| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is rsbW
Identifier: 15836202
GI number: 15836202
Start: 752087
End: 752521
Strand: Direct
Name: rsbW
Synonym: CPj0670
Alternate gene names: NA
Gene position: 752087-752521 (Clockwise)
Preceding gene: 15836201
Following gene: 15836204
Centisome position: 61.32
GC content: 40.69
Gene sequence:
>435_bases ATGACCTTTTTTGAAGGAGAAACCGTTTTTCCTGCAGTACTTAGTGAACTTCATAGCATGTTGGACTTAATCAAACGTGC AGGAAAACAATCTAAGTGCCCCCAAGAGAAGTTGTTAAAGCTCGAGCTTGCTTGTGAGGAGCTTCTCGTCAATATCATTT CTTATGCTTATCAGGGCGAAAATTCTCCAGGAACGATTGCGATTTCTTGCATCTCCCATAGAGGAGACTTAGAAGTTGTG ATTAAAGACCATGGACCTTCTTTCAATCCTCTTGCTGTTTCAATCAACATTCAGGAAGATCTTCCCTTAGAACAGCGTAA ACTCGGGGGCTTAGGGATTTTTCTGGCTAAAAGTTCTGTGGACGAGTTTCTTTATGCTCGTGAAGATCATTGCAATATTG TGCATTTAAAAATGCTCAATGGCCAACATTCCTAA
Upstream 100 bases:
>100_bases TTTGCTTTAGGCCAATTTGAAATGCATAGTGAAGCCATAAAAAGTGCTCGCCGTATACTATCTATACGCCTAGCCGAGAC GATTGCTCAACAGGTATACT
Downstream 100 bases:
>100_bases ACCTAGTGATCGTTATTAAAGCGGAAAGAACGCAGAGCATTTTCAGTATCTTTAATATCCTTAAGATATAACTGCAGGGC TTCGAGAATCAGCGACGACT
Product: sigma regulatory factor-histidine kinase
Products: NA
Alternate protein names: Sigma Regulatory Factor-Histidine Kinase; Regulator Of Sigma Subunit-Histidine Kinase
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTFFEGETVFPAVLSELHSMLDLIKRAGKQSKCPQEKLLKLELACEELLVNIISYAYQGENSPGTIAISCISHRGDLEVV IKDHGPSFNPLAVSINIQEDLPLEQRKLGGLGIFLAKSSVDEFLYAREDHCNIVHLKMLNGQHS
Sequences:
>Translated_144_residues MTFFEGETVFPAVLSELHSMLDLIKRAGKQSKCPQEKLLKLELACEELLVNIISYAYQGENSPGTIAISCISHRGDLEVV IKDHGPSFNPLAVSINIQEDLPLEQRKLGGLGIFLAKSSVDEFLYAREDHCNIVHLKMLNGQHS >Mature_143_residues TFFEGETVFPAVLSELHSMLDLIKRAGKQSKCPQEKLLKLELACEELLVNIISYAYQGENSPGTIAISCISHRGDLEVVI KDHGPSFNPLAVSINIQEDLPLEQRKLGGLGIFLAKSSVDEFLYAREDHCNIVHLKMLNGQHS
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15992; Mature: 15860
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFFEGETVFPAVLSELHSMLDLIKRAGKQSKCPQEKLLKLELACEELLVNIISYAYQGE CCEECCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC NSPGTIAISCISHRGDLEVVIKDHGPSFNPLAVSINIQEDLPLEQRKLGGLGIFLAKSSV CCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHCCCEEEEEECCCH DEFLYAREDHCNIVHLKMLNGQHS HHHHHCCCCCCCEEEEEECCCCCC >Mature Secondary Structure TFFEGETVFPAVLSELHSMLDLIKRAGKQSKCPQEKLLKLELACEELLVNIISYAYQGE CEECCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC NSPGTIAISCISHRGDLEVVIKDHGPSFNPLAVSINIQEDLPLEQRKLGGLGIFLAKSSV CCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHCCCEEEEEECCCH DEFLYAREDHCNIVHLKMLNGQHS HHHHHCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA