGACGGGAAGAAGTGGCGGCTCTATTACGGCC CGACCAGCCACCGCCTCGACTCCTACTACGAGGTGGATCTGCCGACGATTCTGGAGAGTGGCGACCTTGAGGACTTCAAG TATTTCTACCTCTTCTTCCGCCACGAGGCATTCCTCGATGACGGGAGCGGTGACTGCTTCCTCGACGACGTCTATGACGA GTCCAACGTCTTTGCTCAGGAGTTAGGGGAGGACCTCCAGGACAACATCTACGAGGCCATCAAGATTCTCTCGGAAGGAT ACCTCCAGTACCCCGAGAACGATCTCGATGAGGGCGATCTCGACCTCATTCACGACAGCTCCCTTATCTATCTGTATCGG CTCATCTTCGTCCTGTATGCCGAAGCTGAGGGTCGGGAACTGCTGGACACGAGCAACGAGATCTACGAGCAGTCCTACAG TCTAAACTCCCTCAAGCAGGAGATCGCCGAGGAACTCGATAGTGGCGATCCAAAGTACCGCGACTGGCAGGATAACCTCC AGTCCCGACTCGACGAGCTGTTCACCCTTATTAATAAGGGCAGCAAGTCCCGCGGCATCCCTGAGGAAGACCTCTACATT CCCGCTTACAACGGCGGTCTGTTCCGGACGGATCCGGACGAGGACGACAGCGCGGAGGCGAAATTCCTCGCCAATCACGA TGTCGGCGACGCCTACCTGGCGAAAGTCGTCGAACTCCTCACGCGGAGTAAGAACAACGACGGTGGCGGGAAGATCTTCG TCGATTACTCCTCACTCGACGTCCGTCACCTCGGGAGTATCTACGAGGGACTGCTGGAGTACCAGCTCAACGTCGCTGAC GAGCCGCTAGCTCTCGACGACGGTGAGTACGTCAGCGCCGACGAAGGTGACGACGTCGTCGTGCAGGAGGGCGAAGTGTA CCTGACGACAGACAGTGGGGAACGGAAGGCCACTGGCTCATACTACACGCCCGAGTATGTCGTCGAGTACATCGTCGAGA ACACGCTCGAACCACTCGTTGACGACATCCGCGCAGACCTCGCCGGCCGAAGTGCTCGGGGTGAAGATCGTGGCTTCGCG GAGGAGTTCGCCGAGCGCATCTTCGACCTGAAGATTCTTGACCCGGCAATGGGGAGTGGACACTTCCTCACGAGCGCCAT CGACTACCTGGCCCGTGAAATCATTGACGCCCAAGAGAGGCAAGCTGCACAACAGGGCATCGAGACAGTCAATCAAGATC ATGACATCAATTGGGCACGTCGGCAGGTGGCCCAGCGCTGTATCTACGGAGTTGACCTGAATCCGCTGGCTGTAGAGTTG GCTAAGGTTTCGTTGTGGCTGCGGACGCTCGCTGCTGAACAGCCGCTAGCTTTCCTTGACCACCACTTGAAGACCGGTAA CTCACTCGTTGGCTCAAACGTTGAGGAAATTGATGCCCTCGAACGCAATGGAGCTGCAGAGGCTGAGGGCCCCAATTCCA CGCTAATTGACTTCGGGATGACGTTTGAAGGGACGATGGAGAACTTGATGGCAATACACGCCGATCTCATCGCCATCGAA AACGAGGAACTTGAAGATGTGAAAGCAATGGAGAAAAAGTATCAGTACATCACAAAGCCGCTTAGTTAG
Upstream 100 bases:
>100_bases CGACCTGTTCTCGAACCACTACCTCGACGAGCACCTCCCCGAAACCGAAGAATGGGACGAGGTCAGCGACGAGGAACTCC AAGAGGCCTACGATGACATT
Downstream 100 bases:
>100_bases AACGTCTGCTTGCTGAAGGTGTGTCTACGACCCAGCAAGCAGACAGTGAGATTCACGAGGACCAGCTCCTTAACTTCCTC GTCAACTGCCTTGACGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 662; Mature: 661
Protein sequence:
>662_residues MALWEREKDTAPKRNESQLEEKFIRPMFRKLGIPFEVEESTSRTQRRPDYGFFDTEDAARDAFERREEGGDFYENAVAVA DAKRWGRPLDTRGSGEHERDFENPSYQIHVYLQETPARWAVLTDGKKWRLYYGPTSHRLDSYYEVDLPTILESGDLEDFK YFYLFFRHEAFLDDGSGDCFLDDVYDESNVFAQELGEDLQDNIYEAIKILSEGYLQYPENDLDEGDLDLIHDSSLIYLYR LIFVLYAEAEGRELLDTSNEIYEQSYSLNSLKQEIAEELDSGDPKYRDWQDNLQSRLDELFTLINKGSKSRGIPEEDLYI PAYNGGLFRTDPDEDDSAEAKFLANHDVGDAYLAKVVELLTRSKNNDGGGKIFVDYSSLDVRHLGSIYEGLLEYQLNVAD EPLALDDGEYVSADEGDDVVVQEGEVYLTTDSGERKATGSYYTPEYVVEYIVENTLEPLVDDIRADLAGRSARGEDRGFA EEFAERIFDLKILDPAMGSGHFLTSAIDYLAREIIDAQERQAAQQGIETVNQDHDINWARRQVAQRCIYGVDLNPLAVEL AKVSLWLRTLAAEQPLAFLDHHLKTGNSLVGSNVEEIDALERNGAAEAEGPNSTLIDFGMTFEGTMENLMAIHADLIAIE NEELEDVKAMEKKYQYITKPLS
Sequences:
>Translated_662_residues MALWEREKDTAPKRNESQLEEKFIRPMFRKLGIPFEVEESTSRTQRRPDYGFFDTEDAARDAFERREEGGDFYENAVAVA DAKRWGRPLDTRGSGEHERDFENPSYQIHVYLQETPARWAVLTDGKKWRLYYGPTSHRLDSYYEVDLPTILESGDLEDFK YFYLFFRHEAFLDDGSGDCFLDDVYDESNVFAQELGEDLQDNIYEAIKILSEGYLQYPENDLDEGDLDLIHDSSLIYLYR LIFVLYAEAEGRELLDTSNEIYEQSYSLNSLKQEIAEELDSGDPKYRDWQDNLQSRLDELFTLINKGSKSRGIPEEDLYI PAYNGGLFRTDPDEDDSAEAKFLANHDVGDAYLAKVVELLTRSKNNDGGGKIFVDYSSLDVRHLGSIYEGLLEYQLNVAD EPLALDDGEYVSADEGDDVVVQEGEVYLTTDSGERKATGSYYTPEYVVEYIVENTLEPLVDDIRADLAGRSARGEDRGFA EEFAERIFDLKILDPAMGSGHFLTSAIDYLAREIIDAQERQAAQQGIETVNQDHDINWARRQVAQRCIYGVDLNPLAVEL AKVSLWLRTLAAEQPLAFLDHHLKTGNSLVGSNVEEIDALERNGAAEAEGPNSTLIDFGMTFEGTMENLMAIHADLIAIE NEELEDVKAMEKKYQYITKPLS >Mature_661_residues ALWEREKDTAPKRNESQLEEKFIRPMFRKLGIPFEVEESTSRTQRRPDYGFFDTEDAARDAFERREEGGDFYENAVAVAD AKRWGRPLDTRGSGEHERDFENPSYQIHVYLQETPARWAVLTDGKKWRLYYGPTSHRLDSYYEVDLPTILESGDLEDFKY FYLFFRHEAFLDDGSGDCFLDDVYDESNVFAQELGEDLQDNIYEAIKILSEGYLQYPENDLDEGDLDLIHDSSLIYLYRL IFVLYAEAEGRELLDTSNEIYEQSYSLNSLKQEIAEELDSGDPKYRDWQDNLQSRLDELFTLINKGSKSRGIPEEDLYIP AYNGGLFRTDPDEDDSAEAKFLANHDVGDAYLAKVVELLTRSKNNDGGGKIFVDYSSLDVRHLGSIYEGLLEYQLNVADE PLALDDGEYVSADEGDDVVVQEGEVYLTTDSGERKATGSYYTPEYVVEYIVENTLEPLVDDIRADLAGRSARGEDRGFAE EFAERIFDLKILDPAMGSGHFLTSAIDYLAREIIDAQERQAAQQGIETVNQDHDINWARRQVAQRCIYGVDLNPLAVELA KVSLWLRTLAAEQPLAFLDHHLKTGNSLVGSNVEEIDALERNGAAEAEGPNSTLIDFGMTFEGTMENLMAIHADLIAIEN EELEDVKAMEKKYQYITKPLS
Specific function: Unknown
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR011639 [H]
Pfam domain/function: PF07669 Eco57I; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 75450; Mature: 75318
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALWEREKDTAPKRNESQLEEKFIRPMFRKLGIPFEVEESTSRTQRRPDYGFFDTEDAAR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCCCCHHHH DAFERREEGGDFYENAVAVADAKRWGRPLDTRGSGEHERDFENPSYQIHVYLQETPARWA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEE VLTDGKKWRLYYGPTSHRLDSYYEVDLPTILESGDLEDFKYFYLFFRHEAFLDDGSGDCF EEECCCEEEEEECCCCCCCCCEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEE LDDVYDESNVFAQELGEDLQDNIYEAIKILSEGYLQYPENDLDEGDLDLIHDSSLIYLYR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHH LIFVLYAEAEGRELLDTSNEIYEQSYSLNSLKQEIAEELDSGDPKYRDWQDNLQSRLDEL HHHHHHCCCCCCHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH FTLINKGSKSRGIPEEDLYIPAYNGGLFRTDPDEDDSAEAKFLANHDVGDAYLAKVVELL HHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHH TRSKNNDGGGKIFVDYSSLDVRHLGSIYEGLLEYQLNVADEPLALDDGEYVSADEGDDVV HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEE VQEGEVYLTTDSGERKATGSYYTPEYVVEYIVENTLEPLVDDIRADLAGRSARGEDRGFA EECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EEFAERIFDLKILDPAMGSGHFLTSAIDYLAREIIDAQERQAAQQGIETVNQDHDINWAR HHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RQVAQRCIYGVDLNPLAVELAKVSLWLRTLAAEQPLAFLDHHLKTGNSLVGSNVEEIDAL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHCCCHHHHHHH ERNGAAEAEGPNSTLIDFGMTFEGTMENLMAIHADLIAIENEELEDVKAMEKKYQYITKP HHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCC LS CC >Mature Secondary Structure ALWEREKDTAPKRNESQLEEKFIRPMFRKLGIPFEVEESTSRTQRRPDYGFFDTEDAAR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCCCCHHHH DAFERREEGGDFYENAVAVADAKRWGRPLDTRGSGEHERDFENPSYQIHVYLQETPARWA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEE VLTDGKKWRLYYGPTSHRLDSYYEVDLPTILESGDLEDFKYFYLFFRHEAFLDDGSGDCF EEECCCEEEEEECCCCCCCCCEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEE LDDVYDESNVFAQELGEDLQDNIYEAIKILSEGYLQYPENDLDEGDLDLIHDSSLIYLYR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHH LIFVLYAEAEGRELLDTSNEIYEQSYSLNSLKQEIAEELDSGDPKYRDWQDNLQSRLDEL HHHHHHCCCCCCHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH FTLINKGSKSRGIPEEDLYIPAYNGGLFRTDPDEDDSAEAKFLANHDVGDAYLAKVVELL HHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHH TRSKNNDGGGKIFVDYSSLDVRHLGSIYEGLLEYQLNVADEPLALDDGEYVSADEGDDVV HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEE VQEGEVYLTTDSGERKATGSYYTPEYVVEYIVENTLEPLVDDIRADLAGRSARGEDRGFA EECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EEFAERIFDLKILDPAMGSGHFLTSAIDYLAREIIDAQERQAAQQGIETVNQDHDINWAR HHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RQVAQRCIYGVDLNPLAVELAKVSLWLRTLAAEQPLAFLDHHLKTGNSLVGSNVEEIDAL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHCCCHHHHHHH ERNGAAEAEGPNSTLIDFGMTFEGTMENLMAIHADLIAIENEELEDVKAMEKKYQYITKP HHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCC LS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]