Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836553

GI number: 15836553

Start: 1170619

End: 1172079

Strand: Reverse

Name: Not Available

Synonym: CPj1022

Alternate gene names: NA

Gene position: 1172079-1170619 (Counterclockwise)

Preceding gene: 15836555

Following gene: 15836552

Centisome position: 95.56

GC content: 41.82

Gene sequence:

>1461_bases
ATGAATATGCCTGTTCCTTCTGCAGTTCCCTCTGCAAATATAACTCTAAAAGAAGACAGCTCAACAGTTTCCACAGCCTC
TGGAATATTAAAGACTGCAACAGGTGAAGTCTTAGTCTCTTGTACAGCGCTAGAAGGAAGCTCTTCTACAGATGCTTTAA
TTAGCTTAGCTTTAGGACAAATCATTCTTGCGACCCAACAAGAACTGCTCTTACAAAGCACAAATGTTCATCAACTCCTC
TTCCTCCCTCCTGAAGTTGTAGAATTAGAAATCCAAGTTGTTGACTTGCTAGTGCAATTGGAACATGCAGAGACAATCAC
AAGTGAACCACAAGAAACACAAACGCAAAGTAGGAGTGAGCAGACCCTCCCTCAACAAAGCAGCAGTAAACAATCTGCTC
TCTCCCCACGCTCCTTAAAACCTGAAATTTCTGATTCTAAACAACAGCAAGCTCTTCAAACACCAAAAGGCTCTGCTGTA
AGAAAACACAGCGAAGCACCGTCACCTGAGACACAAGCTCGCGCTTCCTTATCTCAGGCAAGCTCAAGTTCTCAGAGATC
CTTACCTCCGCAAGAAAGTGCGCCAGAAAGAACACTATTAGAACAACAAAAAGCAAGCTCCTTCTCTCCTCTATCCCAGT
TCTCTGCAGAGAAACAAAAAGAGGCCCTGACGACCTCAAAATCTCATGAACTCTATAAAGAACGCGATCAAGATCGCCAA
CAAAGAGAGCAGCACGACAGAAAGCACGATCAGGAAGAAGACGCTGAATCTAAAAAGAAAAAGAAGAAACGTGGTCTCGG
TGTAGAGGCAGTCGCTGAGGAACCCGGAGAAAATCTAGATATTGCCGCTTTAATCTTCTCAGATCAAATGCGACCTCCTG
CTGAAGAAACTTCTAAAAAAGAAACGACATTCAAAAAGAAGCTACCTTCTCCAATGTCTGTGTTTAGCAGATTCATCCCT
AGTAAGAATCCGTTATCTGTAGGCTCTTCAATACACGGGCCTATACAAACTCCAAAAGTAGAAAATGTGTTCTTAAGGTT
CATGAAGCTCATGGCAAGAATCTTAGGCCAAGCCGAAGCCGAAGCTAATGAACTCTACATGCGAGTCAAACAACGTACCG
ATGATGTAGACACACTCACAGTCCTTATCTCTAAGATCAATAATGAAAAGAAAGACATTGATTGGAGTGAAAATGAAGAG
ATGAAAGCTCTTTTAAATCGAGCTAAAGAGATTGGAGTCACTATAGACAAAGAAAAATATACTTGGACAGAAGAGGAAAA
AAGACTTCTAAAAGAGAATGTCCAAATGCGCAAAGAGAATATGGAGAAAATCACTCAAATGGAAAGGACGGACATGCAAA
GGCACCTCCAAGAGATTTCTCAATGTCATCAAGCGCGCTCTAATGTATTGAAGTTATTGAAAGAACTTATGGACACCTTC
ATTTACAACCTACGCCCCTAA

Upstream 100 bases:

>100_bases
TTATTTTCTCTTTCCCTCTAAACCGCTTACAATCAAACTTGCAGGAAAATGATGTTTTAGCTAATTTTCCTTTTTTTTCT
ACGCACTCAAATTACAAATC

Downstream 100 bases:

>100_bases
TGTCACATTTAAATTATTTACTAGAAAAAATCGCTGCATCTTCCAAGGAAGACTTCCCTTTCCCAGATGATTTGGAAAGC
TATTTGGAAGGATATGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQIILATQQELLLQSTNVHQLL
FLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSEQTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKGSAV
RKHSEAPSPETQARASLSQASSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ
QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKKETTFKKKLPSPMSVFSRFIP
SKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEAEANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEE
MKALLNRAKEIGVTIDKEKYTWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF
IYNLRP

Sequences:

>Translated_486_residues
MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQIILATQQELLLQSTNVHQLL
FLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSEQTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKGSAV
RKHSEAPSPETQARASLSQASSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ
QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKKETTFKKKLPSPMSVFSRFIP
SKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEAEANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEE
MKALLNRAKEIGVTIDKEKYTWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF
IYNLRP
>Mature_486_residues
MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQIILATQQELLLQSTNVHQLL
FLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSEQTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKGSAV
RKHSEAPSPETQARASLSQASSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ
QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKKETTFKKKLPSPMSVFSRFIP
SKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEAEANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEE
MKALLNRAKEIGVTIDKEKYTWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF
IYNLRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54637; Mature: 54637

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQ
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH
IILATQQELLLQSTNVHQLLFLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSE
HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKGSAVRKHSEAPSPETQARASLSQA
HHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHH
SSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ
CCCHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKK
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHH
ETTFKKKLPSPMSVFSRFIPSKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEA
HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEEMKALLNRAKEIGVTIDKEKY
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCC
TWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYNLRP
HHHCCC
>Mature Secondary Structure
MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQ
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH
IILATQQELLLQSTNVHQLLFLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSE
HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKGSAVRKHSEAPSPETQARASLSQA
HHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHH
SSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ
CCCHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKK
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHH
ETTFKKKLPSPMSVFSRFIPSKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEA
HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEEMKALLNRAKEIGVTIDKEKY
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCC
TWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYNLRP
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA