Definition Halobacterium sp. NRC-1 chromosome, complete genome.
Accession NC_002607
Length 2,014,239

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The map label for this gene is rpa

Identifier: 15789450

GI number:

Start: 110769

End: 112193

Strand: Direct

Name: rpa

Synonym: VNG0133G

Alternate gene names: NA

Gene position: NA

Preceding gene: 15789448

Following gene: 15789451

Centisome position: NA

GC content: NA

Gene sequence:

>1425_bases
ATGGGCGCGATTGAGGACGTGTACGCTGACCTCGACACCGACGTGTCTATCGAGGAGTTCCGGGAGGCCGTCGAGTCGAA
GGTCGAACAGATGGGGGGGCTCGCCGACGAGGAGACGGCGGCGATGCTCATCGCCCACGAGATCGACGACGGCGAGGTGA
ACGGCGTCGCGGACATCGACTCCGAGATGGACGAGGTGAAGTTCATCGCGAAAGTCACCCGCGTGGGTGACGTCCGCACG
TTCGACCGCGAGGACGCCGACGACGACGATGCGGCCGCCGAGGGGCGGGTGGTGAACGTCACGGTGGCCGACGAAACGGA
CGACGTCCGGGTCTCGCTGTGGGACGAACAGGCCACCGCGGCCGCCGACGACCTCGCCCCCGGGGACGTGCTCCGCATCA
AGGGGCGGCCGACGGACGGCTACAACGGCCTGGAGGTCAGCGCCGACGAGGTCGAACTCGACGCCGACGAGCAGATCGAC
GTCCAGATCCAGGACGAATACGACGCCGCCGACCTCTCGTTGGGGGTTTCGGACGTGACCCTCGTCGGGGAGGTCCTGGA
CACCGAGGCCGTCCGGACGTTCGACCGTGACGACGGCAGCGAGGGTCGTGTGTCGAATCTCGTGGTGGGCGACGAGACCG
GCCGAGTGCGAGTGACCCTGTGGGACGACCAGGCCGACACCGCGACGGATCTCGACGCCGGGGCCGTCGTCGAGATCGTG
GACGGATACGTCCGCGAGCGGGAGGGCAGCCTCGAACTCCACGTCGGGGACACCGGCGCGGTCACGCCGGTCCCGGACGC
CGACGTGTCGTTCGTTCCGGACACCACGTCCATCGACAGCCTCGAACAGGACGACACCGCGGACATCGCGGGCGTCGTTC
GGTCGGTCGACCCCACGCGCACGTTCGACCGCGACGACGGCAGCGAGGGCCAGGTACGCAACGTCCGCCTGCAGGACGAC
ACCGGCGACATTCGGGTTGCGTTGTGGGGCGAGAAGGCGGATCTGGACATCGGCCCGGGTGACGAAGTGGCGGCCCTCGA
CGTGGAGATCCAGGACGGCTGGCAGGACGACATCGAGGCGTCGGCCGGCTGGCAGGCGTCGGTGATCCCGCTGTCGGACA
GCACCCAGGACGACGCCGCCGCCGGCAGCGACGGCCCCGACCGCGGGCTGGCGGCGTTCGGTGCCGACAGCGACGACGAG
CCCGCCGCCACCGACGACGCGGCCGACACACAGACTCCACACAGCGACACGCCCGTGGAGTTCACCGGCGTCGTCGTGCA
GGCCCAGGACCCGCTGATTCTGGACGACGGCGAGGAGACGATGAGTGTCACCACCGACGCCGACGTGACTCTCGGCCAGG
AGGTCACCGTCCGCGGCTCGCTCGACGACGGCCGGCTACACGCCGACGACGTCACGGAGTCGTGA

Upstream 100 bases:

>100_bases
CGATGACAGTCGTTTTCATGGTGGTGGGCGAGCGCACGCGCTGCACTCATCGAGACACCGTAAACGCTTATGGTGGCCGT
CGCCTTGGCCTGAACCGACA

Downstream 100 bases:

>100_bases
CTCGCGTCGAGGTAACGGAAACAATTAAGCGTGCGAGCGCCACGATGTGACGCATGAGCGTCGAACTCCCGTTCGCCCCG
GTGGATTCACTCATCCGGGG

Product: replication factor A

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>474_residues
MGAIEDVYADLDTDVSIEEFREAVESKVEQMGGLADEETAAMLIAHEIDDGEVNGVADIDSEMDEVKFIAKVTRVGDVRT
FDREDADDDDAAAEGRVVNVTVADETDDVRVSLWDEQATAAADDLAPGDVLRIKGRPTDGYNGLEVSADEVELDADEQID
VQIQDEYDAADLSLGVSDVTLVGEVLDTEAVRTFDRDDGSEGRVSNLVVGDETGRVRVTLWDDQADTATDLDAGAVVEIV
DGYVREREGSLELHVGDTGAVTPVPDADVSFVPDTTSIDSLEQDDTADIAGVVRSVDPTRTFDRDDGSEGQVRNVRLQDD
TGDIRVALWGEKADLDIGPGDEVAALDVEIQDGWQDDIEASAGWQASVIPLSDSTQDDAAAGSDGPDRGLAAFGADSDDE
PAATDDAADTQTPHSDTPVEFTGVVVQAQDPLILDDGEETMSVTTDADVTLGQEVTVRGSLDDGRLHADDVTES

Sequences:
NA

Specific function: NA

COG id: COG1599

COG function: function code L; Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA