| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836360
GI number: 15836360
Start: 933752
End: 934585
Strand: Reverse
Name: Not Available
Synonym: CPj0827
Alternate gene names: NA
Gene position: 934585-933752 (Counterclockwise)
Preceding gene: 15836361
Following gene: 15836359
Centisome position: 76.2
GC content: 39.57
Gene sequence:
>834_bases GTGACTGCCAACACTTTTGGAACTCTAGACATCTTGATGAAGCACTCCAAGGAAGATGACCTCTCCAGGTTTCTTCCTAA AAATCTTCTTGTTGAATCTCCTCATCCCGAAGAAATCCCTTTAAAATCTTTATCTTTTACGATGAGTTGGCTACCTACAA TTCATCCTTCATGGATTACCATTGCCATGAAAGAGTTCCCTCCTGAAATCCAAGGTCAATTATTAGCGTGGTTGCCAGAG CCTTTAGTTCAAGAAATTCTACCCTTACTGCCTGGCATCTCTATAGCCCCACATCGCTGTGCACCTTTCGGAGCCTTCTA TCTTCTAGATATGCTAAGTAAAAAGATCCGTCCTTGTGGAATTACAGAAGAAATCTTTCTTCCTGCATCCTCAGCAAATG CTATACTTTACTATACAGGTCCTGTAAAGATCGCTTTAATCAACTGCCTAGGTCTTTATTCTATTGCTAAAGAGTTGAAG CACATTCTGGATAAGGTTGTGATTGAACGAGTGAAGAATGCTCTCTCCCCTACAGAGAAACTCTTTCTTACCTACTGCCA ATCTCATCCGATGAAACATTTAGAAACTACGAATTTTCTTTCTTCTTGGACTACTGATGCAGAATTACGACAGTTCGTTC ATAAGCAAGGGTTAGAGTTTTTAGGTAAAGCATTAACAAAAGAAAACGCTTCTTTTCTATGGTATTTTCTACGTAGGTTA GATGTCGGTCGAGCATATATCGTCGAGCAGACTTTAAAAACATGGTATGACCATCCCTATGTGGATTATTTTAAGTCCCG CCTAGAACAATGCATGAAAGTCTTAGTGAAATAA
Upstream 100 bases:
>100_bases ATGCAGATTCACAGGGGGAAAGCAAAAATGCGGAAACCAGTGATAAAGACTCTAGTGATAAAGATGCTCCAGAAGGAAGC AATGAAATTGAGGGTGCTTA
Downstream 100 bases:
>100_bases AAGCTTTATAAGTAAAGATTTAGCTTTATACAAAGTATAGAAAAATAACACGACAATAAAAGGAGCGGTGTTTTCTCTTC TGAGGTAAATCAGCCTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTANTFGTLDILMKHSKEDDLSRFLPKNLLVESPHPEEIPLKSLSFTMSWLPTIHPSWITIAMKEFPPEIQGQLLAWLPE PLVQEILPLLPGISIAPHRCAPFGAFYLLDMLSKKIRPCGITEEIFLPASSANAILYYTGPVKIALINCLGLYSIAKELK HILDKVVIERVKNALSPTEKLFLTYCQSHPMKHLETTNFLSSWTTDAELRQFVHKQGLEFLGKALTKENASFLWYFLRRL DVGRAYIVEQTLKTWYDHPYVDYFKSRLEQCMKVLVK
Sequences:
>Translated_277_residues MTANTFGTLDILMKHSKEDDLSRFLPKNLLVESPHPEEIPLKSLSFTMSWLPTIHPSWITIAMKEFPPEIQGQLLAWLPE PLVQEILPLLPGISIAPHRCAPFGAFYLLDMLSKKIRPCGITEEIFLPASSANAILYYTGPVKIALINCLGLYSIAKELK HILDKVVIERVKNALSPTEKLFLTYCQSHPMKHLETTNFLSSWTTDAELRQFVHKQGLEFLGKALTKENASFLWYFLRRL DVGRAYIVEQTLKTWYDHPYVDYFKSRLEQCMKVLVK >Mature_276_residues TANTFGTLDILMKHSKEDDLSRFLPKNLLVESPHPEEIPLKSLSFTMSWLPTIHPSWITIAMKEFPPEIQGQLLAWLPEP LVQEILPLLPGISIAPHRCAPFGAFYLLDMLSKKIRPCGITEEIFLPASSANAILYYTGPVKIALINCLGLYSIAKELKH ILDKVVIERVKNALSPTEKLFLTYCQSHPMKHLETTNFLSSWTTDAELRQFVHKQGLEFLGKALTKENASFLWYFLRRLD VGRAYIVEQTLKTWYDHPYVDYFKSRLEQCMKVLVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31822; Mature: 31691
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANTFGTLDILMKHSKEDDLSRFLPKNLLVESPHPEEIPLKSLSFTMSWLPTIHPSWIT CCCCCHHHHHHHHHCCCCHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHE IAMKEFPPEIQGQLLAWLPEPLVQEILPLLPGISIAPHRCAPFGAFYLLDMLSKKIRPCG EEHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC ITEEIFLPASSANAILYYTGPVKIALINCLGLYSIAKELKHILDKVVIERVKNALSPTEK CCHHHEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LFLTYCQSHPMKHLETTNFLSSWTTDAELRQFVHKQGLEFLGKALTKENASFLWYFLRRL HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DVGRAYIVEQTLKTWYDHPYVDYFKSRLEQCMKVLVK HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TANTFGTLDILMKHSKEDDLSRFLPKNLLVESPHPEEIPLKSLSFTMSWLPTIHPSWIT CCCCHHHHHHHHHCCCCHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHE IAMKEFPPEIQGQLLAWLPEPLVQEILPLLPGISIAPHRCAPFGAFYLLDMLSKKIRPCG EEHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC ITEEIFLPASSANAILYYTGPVKIALINCLGLYSIAKELKHILDKVVIERVKNALSPTEK CCHHHEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LFLTYCQSHPMKHLETTNFLSSWTTDAELRQFVHKQGLEFLGKALTKENASFLWYFLRRL HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DVGRAYIVEQTLKTWYDHPYVDYFKSRLEQCMKVLVK HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA