The gene/protein map for NC_002608 is currently unavailable.
Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16120058

GI number: 16120058

Start: 73259

End: 74656

Strand: Reverse

Name: Not Available

Synonym: VNG6097C

Alternate gene names: NA

Gene position: 74656-73259 (Counterclockwise)

Preceding gene: 16120059

Following gene: 16120057

Centisome position: 20.43

GC content: 50.5

Gene sequence:

>1398_bases
ATGGTTAACGCCAACATCTGGTCAAGGGATTTCAATCTTCGTAGCCGCATCGACGAGGATATTTTCGAGCACTTAGACCA
GATCGGGTTCGGGGAGATTGACAGAGGTACCGTGACCCAGACCCTGGCTCTCAACATTGATGGAACGTGCAGCACGGACG
CTCAGAAGAATCTCGATCCCGATGATGTCAGAGAGAACTGGGAGGATACCAAGGAGGCTATGATCTCCGCGATTGGCTAT
CTCAGAAAACAACACGGAGTGAAACGGTCCGAGTTCATTCCGTACGAAGGAATGATTCCTGTGCTCGCATATTATATGTA
TGAGACAGATCGCAGGAATGTCGATCCAGACCACCAGGAACAGATAGACCGCTGGTTCTGGCGGGTCGCTCTCTCGGGTC
GGTACAGCAGTTCTGCACAGACCAGAATGACTGAAGATAGCAAACTGGTCGACAGGATCATCGCAGGAGAAGATGTTGAA
ATCAACTTCACGCCGCAGATTAGCACAGAACGCCTCAAAACAACCAATATCAAGCGGTCCACTTCAGGCCTCAGGAATGC
ATTCCTCTGTCTCCTTGCACGGAACCGACCTCTTCACTTCGAGGACGGATCAGAAATTGACCTGACGGAAAACGAGTACG
CTGACTTCCGTCTCAACAAGCATCACATCTTTCCGAACGCCTATCTGCGGGGGTTAGACTACTCGAAAAAGGAACGGAAG
AGCATTATGGACATTACCTTCATTCCTGCCGAGCTTAACCGCCGTCTCTCGGACACCTCCGCAAAAGAGTACTTTGGAAG
ACTCGCAAATGATGTAAATGAGTTTGAGCGAATCATGGATTCGCACCTTATCCCCCATGACGAGGACTCGGGTATCTGGG
ACAACGATTATGATACGTTCCAGGAACAGAGGGCGGAACTCGTGTACTCCGAATTCATGGAACTGATCGGGGAGTATTCC
GCTCTCGAATCTGATCTCCGAAATGACCCACAGAGCGCCGTCAAAGAGACGGAGGTATTGGTTCGAGACTTCATTGACAG
AGAACTCGCTCTAGCAAGCGATGGAGGCACGTTCTGGGGTGAAGTCCCGAACGATGTGAACTCGAACGTTCAGCGGCGTA
TTAGCGAGGAGCAAGACAGTAATCCCGAGTTCACTGTTGACTCTGATCGAGACAAACTTGACTTCTGTAACGTGATGGAC
TACGCAAAGATCATCAACGCTCGCTGGGACGTTTTCGGGGATTATCTACCATCGAAATCAGCGGTTCAAACCCGGTTTGA
GGACTTCGCAGAATTCCGCAACGCCCTCGCTCATCACCGAGAAATCGATCGATTCACCGAAATGGATGGGCAGGTCGCCA
TCGAATGGATAAACAGCTGCATTACCGAAGAGTACTGA

Upstream 100 bases:

>100_bases
CTAGCTAAATTAATATCGGATTGGTCTTGGGCGAATAGAAATCTTCTCTTCACTGTTCAGCCCTACGCCATGTGGCGGTT
TCGCTCTTAACTAAAGACGA

Downstream 100 bases:

>100_bases
ACCACCTTCGGTTAGGGGCCGGAGAAACGCTCTCCAGTATTCCGGTTCTGACTCTCGGAACGTACCGTCTAGAAGTGGTT
CAGGAACTGAATTTAGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MVNANIWSRDFNLRSRIDEDIFEHLDQIGFGEIDRGTVTQTLALNIDGTCSTDAQKNLDPDDVRENWEDTKEAMISAIGY
LRKQHGVKRSEFIPYEGMIPVLAYYMYETDRRNVDPDHQEQIDRWFWRVALSGRYSSSAQTRMTEDSKLVDRIIAGEDVE
INFTPQISTERLKTTNIKRSTSGLRNAFLCLLARNRPLHFEDGSEIDLTENEYADFRLNKHHIFPNAYLRGLDYSKKERK
SIMDITFIPAELNRRLSDTSAKEYFGRLANDVNEFERIMDSHLIPHDEDSGIWDNDYDTFQEQRAELVYSEFMELIGEYS
ALESDLRNDPQSAVKETEVLVRDFIDRELALASDGGTFWGEVPNDVNSNVQRRISEEQDSNPEFTVDSDRDKLDFCNVMD
YAKIINARWDVFGDYLPSKSAVQTRFEDFAEFRNALAHHREIDRFTEMDGQVAIEWINSCITEEY

Sequences:

>Translated_465_residues
MVNANIWSRDFNLRSRIDEDIFEHLDQIGFGEIDRGTVTQTLALNIDGTCSTDAQKNLDPDDVRENWEDTKEAMISAIGY
LRKQHGVKRSEFIPYEGMIPVLAYYMYETDRRNVDPDHQEQIDRWFWRVALSGRYSSSAQTRMTEDSKLVDRIIAGEDVE
INFTPQISTERLKTTNIKRSTSGLRNAFLCLLARNRPLHFEDGSEIDLTENEYADFRLNKHHIFPNAYLRGLDYSKKERK
SIMDITFIPAELNRRLSDTSAKEYFGRLANDVNEFERIMDSHLIPHDEDSGIWDNDYDTFQEQRAELVYSEFMELIGEYS
ALESDLRNDPQSAVKETEVLVRDFIDRELALASDGGTFWGEVPNDVNSNVQRRISEEQDSNPEFTVDSDRDKLDFCNVMD
YAKIINARWDVFGDYLPSKSAVQTRFEDFAEFRNALAHHREIDRFTEMDGQVAIEWINSCITEEY
>Mature_465_residues
MVNANIWSRDFNLRSRIDEDIFEHLDQIGFGEIDRGTVTQTLALNIDGTCSTDAQKNLDPDDVRENWEDTKEAMISAIGY
LRKQHGVKRSEFIPYEGMIPVLAYYMYETDRRNVDPDHQEQIDRWFWRVALSGRYSSSAQTRMTEDSKLVDRIIAGEDVE
INFTPQISTERLKTTNIKRSTSGLRNAFLCLLARNRPLHFEDGSEIDLTENEYADFRLNKHHIFPNAYLRGLDYSKKERK
SIMDITFIPAELNRRLSDTSAKEYFGRLANDVNEFERIMDSHLIPHDEDSGIWDNDYDTFQEQRAELVYSEFMELIGEYS
ALESDLRNDPQSAVKETEVLVRDFIDRELALASDGGTFWGEVPNDVNSNVQRRISEEQDSNPEFTVDSDRDKLDFCNVMD
YAKIINARWDVFGDYLPSKSAVQTRFEDFAEFRNALAHHREIDRFTEMDGQVAIEWINSCITEEY

Specific function: Unknown

COG id: COG3472

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54197; Mature: 54197

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNANIWSRDFNLRSRIDEDIFEHLDQIGFGEIDRGTVTQTLALNIDGTCSTDAQKNLDP
CCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCH
DDVRENWEDTKEAMISAIGYLRKQHGVKRSEFIPYEGMIPVLAYYMYETDRRNVDPDHQE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHH
QIDRWFWRVALSGRYSSSAQTRMTEDSKLVDRIIAGEDVEINFTPQISTERLKTTNIKRS
HHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHH
TSGLRNAFLCLLARNRPLHFEDGSEIDLTENEYADFRLNKHHIFPNAYLRGLDYSKKERK
HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEECCCCEECCHHHHHCCCCCHHHHH
SIMDITFIPAELNRRLSDTSAKEYFGRLANDVNEFERIMDSHLIPHDEDSGIWDNDYDTF
HHHHEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
QEQRAELVYSEFMELIGEYSALESDLRNDPQSAVKETEVLVRDFIDRELALASDGGTFWG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
EVPNDVNSNVQRRISEEQDSNPEFTVDSDRDKLDFCNVMDYAKIINARWDVFGDYLPSKS
CCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AVQTRFEDFAEFRNALAHHREIDRFTEMDGQVAIEWINSCITEEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVNANIWSRDFNLRSRIDEDIFEHLDQIGFGEIDRGTVTQTLALNIDGTCSTDAQKNLDP
CCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCH
DDVRENWEDTKEAMISAIGYLRKQHGVKRSEFIPYEGMIPVLAYYMYETDRRNVDPDHQE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHH
QIDRWFWRVALSGRYSSSAQTRMTEDSKLVDRIIAGEDVEINFTPQISTERLKTTNIKRS
HHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHH
TSGLRNAFLCLLARNRPLHFEDGSEIDLTENEYADFRLNKHHIFPNAYLRGLDYSKKERK
HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEECCCCEECCHHHHHCCCCCHHHHH
SIMDITFIPAELNRRLSDTSAKEYFGRLANDVNEFERIMDSHLIPHDEDSGIWDNDYDTF
HHHHEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
QEQRAELVYSEFMELIGEYSALESDLRNDPQSAVKETEVLVRDFIDRELALASDGGTFWG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
EVPNDVNSNVQRRISEEQDSNPEFTVDSDRDKLDFCNVMDYAKIINARWDVFGDYLPSKS
CCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AVQTRFEDFAEFRNALAHHREIDRFTEMDGQVAIEWINSCITEEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA