Definition Halobacterium sp. NRC-1 chromosome, complete genome.
Accession NC_002607
Length 2,014,239

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The map label for this gene is rpoC

Identifier: 15791387

GI number:

Start: 1994558

End: 1995751

Strand: Reverse

Name: rpoC

Synonym: VNG2662G

Alternate gene names: NA

Gene position: NA

Preceding gene: 16554525

Following gene: 15791386

Centisome position: NA

GC content: NA

Gene sequence:

>1194_bases
ATGACTGAGTTCGACGTGACGGACGGCGTCCACGACGTGATCGAGGACACCGAGTTGCCACGGCGGCTGAAAGACGAGGT
GCTCGCGACCGCCGAGGAGCGCGGGGTCACGAAGTCCCAGGCGAACGAGATCGCCACCGCGGTTGAGGCCCAATATTTGG
ACACGCGCGTCGACCCGCTCGACCCAGTGGGGACGGTGAGCGCACAGTCCATCGGGGAGCCGGGGACGCAGATGACCATG
AACACGTTCCACTACGCGGGCGTCGCGGAGATGGACGTGACACAGGGGCTGCCGCGGCTCATCGAGCTCGTGGACGCCCG
GAAGACGCCGGACACGCCGGTGATGGAGGTGTACTTGGAGGACGAGTACGCCGAGGAGCGCGAGCGCGCCCACGAGGTCG
TCTGGAAGATCGAGGCCACGAAGATCCTCGCGCTGGGCGACATCTCCACGAACGTCGCGGACATGGTCGTCCGCATCGAC
CTCAACGAGGACACGCTCCAGGAGCGGTGGCCGCGGGTTGACTCCACGACGCAGATCGCGGGGGAGGTCGCGGAGACGAT
CGAGGGGAACCTCGGTGTGACGGTGACCCAGGACGGCACGATCCTGGAGTTCGGACCGAGCGAGCCGTCGTACCGGGAGC
TCCTGCAGCTGGTCGAGCAGCTCCGGGACATCGTGTTCAAGGGCATCGAGGAGGTGTCCCGGGTCGTGATCCGGCGCGAA
GAAACCGAGCGCGGCGAGGAGTTCGTCCTCTACACCGAGGGGTCGGCGTTCAAGAAGGCGCTCAAGATCGAGGGCGTCGA
CGCCACGCGCACGTCGTGTAACAACATCCACGAGGTGCACAAGACCCTCGGCATCGAGGCCGCTCGGGAGGCGATCATCA
ACGAGACGATGACCACCCTCGAAGAGCAGGGCCTCGACGACGTGAACATCCGCCACCTGATGTTGGTCGCCGACATCATG
ACCAACGACGGCACCATCGAGTCGATCGGCCGTCACGGCATCTCGGGGAACAAGAACTCCGTGCTCGCGCGGGCCGCCTT
CGAGGTGACGGTGAACCACCTCCTGGACGCGGCGATCCACGGCGAGAGCGACGACCTCGACGGCGTCATCGAGAACGTGA
TCGTCGGGAAGCCGGTTCGGCTCGGAACTGGTGACGTTGACCTCCGGATGGGCGCGACACAGACGTCGGACTGA

Upstream 100 bases:

>100_bases
TCGGAGTTCGACAGCGACACCCAGAAGGCCGAGTTCCTGGAGGTCGAGGAGCCGCCGACGAACCTCTCCGAGCACGGCGC
CGCCTGGGAGGTGGAATCGG

Downstream 100 bases:

>100_bases
TGACCATCCGGCTCTCAGATGAGGCGCGCCAGCTCATCGCCGTCTTCGAGACGGAGACCGACGCGACGGCCGTCGATTGC
CTGCCCGACGACGACCGGGT

Product: DNA-directed RNA polymerase subunit A''

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>397_residues
MTEFDVTDGVHDVIEDTELPRRLKDEVLATAEERGVTKSQANEIATAVEAQYLDTRVDPLDPVGTVSAQSIGEPGTQMTM
NTFHYAGVAEMDVTQGLPRLIELVDARKTPDTPVMEVYLEDEYAEERERAHEVVWKIEATKILALGDISTNVADMVVRID
LNEDTLQERWPRVDSTTQIAGEVAETIEGNLGVTVTQDGTILEFGPSEPSYRELLQLVEQLRDIVFKGIEEVSRVVIRRE
ETERGEEFVLYTEGSAFKKALKIEGVDATRTSCNNIHEVHKTLGIEAAREAIINETMTTLEEQGLDDVNIRHLMLVADIM
TNDGTIESIGRHGISGNKNSVLARAAFEVTVNHLLDAAIHGESDDLDGVIENVIVGKPVRLGTGDVDLRMGATQTSD

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA