| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836259
GI number: 15836259
Start: 812898
End: 815516
Strand: Direct
Name: Not Available
Synonym: CPj0727
Alternate gene names: NA
Gene position: 812898-815516 (Clockwise)
Preceding gene: 15836255
Following gene: 15836263
Centisome position: 66.27
GC content: 39.44
Gene sequence:
>2619_bases ATGTCTACCTTTTCTATCCAAAATCGACTAAGAACCATTTCAGGTGAAAGTACTCGAATCATCAAGCTGGACCATAAGTA CTCTGGTTTTGATCCCAGATCAGTGCCTGCGATAAATTTAGAAGAGTTAAATTCAGGGATTTATGCTCTAAGGCATTTAA TGAACGCCCTGCAATCAGAAAATACCAATGTTGCTGCTTTATTAAACCCAAACAATACGATCTTCCCCACAACATCTTGG ACAGATTACAAGCATTCGCGTCCGCAAGCTAGCTCTCCAAGAGCACCCTCATCACAAACTCCCACAGATATCGTATCAGC AGCAGCTCTTGCTTTAGTTCTTGTTATTGACGGAGGTCTAGCGGAATTAGTGGCCTCCGTTACAGAAATTGATCTCGGAG CTTTATCCACTATATCCACAGTTCGTCAGTTAATGGCGAGCTACCTCGGTTTGACAACTCTAACAGCTGAACAAGAAAAG GTTGTATTTTCCAGCTCCTATGTTCCTTCAGAAAAAAATCTCCTTGAACATGTAAAACAAGAAAAAGCTGCTGAAATCCA AGCTAAGCAAGAAGAAATAAAAGCAGTATTAGAAGCTAAAGGAGTCTCTACTGAAGAGATCGAAGCGATACTTAAGGAAT ATCCTGATATCTATGCAGCAGATTTCTTCAAAGAGTTTATAGAAGAGCCTTTACATACATATCGTGCAAAAGTCGGTGCA CCGATCCAAGAGATGAATGAGAACGCGATTCAGCTGCTTCCTACACCTCCTGCGATCACTCCTGACAATGTCAATGAAGT CAACGGAATGAACACCCTCAGCACTATTTTACAAGCTATAGATGATGCTATTAAACAAGCTCCTGCACTTGGTGGGGATC AGGAAATCATTACTATACTACAAACTTTGGTTCCCCTAGTCGATAAGACCACGTTTACAAAAGCTGAATTCGATCTTATT TACACAGCAACACAACTTCCTAATACAGCATCTTTAAAACTCTACCTTACGGATAGACAAATTGCTGAGTATCGAGGGAA AATCACGAAAGTATATCAAAATTCTATCCAAAATCTCTCTGAGACAAAACGTGTAGTTGAAAACAACCGAAGCATGCTAG AAACACAACTCTCCATGTTCCAACAAGCACAAAATTGCTTTGTTACTTGGATTAGTCAAGCCAATGCACTTAACATAGCC ATCACTAATAAATATATTTCTGCTGTACTTACGACTTCTATGGAGATGTACGGAGGTCTCCTTTGCCTTTCTTATATGTA CGAAAGGTTAGCCGATGATGAAAAAGCAATTTTTGACAAAAGTGTGAATGAGTATTTACCGATTCACATCGTTGTTGGTG GTTCATGGGTAAATGGCTGGATAGCAAAAATGGCAGCCTATCAAGAACTCGCGGAATACTCTTTAGGAACCGCAGTTACA AGTCAAGATCAAATCAAAGCTTATTTACAAACACGAGGGAATGAGTTTAAAGCTACGCGTCATTTTTTCCATAATATTGG GGATCAAATGTACCAATTTGCTAATGAGACTGTCTTTGGAAATTGTCTTACAACAGCAAATGGTGCGATACAGCCCGATT TAGGTGGTTTTATCAGAGAAGCAATGACGAATGTTGGAACTGTTGAAGCCGATTATGTAAGCAATGCTCAGAGGATCCTA AATGAATTTAATACGGCTGCAACTGCGCATGTTTTACAATTACAATTACAAATAGCTGAGTTACAAAAGAAAGCAGATGA CTTAGACCCAGGAAAAGCCTCTTTCACTGAGAACCGTAAATTTGCTGTTGCTGCTTGGATCACATCGGAGAGCTTAGGAG ATGCTTTAATTTCTATGATTTTAAACTCTCAGCTACCAAAGCAAGAGGCTTTTTTAAAACCTTTGATCGAAGAAATTAAC TTCAATAACCTCGCAGCGAATGCCTTAAACAGCTTGCTACAGATTACCAATGAATTTTCTACGACTTCTGTCTACTATAG CCTCTCTTCCTATTTAGTTCAGAGTAAAACTGGACAAAACCTGTTTGCTGGTGATTACTATGAAACACTTCTAGCTGCAG CTAGAGAACGGGAGTATATTTATCGCGACACTGCGAGATGTAAACAAGCGATTAATCTAGTCAATGGACTTCTCCAAAAA ATTAACTCTCTTCCAGGGGCTACCTCAGCACATAAACAAGAAATGCTTAACGCAACTACCTATTATCAATACAGCTTATC AGTCACTTTAAACCAACTTACTGTATTAGAATCTTTACTCGCGGGTCTCAAAATGACTCTTCAGACAACTAGTAATAACA AATACGACAAAAGTGTGTTTAAAATTGAAAGTTTTGATGACTGGATTCCAACTCTAGCTGCTTTGGAAAGTTTTCTAACT AGTGGATTCCCTAATATCAGTGCGACAGGAGGCCTAGGTCCTTTATTTACCCAGGTGCAATCCGATCAGCAAACGTATAC TTCTCAAGGCCAGACACAGCAGTTGAACCTACAAAACCAAATGACCACTATCCAACAGGAGTGGACATTAGTTTCCACAT CCATGCAAGTATTAAACGGTATTTTATCACAGCTTGCTGGTGCCATCTATTCCAACTAA
Upstream 100 bases:
>100_bases TATCAATATTATAGAAAACAAATTATTTTTTATTTGAAAAGCTTCATAGAAAAAAACAAAACAAAGTACGAAAATAAAAT AAAAATATTATTTATTTTCT
Downstream 100 bases:
>100_bases TTGCATCCTTAGGAGTTTTTAGAGCTCCTAAAGGATCTTTTCTTCTCCTTTACCCTATACTTTTTCTTTATCCATCTGCA GCTTAGAAAGAACATCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 872; Mature: 871
Protein sequence:
>872_residues MSTFSIQNRLRTISGESTRIIKLDHKYSGFDPRSVPAINLEELNSGIYALRHLMNALQSENTNVAALLNPNNTIFPTTSW TDYKHSRPQASSPRAPSSQTPTDIVSAAALALVLVIDGGLAELVASVTEIDLGALSTISTVRQLMASYLGLTTLTAEQEK VVFSSSYVPSEKNLLEHVKQEKAAEIQAKQEEIKAVLEAKGVSTEEIEAILKEYPDIYAADFFKEFIEEPLHTYRAKVGA PIQEMNENAIQLLPTPPAITPDNVNEVNGMNTLSTILQAIDDAIKQAPALGGDQEIITILQTLVPLVDKTTFTKAEFDLI YTATQLPNTASLKLYLTDRQIAEYRGKITKVYQNSIQNLSETKRVVENNRSMLETQLSMFQQAQNCFVTWISQANALNIA ITNKYISAVLTTSMEMYGGLLCLSYMYERLADDEKAIFDKSVNEYLPIHIVVGGSWVNGWIAKMAAYQELAEYSLGTAVT SQDQIKAYLQTRGNEFKATRHFFHNIGDQMYQFANETVFGNCLTTANGAIQPDLGGFIREAMTNVGTVEADYVSNAQRIL NEFNTAATAHVLQLQLQIAELQKKADDLDPGKASFTENRKFAVAAWITSESLGDALISMILNSQLPKQEAFLKPLIEEIN FNNLAANALNSLLQITNEFSTTSVYYSLSSYLVQSKTGQNLFAGDYYETLLAAAREREYIYRDTARCKQAINLVNGLLQK INSLPGATSAHKQEMLNATTYYQYSLSVTLNQLTVLESLLAGLKMTLQTTSNNKYDKSVFKIESFDDWIPTLAALESFLT SGFPNISATGGLGPLFTQVQSDQQTYTSQGQTQQLNLQNQMTTIQQEWTLVSTSMQVLNGILSQLAGAIYSN
Sequences:
>Translated_872_residues MSTFSIQNRLRTISGESTRIIKLDHKYSGFDPRSVPAINLEELNSGIYALRHLMNALQSENTNVAALLNPNNTIFPTTSW TDYKHSRPQASSPRAPSSQTPTDIVSAAALALVLVIDGGLAELVASVTEIDLGALSTISTVRQLMASYLGLTTLTAEQEK VVFSSSYVPSEKNLLEHVKQEKAAEIQAKQEEIKAVLEAKGVSTEEIEAILKEYPDIYAADFFKEFIEEPLHTYRAKVGA PIQEMNENAIQLLPTPPAITPDNVNEVNGMNTLSTILQAIDDAIKQAPALGGDQEIITILQTLVPLVDKTTFTKAEFDLI YTATQLPNTASLKLYLTDRQIAEYRGKITKVYQNSIQNLSETKRVVENNRSMLETQLSMFQQAQNCFVTWISQANALNIA ITNKYISAVLTTSMEMYGGLLCLSYMYERLADDEKAIFDKSVNEYLPIHIVVGGSWVNGWIAKMAAYQELAEYSLGTAVT SQDQIKAYLQTRGNEFKATRHFFHNIGDQMYQFANETVFGNCLTTANGAIQPDLGGFIREAMTNVGTVEADYVSNAQRIL NEFNTAATAHVLQLQLQIAELQKKADDLDPGKASFTENRKFAVAAWITSESLGDALISMILNSQLPKQEAFLKPLIEEIN FNNLAANALNSLLQITNEFSTTSVYYSLSSYLVQSKTGQNLFAGDYYETLLAAAREREYIYRDTARCKQAINLVNGLLQK INSLPGATSAHKQEMLNATTYYQYSLSVTLNQLTVLESLLAGLKMTLQTTSNNKYDKSVFKIESFDDWIPTLAALESFLT SGFPNISATGGLGPLFTQVQSDQQTYTSQGQTQQLNLQNQMTTIQQEWTLVSTSMQVLNGILSQLAGAIYSN >Mature_871_residues STFSIQNRLRTISGESTRIIKLDHKYSGFDPRSVPAINLEELNSGIYALRHLMNALQSENTNVAALLNPNNTIFPTTSWT DYKHSRPQASSPRAPSSQTPTDIVSAAALALVLVIDGGLAELVASVTEIDLGALSTISTVRQLMASYLGLTTLTAEQEKV VFSSSYVPSEKNLLEHVKQEKAAEIQAKQEEIKAVLEAKGVSTEEIEAILKEYPDIYAADFFKEFIEEPLHTYRAKVGAP IQEMNENAIQLLPTPPAITPDNVNEVNGMNTLSTILQAIDDAIKQAPALGGDQEIITILQTLVPLVDKTTFTKAEFDLIY TATQLPNTASLKLYLTDRQIAEYRGKITKVYQNSIQNLSETKRVVENNRSMLETQLSMFQQAQNCFVTWISQANALNIAI TNKYISAVLTTSMEMYGGLLCLSYMYERLADDEKAIFDKSVNEYLPIHIVVGGSWVNGWIAKMAAYQELAEYSLGTAVTS QDQIKAYLQTRGNEFKATRHFFHNIGDQMYQFANETVFGNCLTTANGAIQPDLGGFIREAMTNVGTVEADYVSNAQRILN EFNTAATAHVLQLQLQIAELQKKADDLDPGKASFTENRKFAVAAWITSESLGDALISMILNSQLPKQEAFLKPLIEEINF NNLAANALNSLLQITNEFSTTSVYYSLSSYLVQSKTGQNLFAGDYYETLLAAAREREYIYRDTARCKQAINLVNGLLQKI NSLPGATSAHKQEMLNATTYYQYSLSVTLNQLTVLESLLAGLKMTLQTTSNNKYDKSVFKIESFDDWIPTLAALESFLTS GFPNISATGGLGPLFTQVQSDQQTYTSQGQTQQLNLQNQMTTIQQEWTLVSTSMQVLNGILSQLAGAIYSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96452; Mature: 96321
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFSIQNRLRTISGESTRIIKLDHKYSGFDPRSVPAINLEELNSGIYALRHLMNALQSE CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC NTNVAALLNPNNTIFPTTSWTDYKHSRPQASSPRAPSSQTPTDIVSAAALALVLVIDGGL CCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH AELVASVTEIDLGALSTISTVRQLMASYLGLTTLTAEQEKVVFSSSYVPSEKNLLEHVKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHEEEECCCCCCHHHHHHHHHH EKAAEIQAKQEEIKAVLEAKGVSTEEIEAILKEYPDIYAADFFKEFIEEPLHTYRAKVGA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC PIQEMNENAIQLLPTPPAITPDNVNEVNGMNTLSTILQAIDDAIKQAPALGGDQEIITIL CHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH QTLVPLVDKTTFTKAEFDLIYTATQLPNTASLKLYLTDRQIAEYRGKITKVYQNSIQNLS HHHHHHHCCCCCCCHHHEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHH ETKRVVENNRSMLETQLSMFQQAQNCFVTWISQANALNIAITNKYISAVLTTSMEMYGGL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHH LCLSYMYERLADDEKAIFDKSVNEYLPIHIVVGGSWVNGWIAKMAAYQELAEYSLGTAVT HHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC SQDQIKAYLQTRGNEFKATRHFFHNIGDQMYQFANETVFGNCLTTANGAIQPDLGGFIRE CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH AMTNVGTVEADYVSNAQRILNEFNTAATAHVLQLQLQIAELQKKADDLDPGKASFTENRK HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC FAVAAWITSESLGDALISMILNSQLPKQEAFLKPLIEEINFNNLAANALNSLLQITNEFS EEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC TTSVYYSLSSYLVQSKTGQNLFAGDYYETLLAAAREREYIYRDTARCKQAINLVNGLLQK HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INSLPGATSAHKQEMLNATTYYQYSLSVTLNQLTVLESLLAGLKMTLQTTSNNKYDKSVF HHCCCCCCHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHE KIESFDDWIPTLAALESFLTSGFPNISATGGLGPLFTQVQSDQQTYTSQGQTQQLNLQNQ EECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECHHHH MTTIQQEWTLVSTSMQVLNGILSQLAGAIYSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STFSIQNRLRTISGESTRIIKLDHKYSGFDPRSVPAINLEELNSGIYALRHLMNALQSE CCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC NTNVAALLNPNNTIFPTTSWTDYKHSRPQASSPRAPSSQTPTDIVSAAALALVLVIDGGL CCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH AELVASVTEIDLGALSTISTVRQLMASYLGLTTLTAEQEKVVFSSSYVPSEKNLLEHVKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHEEEECCCCCCHHHHHHHHHH EKAAEIQAKQEEIKAVLEAKGVSTEEIEAILKEYPDIYAADFFKEFIEEPLHTYRAKVGA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC PIQEMNENAIQLLPTPPAITPDNVNEVNGMNTLSTILQAIDDAIKQAPALGGDQEIITIL CHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH QTLVPLVDKTTFTKAEFDLIYTATQLPNTASLKLYLTDRQIAEYRGKITKVYQNSIQNLS HHHHHHHCCCCCCCHHHEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHH ETKRVVENNRSMLETQLSMFQQAQNCFVTWISQANALNIAITNKYISAVLTTSMEMYGGL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHH LCLSYMYERLADDEKAIFDKSVNEYLPIHIVVGGSWVNGWIAKMAAYQELAEYSLGTAVT HHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC SQDQIKAYLQTRGNEFKATRHFFHNIGDQMYQFANETVFGNCLTTANGAIQPDLGGFIRE CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH AMTNVGTVEADYVSNAQRILNEFNTAATAHVLQLQLQIAELQKKADDLDPGKASFTENRK HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC FAVAAWITSESLGDALISMILNSQLPKQEAFLKPLIEEINFNNLAANALNSLLQITNEFS EEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC TTSVYYSLSSYLVQSKTGQNLFAGDYYETLLAAAREREYIYRDTARCKQAINLVNGLLQK HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INSLPGATSAHKQEMLNATTYYQYSLSVTLNQLTVLESLLAGLKMTLQTTSNNKYDKSVF HHCCCCCCHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHE KIESFDDWIPTLAALESFLTSGFPNISATGGLGPLFTQVQSDQQTYTSQGQTQQLNLQNQ EECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECHHHH MTTIQQEWTLVSTSMQVLNGILSQLAGAIYSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA