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The map label for this gene is ybcL

Identifier: 15836410

GI number: 15836410

Start: 994854

End: 995306

Strand: Direct

Name: ybcL

Synonym: CPj0877

Alternate gene names: 15836410

Gene position: 994854-995306 (Clockwise)

Preceding gene: 15836409

Following gene: 15836414

Centisome position: 81.11

GC content: 44.59

Gene sequence:

>453_bases
ATGCAATTATTGTCCCCAGCGTTTGCTTATGGCGCCCCAATTCCTAAGAAGTATACATGCCAAGGCGCAGGGATTTCCCC
TCCCTTGACTTTTGTAGACGTCCCCGGTGCAGCGCAAAGTCTTGCTTTGATTGTCGAAGACCCTGATGTTCCTAAAGAAA
TTCGTAGCGATGGCCTGTGGATCCACTGGATAGTCTATAACCTATCCACCACAATTACTAATCTTGCCGAAGGAGCTGAA
ATCTTCGCTGTGCAAGGATTAAATACTTCTGGAAAGCCTGTCTATGAAGGTCCCTGTCCTCCAGATAAACAGCACCGCTA
CTTCTTTACTCTATTTGCTCTTGACGTAGTTCTTCCAGAAGAAGAAAACGTCACCCGTGATCAGCTATATGAAGCAATGG
AATTCCATATTATAGAACAAGCAGAGTTAATGGGAACTTACGAGAAAAGTTAG

Upstream 100 bases:

>100_bases
AGATGTACTATCCACAAACCGCGATGTTGCTTTGCTTAAAGAACGCGAGTGCTCTGTTGCAGATCCTGTGCGTAATCTAG
ATGCTTAAAGGAGAAGAATC

Downstream 100 bases:

>100_bases
AATTTATTCCTCTTCAGGAATAAATTCCTCTCGCTTCTTCCTGTGTTTCCAATATAGCGGGCCATAGTGATAGCAAATTT
CTTGGCCCGCATATATCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MQLLSPAFAYGAPIPKKYTCQGAGISPPLTFVDVPGAAQSLALIVEDPDVPKEIRSDGLWIHWIVYNLSTTITNLAEGAE
IFAVQGLNTSGKPVYEGPCPPDKQHRYFFTLFALDVVLPEEENVTRDQLYEAMEFHIIEQAELMGTYEKS

Sequences:

>Translated_150_residues
MQLLSPAFAYGAPIPKKYTCQGAGISPPLTFVDVPGAAQSLALIVEDPDVPKEIRSDGLWIHWIVYNLSTTITNLAEGAE
IFAVQGLNTSGKPVYEGPCPPDKQHRYFFTLFALDVVLPEEENVTRDQLYEAMEFHIIEQAELMGTYEKS
>Mature_150_residues
MQLLSPAFAYGAPIPKKYTCQGAGISPPLTFVDVPGAAQSLALIVEDPDVPKEIRSDGLWIHWIVYNLSTTITNLAEGAE
IFAVQGLNTSGKPVYEGPCPPDKQHRYFFTLFALDVVLPEEENVTRDQLYEAMEFHIIEQAELMGTYEKS

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family

Homologues:

Organism=Escherichia coli, GI1786757, Length=142, Percent_Identity=33.8028169014084, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI1786990, Length=162, Percent_Identity=29.0123456790123, Blast_Score=66, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y877_CHLPN (Q9Z729)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   C72024
- PIR:   C86600
- RefSeq:   NP_225072.1
- RefSeq:   NP_300934.1
- RefSeq:   NP_445529.1
- RefSeq:   NP_877178.1
- ProteinModelPortal:   Q9Z729
- SMR:   Q9Z729
- PHCI-2DPAGE:   Q9Z729
- GeneID:   1467585
- GeneID:   895449
- GeneID:   919640
- GeneID:   963463
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0992
- KEGG:   cpj:CPj0877
- KEGG:   cpn:CPn0877
- KEGG:   cpt:CpB0906
- TIGR:   CP_0992
- HOGENOM:   HBG649023
- OMA:   IGYNGPC
- PhylomeDB:   Q9Z729
- ProtClustDB:   CLSK871569
- BioCyc:   CPNE115711:CP_0992-MONOMER
- BioCyc:   CPNE115713:CPN0877-MONOMER
- BioCyc:   CPNE138677:CPJ0877-MONOMER
- BioCyc:   CPNE182082:CPB0906-MONOMER
- InterPro:   IPR008914
- InterPro:   IPR005247
- Gene3D:   G3DSA:3.90.280.10
- TIGRFAMs:   TIGR00481

Pfam domain/function: PF01161 PBP; SSF49777 PEBP

EC number: NA

Molecular weight: Translated: 16633; Mature: 16633

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLSPAFAYGAPIPKKYTCQGAGISPPLTFVDVPGAAQSLALIVEDPDVPKEIRSDGLW
CCCCCCHHHHCCCCCCCEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHCCCCE
IHWIVYNLSTTITNLAEGAEIFAVQGLNTSGKPVYEGPCPPDKQHRYFFTLFALDVVLPE
EEEEEEEHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEEEEEEECCC
EENVTRDQLYEAMEFHIIEQAELMGTYEKS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQLLSPAFAYGAPIPKKYTCQGAGISPPLTFVDVPGAAQSLALIVEDPDVPKEIRSDGLW
CCCCCCHHHHCCCCCCCEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHCCCCE
IHWIVYNLSTTITNLAEGAEIFAVQGLNTSGKPVYEGPCPPDKQHRYFFTLFALDVVLPE
EEEEEEEHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEEEEEEECCC
EENVTRDQLYEAMEFHIIEQAELMGTYEKS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362