| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836508
GI number: 15836508
Start: 1117784
End: 1118890
Strand: Direct
Name: Not Available
Synonym: CPj0976
Alternate gene names: NA
Gene position: 1117784-1118890 (Clockwise)
Preceding gene: 15836507
Following gene: 15836509
Centisome position: 91.13
GC content: 40.29
Gene sequence:
>1107_bases TTGATGCTTGTCTATTGTTTTGATCCCTCGGTACCAACTTCACCAGAACACCGCCTGATGGCGGCATTAGACCGTTGGTT TTTCTTAGGAGGACATCGTGTAAGAATTCTCACGCTTGAGGGTAATCACTATCGGGCTTTTCAAGAAAATATGTCTATCT CAACAGTAGAGAAGATATTGAAACTAATTTCCTATCTACTCATCCCTATTGTCCTTATTGCTTTGCTAATCCGTTGTTTC TTACACTCTAGGTTTAAATGTAATTGGAAATGCGATTCTCTAAGTGACGCAAGAGTCCCCCACGACGTTCAACCTTTCAA TGATTTCCAACTTTTCAATAATCAGGAGAGGCTAAATATATGGAAAAATCGGAGATATGTCTCTGGAATAGATGTGCTTA TGGTGCCGGTCGATTATCTCAGATCTCAGTTTCCCGGTTTTAAGGAGATTCCAGAAGCTATCCGTTGCGAAAACTATGTA AGTGATGGTCAGTTTTCTGAAGAAAGTAAAACAAGCTATCTTAGAGCGATGCTGACCGACATTGTTGGGTATATCTTGTC ATTAGATGAGACCTATTGGACGAATGTGATCCTCAAGATCCGTGCGATGTGCATCACCTTCGAAAGTTTCCCTGGAAAAG AAGCAGACCCTAACTATTCCCCTCGCGTAACTCACCACTATTTTGATGAATCTTGGAAGGCACTTGCGCGACATGTATTA GGAGAAGGTAACATGGTGAATAGACTAGATGAGGCGCTAATTCGTACAGAGAAGCCGGGCAAAGAAGGGGAATGTATTAC GAAACAGTTTTTAAAAGATTACTGTAAAAAGCATCTCGAAGTTATGAGTTGTCCAGATTTCATTGAATCTCTGGTAGATG AAAAAATCCGAGAGTTTCGTTGTCCAAGTATTTTAAACTCAGCAGTATGTGATGTAATAGATCGCAAATGCCAAGAACAT TTGTTAAAGGCAATAATAAACGAAGCAAACCGCAGGCTCCCTGGGATGAAAAATAGCTCATTCACTATGCGTGGTAACCA AGTTTTATTTTATACCATCTTTTCTCCACCAAAATTGCCACCTGCTGCGAGTTCCGTATATTTTTAA
Upstream 100 bases:
>100_bases TTTAAAGTATATAAATAATTTATAATTATAAAAATAATTTACTTTTTAATAATTAAAATGTAAACTGTGTGCACTTTAAT AATAATTATAATTATAGATT
Downstream 100 bases:
>100_bases AGAAAGGAGATCTCTTGGTCTCCTAGTCCTGCTATAAGGTCTTGATATACATCTTTTTGGAGTAATTTCATTTTTTATAT TATTTTATTAAAATCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MMLVYCFDPSVPTSPEHRLMAALDRWFFLGGHRVRILTLEGNHYRAFQENMSISTVEKILKLISYLLIPIVLIALLIRCF LHSRFKCNWKCDSLSDARVPHDVQPFNDFQLFNNQERLNIWKNRRYVSGIDVLMVPVDYLRSQFPGFKEIPEAIRCENYV SDGQFSEESKTSYLRAMLTDIVGYILSLDETYWTNVILKIRAMCITFESFPGKEADPNYSPRVTHHYFDESWKALARHVL GEGNMVNRLDEALIRTEKPGKEGECITKQFLKDYCKKHLEVMSCPDFIESLVDEKIREFRCPSILNSAVCDVIDRKCQEH LLKAIINEANRRLPGMKNSSFTMRGNQVLFYTIFSPPKLPPAASSVYF
Sequences:
>Translated_368_residues MMLVYCFDPSVPTSPEHRLMAALDRWFFLGGHRVRILTLEGNHYRAFQENMSISTVEKILKLISYLLIPIVLIALLIRCF LHSRFKCNWKCDSLSDARVPHDVQPFNDFQLFNNQERLNIWKNRRYVSGIDVLMVPVDYLRSQFPGFKEIPEAIRCENYV SDGQFSEESKTSYLRAMLTDIVGYILSLDETYWTNVILKIRAMCITFESFPGKEADPNYSPRVTHHYFDESWKALARHVL GEGNMVNRLDEALIRTEKPGKEGECITKQFLKDYCKKHLEVMSCPDFIESLVDEKIREFRCPSILNSAVCDVIDRKCQEH LLKAIINEANRRLPGMKNSSFTMRGNQVLFYTIFSPPKLPPAASSVYF >Mature_368_residues MMLVYCFDPSVPTSPEHRLMAALDRWFFLGGHRVRILTLEGNHYRAFQENMSISTVEKILKLISYLLIPIVLIALLIRCF LHSRFKCNWKCDSLSDARVPHDVQPFNDFQLFNNQERLNIWKNRRYVSGIDVLMVPVDYLRSQFPGFKEIPEAIRCENYV SDGQFSEESKTSYLRAMLTDIVGYILSLDETYWTNVILKIRAMCITFESFPGKEADPNYSPRVTHHYFDESWKALARHVL GEGNMVNRLDEALIRTEKPGKEGECITKQFLKDYCKKHLEVMSCPDFIESLVDEKIREFRCPSILNSAVCDVIDRKCQEH LLKAIINEANRRLPGMKNSSFTMRGNQVLFYTIFSPPKLPPAASSVYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42766; Mature: 42766
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLVYCFDPSVPTSPEHRLMAALDRWFFLGGHRVRILTLEGNHYRAFQENMSISTVEKIL CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEHHHHCCCHHHHHHHH KLISYLLIPIVLIALLIRCFLHSRFKCNWKCDSLSDARVPHDVQPFNDFQLFNNQERLNI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHH WKNRRYVSGIDVLMVPVDYLRSQFPGFKEIPEAIRCENYVSDGQFSEESKTSYLRAMLTD HHCCCCCCCCHHEEECHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH IVGYILSLDETYWTNVILKIRAMCITFESFPGKEADPNYSPRVTHHYFDESWKALARHVL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GEGNMVNRLDEALIRTEKPGKEGECITKQFLKDYCKKHLEVMSCPDFIESLVDEKIREFR CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC CPSILNSAVCDVIDRKCQEHLLKAIINEANRRLPGMKNSSFTMRGNQVLFYTIFSPPKLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEEECCCCCC PAASSVYF CCCCCCCC >Mature Secondary Structure MMLVYCFDPSVPTSPEHRLMAALDRWFFLGGHRVRILTLEGNHYRAFQENMSISTVEKIL CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEHHHHCCCHHHHHHHH KLISYLLIPIVLIALLIRCFLHSRFKCNWKCDSLSDARVPHDVQPFNDFQLFNNQERLNI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHH WKNRRYVSGIDVLMVPVDYLRSQFPGFKEIPEAIRCENYVSDGQFSEESKTSYLRAMLTD HHCCCCCCCCHHEEECHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH IVGYILSLDETYWTNVILKIRAMCITFESFPGKEADPNYSPRVTHHYFDESWKALARHVL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GEGNMVNRLDEALIRTEKPGKEGECITKQFLKDYCKKHLEVMSCPDFIESLVDEKIREFR CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC CPSILNSAVCDVIDRKCQEHLLKAIINEANRRLPGMKNSSFTMRGNQVLFYTIFSPPKLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEEECCCCCC PAASSVYF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA