| Definition | Halobacterium sp. NRC-1 chromosome, complete genome. |
|---|---|
| Accession | NC_002607 |
| Length | 2,014,239 |
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The map label for this gene is gspE1
Identifier: 15789521
GI number:
Start: 184985
End: 186631
Strand: Reverse
Name: gspE1
Synonym: VNG0218G
Alternate gene names: NA
Gene position: NA
Preceding gene: 15789525
Following gene: 15789519
Centisome position: NA
GC content: NA
Gene sequence:
>1647_bases ATGGCCCCCCTCGTTCCCCCGCCAACGCCGCCCGGCAGCGACGCGGCGTGGTACGCCCCGGCGGTCACCGCCCAGTACAC CGTCCATCCCGGCATTGTGGCCACCGTCACCGCGCGCGACGGGGCACGCCCGACCTACGAGCTGCGACGGCCGCAGCTCT CCGCGCGGGACGCAGACGCGCTGGCGGACGTGTGCGAGCAGTTCGCCGACGCGACGCTCCCACCGCCGCTGACGCGCGCC GACGCCCGGGACCGCCTGGCGGCCGGGTTCGAGGCCAAACACCGGCGGGTGATCGCGGCGCTCACCGACGCCACGCCGGC CGCACGCCGCCGCATCACGGTGCACGCGCTGTGCGAGGCGCGCTGCCTGGGGGACCTGACCGGGGTGGCTGCCGACGACC GTGTGACCGCGGCTGTCGCCGACGACGAGACGGTGGTCGTGCACACCGACGCTCAGCCGCCCGCTACCACCGGGTTGCCC GCGAACACGCCGGCCCACGACCGGCTTCGTGCCACACGGATCGCGGCGTACACGGTGCCGTTCCGCGGGTTCGACGTGCC CGTGCGGATCTACCGGACGCCCGGGGACGACGCGGACGCGTTCACCACGACGTACGCCGTCCGGGAGCCCGACCGGCTGC CCGGCGACGACGCCCGCATCGCCGCCTGCAAGGACCGCATCTGGACCAACGGCGTCGCGACGGGCGACAGCGACGCCGGC GACGACCACGCCGCGGCGACCGCTGACCGCGCCCGCAGTCTGCTTGCGCGCCGCCACACGGCGCCGAAAACGCGGCACTG GTGTGGCGCCATCGCCGACCGGGTCCGGGAAGCGGTGGCCGACCGCGGCCCCGCGGTGCCGCCGGTCGGCGACGACCACG TCGCGGATCTGGCGTACTACGTGGTGCGTGATCTCGTCGGCGACGCCGAGCTCACGATCCCGATCCGCGACCCCAACCTC GAAGACGTGGAGGCGAACCGGGTGGGCGAGCGCGTGAAAGTGGTGGCCCGCGACCGCGTGCACGCGGCCGACGACCGCAT CCCCACGAACCTCGTGCTCGACGACGAACAGCGGTTCGTGGACCTCGTGACGGGGCTGGCCGCCCAGGACGGCGTGGAGC TGAACGCCGCCACGCCGGCGGCGAAGGTGAACCTCGAACCGGACGGGGTCGCCGACGACGTGACCATCCGGTGTGCGGTC GCGCTCCCCGCGATCAGCGAGGGCGGCCCCCACGTCTCCATCCGGAAGCAGGCCGCCGACGCGCTCACGCCGGTCGACCT GCTCCGGCAGGGCAGCCTCACGGCGGGCATCGTGGCGCTGCTGTGGCTGGCGTACGAACACCACCGCGTGGTGCTGTTCT CCGGCCCGACGGGCGTGGGGAAGACCACGCTGATGAACGCCCACATGCCGTTCGTGCCGTTCGACGACCGCCCGGTGAGC ATCGACGAGGGCAGCCGGGAGGTCCGGCTGCCCCACGAGACCGGCGTCTCGCTGAGCACCCGCGAGCACGAACAGGCGTT CAAGCGCGTGTCGATGGCCGACCTGATGACCGCGACCAACTACCTCAACCCGGACATCGAGGTGATCGCGGAGATCAACA CGCGGGCCAGCTTCGAGAGCTTCGCGCAGATCCTCAACACCGGCTAA
Upstream 100 bases:
>100_bases TGTTGCGAACAGGCATCGCGGTACGCGATAGCACGATACTGGCGTCGTGGAGTGGCCTCCGCCCCCAGGTTTAAATCCAG GAGCGAGGCAGCCGGGCGTA
Downstream 100 bases:
>100_bases AGTCAGAATCTACTAGATCTTACTCGCCGTCAGAATCAGGTTCACCGTGCATTTCAATGTCTTTTTTTACTCTCTCAAGT GCTTCTTGTTCCCGTTTTTT
Product: type II secretion system protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>548_residues MAPLVPPPTPPGSDAAWYAPAVTAQYTVHPGIVATVTARDGARPTYELRRPQLSARDADALADVCEQFADATLPPPLTRA DARDRLAAGFEAKHRRVIAALTDATPAARRRITVHALCEARCLGDLTGVAADDRVTAAVADDETVVVHTDAQPPATTGLP ANTPAHDRLRATRIAAYTVPFRGFDVPVRIYRTPGDDADAFTTTYAVREPDRLPGDDARIAACKDRIWTNGVATGDSDAG DDHAAATADRARSLLARRHTAPKTRHWCGAIADRVREAVADRGPAVPPVGDDHVADLAYYVVRDLVGDAELTIPIRDPNL EDVEANRVGERVKVVARDRVHAADDRIPTNLVLDDEQRFVDLVTGLAAQDGVELNAATPAAKVNLEPDGVADDVTIRCAV ALPAISEGGPHVSIRKQAADALTPVDLLRQGSLTAGIVALLWLAYEHHRVVLFSGPTGVGKTTLMNAHMPFVPFDDRPVS IDEGSREVRLPHETGVSLSTREHEQAFKRVSMADLMTATNYLNPDIEVIAEINTRASFESFAQILNTG
Sequences:
NA
Specific function: NA
COG id: COG0630
COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA