Click here to switch to the map view.

The map label for this gene is ybeB

Identifier: 15836448

GI number: 15836448

Start: 1045809

End: 1046168

Strand: Direct

Name: ybeB

Synonym: CPj0915

Alternate gene names: 15836448

Gene position: 1045809-1046168 (Clockwise)

Preceding gene: 15836447

Following gene: 15836449

Centisome position: 85.26

GC content: 35.56

Gene sequence:

>360_bases
ATGGATTCATTTTGTTTTGATCTATTGAAAGTAGCTGCTAAAGCTATTGACGACAAAAAAGGGAATAATCTGGTTGTTCT
AGATGTTAGAACAATTTCGGAATTTACCGATTATTTTGTTTTTGTTGAAGGTAGTGTGAATGTGCATGTTAAGGCTTTAG
CAAATACTATCGTAGAAGAGTTAAAAAAGCAGAAAGTTAGTCCTCTTCATGTGGAGGGGATAACGGATGGTAATTGGGTG
GTGATAGATTACGGATTTATCGTCGTCCATGTATTTGTCTCTGAAATTCGTGGAAAATATCGTTTAGAAGAGCTATGGAA
GGACGGATTTATTGTCACATCCAAGCTTTTAGCTTCTTAA

Upstream 100 bases:

>100_bases
CAAGAAAATGGCAAAAAAATATTACTGGAATATCGTTTAATTCCATTTAAAAAAAAGCTCGACCTTATCTTGGATAATCG
AGTATCCTAAAGCTGGTTTT

Downstream 100 bases:

>100_bases
TGGAGTAAGGGTCTACATGAGTAAAAAACGCGTAGTTGTTACAGGATTCGGTGTTGTATCTTGCCTCGGTAATGAAGTAG
ATACCTTTTACGATAATCTT

Product: iojap superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDSFCFDLLKVAAKAIDDKKGNNLVVLDVRTISEFTDYFVFVEGSVNVHVKALANTIVEELKKQKVSPLHVEGITDGNWV
VIDYGFIVVHVFVSEIRGKYRLEELWKDGFIVTSKLLAS

Sequences:

>Translated_119_residues
MDSFCFDLLKVAAKAIDDKKGNNLVVLDVRTISEFTDYFVFVEGSVNVHVKALANTIVEELKKQKVSPLHVEGITDGNWV
VIDYGFIVVHVFVSEIRGKYRLEELWKDGFIVTSKLLAS
>Mature_119_residues
MDSFCFDLLKVAAKAIDDKKGNNLVVLDVRTISEFTDYFVFVEGSVNVHVKALANTIVEELKKQKVSPLHVEGITDGNWV
VIDYGFIVVHVFVSEIRGKYRLEELWKDGFIVTSKLLAS

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=91, Percent_Identity=39.5604395604396, Blast_Score=79, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 13421; Mature: 13421

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSFCFDLLKVAAKAIDDKKGNNLVVLDVRTISEFTDYFVFVEGSVNVHVKALANTIVEE
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCEEEEEECCCCEEHHHHHHHHHHH
LKKQKVSPLHVEGITDGNWVVIDYGFIVVHVFVSEIRGKYRLEELWKDGFIVTSKLLAS
HHHCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCEEHHHHHCC
>Mature Secondary Structure
MDSFCFDLLKVAAKAIDDKKGNNLVVLDVRTISEFTDYFVFVEGSVNVHVKALANTIVEE
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCEEEEEECCCCEEHHHHHHHHHHH
LKKQKVSPLHVEGITDGNWVVIDYGFIVVHVFVSEIRGKYRLEELWKDGFIVTSKLLAS
HHHCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]