| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836537
GI number: 15836537
Start: 1152393
End: 1152878
Strand: Reverse
Name: Not Available
Synonym: CPj1006
Alternate gene names: NA
Gene position: 1152878-1152393 (Counterclockwise)
Preceding gene: 15836540
Following gene: 15836536
Centisome position: 93.99
GC content: 37.04
Gene sequence:
>486_bases ATGTCTATAACCACCTTAGGGACTCTTCCCACAGTTAATACTATAAACAGTTCTCGTCCTCCCCTTGAGCCTCTAAATAC ACCTAAAATAGGTGCTGTGCTTTTTAGCATTTACGAGCTTCTTTTACAAGCAATTGAAATTCGACAACAAACAGTTCTGA CTCAATCACAACAATTAAACGACAATACTAATATTCAACAACAATTAAACCAAGAAACTAATCAAATCAAGTATGCAATA GTAAGTGCTGGAGCAAAAGAAGACGAGATCACTAGAGTACAAAATCAGAACCAAAACTACTCAGCACAAAGATCTAATAT CCAAGACGAACTCGTAACAACAAGACAAAACGGTCAAATTATCCTCTCACACGCCTCTACAAACATTAACATCATCCAAC AGCAATCCTCACAAGACTCCTCATTTATCAAAACAACAAACTCCATAGGAAGCACCGTAAACCAACTGAATAAACCCCTA GGATAA
Upstream 100 bases:
>100_bases ACTTAATAACAACTAATAAAGAAAAATCATAAAAATTTTATTTTAATAAACGTTTTTCTTCTTGTTAGAATAAAACTAAA CAAAAGTGAATTTTTTTATT
Downstream 100 bases:
>100_bases GGAATTAAAACCATCCGTAAACATTTTAAAATCGAAAACCAGTTAGGTTGAATATGTGGATCATAGACCCTCTATCAGCA AAAAAACCTCTACAAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSITTLGTLPTVNTINSSRPPLEPLNTPKIGAVLFSIYELLLQAIEIRQQTVLTQSQQLNDNTNIQQQLNQETNQIKYAI VSAGAKEDEITRVQNQNQNYSAQRSNIQDELVTTRQNGQIILSHASTNINIIQQQSSQDSSFIKTTNSIGSTVNQLNKPL G
Sequences:
>Translated_161_residues MSITTLGTLPTVNTINSSRPPLEPLNTPKIGAVLFSIYELLLQAIEIRQQTVLTQSQQLNDNTNIQQQLNQETNQIKYAI VSAGAKEDEITRVQNQNQNYSAQRSNIQDELVTTRQNGQIILSHASTNINIIQQQSSQDSSFIKTTNSIGSTVNQLNKPL G >Mature_160_residues SITTLGTLPTVNTINSSRPPLEPLNTPKIGAVLFSIYELLLQAIEIRQQTVLTQSQQLNDNTNIQQQLNQETNQIKYAIV SAGAKEDEITRVQNQNQNYSAQRSNIQDELVTTRQNGQIILSHASTNINIIQQQSSQDSSFIKTTNSIGSTVNQLNKPLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17820; Mature: 17689
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITTLGTLPTVNTINSSRPPLEPLNTPKIGAVLFSIYELLLQAIEIRQQTVLTQSQQLN CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DNTNIQQQLNQETNQIKYAIVSAGAKEDEITRVQNQNQNYSAQRSNIQDELVTTRQNGQI CCCCHHHHHHHHHHHHEEHEEECCCCHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCCCEE ILSHASTNINIIQQQSSQDSSFIKTTNSIGSTVNQLNKPLG EEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SITTLGTLPTVNTINSSRPPLEPLNTPKIGAVLFSIYELLLQAIEIRQQTVLTQSQQLN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DNTNIQQQLNQETNQIKYAIVSAGAKEDEITRVQNQNQNYSAQRSNIQDELVTTRQNGQI CCCCHHHHHHHHHHHHEEHEEECCCCHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCCCEE ILSHASTNINIIQQQSSQDSSFIKTTNSIGSTVNQLNKPLG EEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA