| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is mutL
Identifier: 15836345
GI number: 15836345
Start: 918445
End: 920187
Strand: Direct
Name: mutL
Synonym: CPj0812
Alternate gene names: 15836345
Gene position: 918445-920187 (Clockwise)
Preceding gene: 15836340
Following gene: 15836346
Centisome position: 74.88
GC content: 42.91
Gene sequence:
>1743_bases ATGTCTACAAGAAGGCCTATTCAGTTACTTGACCCCCTGACCATCAATCAAATTGCTGCTGGTGAGGTCATTGAAAACTC CGTTTCTGTTGTTAAAGAACTGATTGAGAATTCCTTAGATGCTGGCGCCGATGAAATAGAAATCGAAACTTTAGGAGGGG GACAAGGCGCAATCATTATCAGAGATAATGGTTGTGGCTTCAGAGCCGAAGACATCCCCATTGCCCTCCAACGTCACGCC ACTTCAAAAATAAGAGAATTCTCTGATATTTTTTCTTTAAATAGCTTTGGCTTTCGAGGCGAGGCTCTACCCTCCATTGC CTCGATTTCTAAAATGGAAATACAATCTTCCATTGAGGGGGACGAGGGTGTACGTACCGTAATTCATGGGGGAGACATCG TTTCTTGTGAGCCCTGTGCTCGGCAACTAGGAACCACAGTGATTGTGAACTCCCTGTTTTATAATGTTCCTGTGCGTCGT GGATTCCAAAAGAGCATGCAATCGGATCGCTTAGGGATTCGCAAGCTGATAGAAAATCGGATTTTATCCACAGCAAACAT AGGGTGGTCCTGGATTAGCGAGGGACATCATGAAATTCAGATTGCTAAGCAGCAAGGATTTCAAGAAAGAGTCGCCTATG TGATGGGAGACCACTTCATGCAGGATGCCCTCACCATAGATAAAGAGGCAAATGGTGTCCGTATTGTAGGGGTGTTAGGG TCTCCCAGCTTCCACCGTCCCACACGTCAAGGACAGAAAATCTTTATTAACGATCGCCCTATAGAGTCTTTATTTATTTC TAAGAAGGTTGGGGACGCCTATGCCTTGCTTCTGCCTCTACACAGGTATCCTGTTTTTGTGCTGAAGCTCTATCTTCCTT CGTCATGGTGTGATTTTAATGTCCACCCACAAAAAATAGAGGCTCGAATTCTTAAGGAAGAACTTGTTGGAGATTGTATC AAAGAAGCTATCGTAGAGACTCTAGCATGTCCTCCTGGCATCTTATGTCGTACGCATCAAGAAATAGAAGAATCTGATTC GGTGCCCTTACCCATGTTTCGTATGTTGGAAACAAGCGATGTGCAAGAAGAAGAGAGTGTAGAGTTTGATCAAAATCTTT TTGCATATAGTTCAGAAGATGTTTCCTTAGAGAAACAAGAATATACATCTAGAGGACCTAAGTCCCAAATGGATTGGATA TATTCTAGCGACGTTCGTTTTTTAACTTCTTTAGGTCGTGTGGTCCTGGCTGAGGATCTTGAGGGTGTGCACATTATTTT TACAGCTGCAGCGCGAAAGCACCTGTTTTTTCTGTCTTTGATGCAAGAGAATTCTCGCATGTATCAATCACAAGCATTAC TGATTCCTCTACGCCTTCAGGTGACTCCTGAGGAGGCTTTTTTCTTCTCTCATCACGGAAGAACGTTATGCGACTTAGGA ATAGAAATATCACAGGTAGGACCTTGTGTTTTCTCTATTGAAAGTACCCCCACTGTCATTGGTGAAGAAGAGCTAAAAGA ATGGTTATTGCTATTGGCAGCAAGGGGCTCTACTGATATAAACTCAGAGGCTTTAACAGCATTGATGAAAGAAACTTTGA CGCAGGCAACGTTTTCTAAACATCAGCATGTTTTTGATGTTTCCTGGCTCAAATTGCTTTGGAGTGTAGGGAAACCTGAA AAAGGATTTGACGGTGCACGAATTCGTCGGTTAATTTTAGACTCTGATTTTATGGAAGGATAA
Upstream 100 bases:
>100_bases CGTTCATTTTTAAGGAAAAATGGAAATTAGACGGAAGCTTTCTTGACATTAGCTTTAGGGTATTTTAATTTGCTGGCTCG GAAATTTAACGAAGGCACCT
Downstream 100 bases:
>100_bases TCATATGTCACACGATCGTATTTTACGTGCTCAAAGAGCCCTCTCAGAACATAATCTTGATGCTATTCTTGTGGAAAAAA GCGAAGATCTTGCTTATTTC
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 580; Mature: 579
Protein sequence:
>580_residues MSTRRPIQLLDPLTINQIAAGEVIENSVSVVKELIENSLDAGADEIEIETLGGGQGAIIIRDNGCGFRAEDIPIALQRHA TSKIREFSDIFSLNSFGFRGEALPSIASISKMEIQSSIEGDEGVRTVIHGGDIVSCEPCARQLGTTVIVNSLFYNVPVRR GFQKSMQSDRLGIRKLIENRILSTANIGWSWISEGHHEIQIAKQQGFQERVAYVMGDHFMQDALTIDKEANGVRIVGVLG SPSFHRPTRQGQKIFINDRPIESLFISKKVGDAYALLLPLHRYPVFVLKLYLPSSWCDFNVHPQKIEARILKEELVGDCI KEAIVETLACPPGILCRTHQEIEESDSVPLPMFRMLETSDVQEEESVEFDQNLFAYSSEDVSLEKQEYTSRGPKSQMDWI YSSDVRFLTSLGRVVLAEDLEGVHIIFTAAARKHLFFLSLMQENSRMYQSQALLIPLRLQVTPEEAFFFSHHGRTLCDLG IEISQVGPCVFSIESTPTVIGEEELKEWLLLLAARGSTDINSEALTALMKETLTQATFSKHQHVFDVSWLKLLWSVGKPE KGFDGARIRRLILDSDFMEG
Sequences:
>Translated_580_residues MSTRRPIQLLDPLTINQIAAGEVIENSVSVVKELIENSLDAGADEIEIETLGGGQGAIIIRDNGCGFRAEDIPIALQRHA TSKIREFSDIFSLNSFGFRGEALPSIASISKMEIQSSIEGDEGVRTVIHGGDIVSCEPCARQLGTTVIVNSLFYNVPVRR GFQKSMQSDRLGIRKLIENRILSTANIGWSWISEGHHEIQIAKQQGFQERVAYVMGDHFMQDALTIDKEANGVRIVGVLG SPSFHRPTRQGQKIFINDRPIESLFISKKVGDAYALLLPLHRYPVFVLKLYLPSSWCDFNVHPQKIEARILKEELVGDCI KEAIVETLACPPGILCRTHQEIEESDSVPLPMFRMLETSDVQEEESVEFDQNLFAYSSEDVSLEKQEYTSRGPKSQMDWI YSSDVRFLTSLGRVVLAEDLEGVHIIFTAAARKHLFFLSLMQENSRMYQSQALLIPLRLQVTPEEAFFFSHHGRTLCDLG IEISQVGPCVFSIESTPTVIGEEELKEWLLLLAARGSTDINSEALTALMKETLTQATFSKHQHVFDVSWLKLLWSVGKPE KGFDGARIRRLILDSDFMEG >Mature_579_residues STRRPIQLLDPLTINQIAAGEVIENSVSVVKELIENSLDAGADEIEIETLGGGQGAIIIRDNGCGFRAEDIPIALQRHAT SKIREFSDIFSLNSFGFRGEALPSIASISKMEIQSSIEGDEGVRTVIHGGDIVSCEPCARQLGTTVIVNSLFYNVPVRRG FQKSMQSDRLGIRKLIENRILSTANIGWSWISEGHHEIQIAKQQGFQERVAYVMGDHFMQDALTIDKEANGVRIVGVLGS PSFHRPTRQGQKIFINDRPIESLFISKKVGDAYALLLPLHRYPVFVLKLYLPSSWCDFNVHPQKIEARILKEELVGDCIK EAIVETLACPPGILCRTHQEIEESDSVPLPMFRMLETSDVQEEESVEFDQNLFAYSSEDVSLEKQEYTSRGPKSQMDWIY SSDVRFLTSLGRVVLAEDLEGVHIIFTAAARKHLFFLSLMQENSRMYQSQALLIPLRLQVTPEEAFFFSHHGRTLCDLGI EISQVGPCVFSIESTPTVIGEEELKEWLLLLAARGSTDINSEALTALMKETLTQATFSKHQHVFDVSWLKLLWSVGKPEK GFDGARIRRLILDSDFMEG
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=328, Percent_Identity=30.4878048780488, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI4505913, Length=349, Percent_Identity=28.9398280802292, Blast_Score=137, Evalue=4e-32, Organism=Homo sapiens, GI310128478, Length=349, Percent_Identity=29.2263610315186, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI4505911, Length=335, Percent_Identity=30.7462686567164, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI189458898, Length=335, Percent_Identity=30.7462686567164, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI189458896, Length=316, Percent_Identity=31.9620253164557, Blast_Score=127, Evalue=4e-29, Organism=Homo sapiens, GI310128480, Length=300, Percent_Identity=27.6666666666667, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI91992160, Length=259, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=8e-12, Organism=Homo sapiens, GI263191589, Length=234, Percent_Identity=24.3589743589744, Blast_Score=70, Evalue=8e-12, Organism=Homo sapiens, GI91992162, Length=259, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1790612, Length=552, Percent_Identity=29.8913043478261, Blast_Score=196, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17562796, Length=350, Percent_Identity=27.4285714285714, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI71991825, Length=321, Percent_Identity=25.8566978193146, Blast_Score=117, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323819, Length=322, Percent_Identity=29.1925465838509, Blast_Score=150, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6324247, Length=380, Percent_Identity=26.5789473684211, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6325093, Length=332, Percent_Identity=24.3975903614458, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI17136968, Length=323, Percent_Identity=30.030959752322, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI17136970, Length=376, Percent_Identity=28.1914893617021, Blast_Score=120, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_CHLPN (Q9Z794)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: A72032 - PIR: B86592 - RefSeq: NP_225007.1 - RefSeq: NP_300869.1 - RefSeq: NP_445596.1 - RefSeq: NP_877113.1 - ProteinModelPortal: Q9Z794 - GeneID: 1467520 - GeneID: 894840 - GeneID: 919584 - GeneID: 963542 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP1059 - KEGG: cpn:CPn0812 - KEGG: cpt:CpB0841 - TIGR: CP_1059 - HOGENOM: HBG414122 - OMA: RRGFQKS - ProtClustDB: PRK00095 - BioCyc: CPNE115711:CP_1059-MONOMER - BioCyc: CPNE115713:CPN0812-MONOMER - BioCyc: CPNE138677:CPJ0812-MONOMER - BioCyc: CPNE182082:CPB0841-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 65002; Mature: 64871
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRRPIQLLDPLTINQIAAGEVIENSVSVVKELIENSLDAGADEIEIETLGGGQGAIII CCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEE RDNGCGFRAEDIPIALQRHATSKIREFSDIFSLNSFGFRGEALPSIASISKMEIQSSIEG EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC DEGVRTVIHGGDIVSCEPCARQLGTTVIVNSLFYNVPVRRGFQKSMQSDRLGIRKLIENR CCCCEEEEECCCEEECCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ILSTANIGWSWISEGHHEIQIAKQQGFQERVAYVMGDHFMQDALTIDKEANGVRIVGVLG HHHHCCCCHHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC SPSFHRPTRQGQKIFINDRPIESLFISKKVGDAYALLLPLHRYPVFVLKLYLPSSWCDFN CCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEHHHHHCCEEEEEEECCCCCCCCC VHPQKIEARILKEELVGDCIKEAIVETLACPPGILCRTHQEIEESDSVPLPMFRMLETSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHCC VQEEESVEFDQNLFAYSSEDVSLEKQEYTSRGPKSQMDWIYSSDVRFLTSLGRVVLAEDL CCCHHCCCHHCHHEEECCCCCCCCHHHHHCCCCCCHHCEECCCCHHHHHHHCHHEEECCC EGVHIIFTAAARKHLFFLSLMQENSRMYQSQALLIPLRLQVTPEEAFFFSHHGRTLCDLG CCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHEEEECCCCEEECCC IEISQVGPCVFSIESTPTVIGEEELKEWLLLLAARGSTDINSEALTALMKETLTQATFSK CCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH HQHVFDVSWLKLLWSVGKPEKGFDGARIRRLILDSDFMEG CCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure STRRPIQLLDPLTINQIAAGEVIENSVSVVKELIENSLDAGADEIEIETLGGGQGAIII CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEE RDNGCGFRAEDIPIALQRHATSKIREFSDIFSLNSFGFRGEALPSIASISKMEIQSSIEG EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC DEGVRTVIHGGDIVSCEPCARQLGTTVIVNSLFYNVPVRRGFQKSMQSDRLGIRKLIENR CCCCEEEEECCCEEECCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ILSTANIGWSWISEGHHEIQIAKQQGFQERVAYVMGDHFMQDALTIDKEANGVRIVGVLG HHHHCCCCHHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC SPSFHRPTRQGQKIFINDRPIESLFISKKVGDAYALLLPLHRYPVFVLKLYLPSSWCDFN CCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEHHHHHCCEEEEEEECCCCCCCCC VHPQKIEARILKEELVGDCIKEAIVETLACPPGILCRTHQEIEESDSVPLPMFRMLETSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHCC VQEEESVEFDQNLFAYSSEDVSLEKQEYTSRGPKSQMDWIYSSDVRFLTSLGRVVLAEDL CCCHHCCCHHCHHEEECCCCCCCCHHHHHCCCCCCHHCEECCCCHHHHHHHCHHEEECCC EGVHIIFTAAARKHLFFLSLMQENSRMYQSQALLIPLRLQVTPEEAFFFSHHGRTLCDLG CCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHEEEECCCCEEECCC IEISQVGPCVFSIESTPTVIGEEELKEWLLLLAARGSTDINSEALTALMKETLTQATFSK CCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH HQHVFDVSWLKLLWSVGKPEKGFDGARIRRLILDSDFMEG CCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362