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The map label for this gene is yidD

Identifier: 15836124

GI number: 15836124

Start: 680474

End: 680785

Strand: Direct

Name: yidD

Synonym: CPj0592

Alternate gene names: 15836124

Gene position: 680474-680785 (Clockwise)

Preceding gene: 15836123

Following gene: 15836126

Centisome position: 55.48

GC content: 44.23

Gene sequence:

>312_bases
ATGTCATTTAAACGTTTCTTGCAACAGATCCCTGTACGTATCTGTCTACTTATTATCTATCTCTACCAATGGCTTATCTC
CCCTCTCTTAGGCTCGTGCTGTAGATTTTTTCCTTCCTGTTCGCACTATGCAGAACAAGCCTTAAAATCTCACGGCTTCC
TGATGGGCTGCTGGCTTTCTATAAAGAGAATCGGAAAGTGTGGCCCCTGGCATCCTGGAGGCATTGACATGGTCCCTAAG
ACTGCTTTGCAGGAAGTTTTAGAACCTTACCAGGAAATAGACGGTGGTGATTCAAGCCATTTTTCTGAATGA

Upstream 100 bases:

>100_bases
AACGACCAACTCAATCACCAACACTCTTCATCTCTAGAGTGGACAATCATATGGCTGATTATGTTAGAATTTTCTGTAGC
TCTACTCAAAGATGTTTTCA

Downstream 100 bases:

>100_bases
TCTTATCCATAGGAATGCCAAACCTCTTAGCTATCAACCATAAAGAATCCCCGTCCTGTACCACATACTCTTCATCCTGA
TCTTCTTGAACACGAGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSFKRFLQQIPVRICLLIIYLYQWLISPLLGSCCRFFPSCSHYAEQALKSHGFLMGCWLSIKRIGKCGPWHPGGIDMVPK
TALQEVLEPYQEIDGGDSSHFSE

Sequences:

>Translated_103_residues
MSFKRFLQQIPVRICLLIIYLYQWLISPLLGSCCRFFPSCSHYAEQALKSHGFLMGCWLSIKRIGKCGPWHPGGIDMVPK
TALQEVLEPYQEIDGGDSSHFSE
>Mature_102_residues
SFKRFLQQIPVRICLLIIYLYQWLISPLLGSCCRFFPSCSHYAEQALKSHGFLMGCWLSIKRIGKCGPWHPGGIDMVPKT
ALQEVLEPYQEIDGGDSSHFSE

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=67, Percent_Identity=53.7313432835821, Blast_Score=79, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y592_CHLPN (Q9Z7W2)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   E81606
- PIR:   E86564
- PIR:   H72060
- RefSeq:   NP_224788.1
- RefSeq:   NP_300648.1
- RefSeq:   NP_444708.1
- RefSeq:   NP_876888.1
- GeneID:   1467295
- GeneID:   895330
- GeneID:   919355
- GeneID:   962967
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0156
- KEGG:   cpj:CPj0592
- KEGG:   cpn:CPn0592
- KEGG:   cpt:CpB0617
- TIGR:   CP_0156
- HOGENOM:   HBG634291
- OMA:   QIDSESA
- ProtClustDB:   PRK14381
- BioCyc:   CPNE115711:CP_0156-MONOMER
- BioCyc:   CPNE115713:CPN0592-MONOMER
- BioCyc:   CPNE138677:CPJ0592-MONOMER
- BioCyc:   CPNE182082:CPB0617-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 11751; Mature: 11620

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKRFLQQIPVRICLLIIYLYQWLISPLLGSCCRFFPSCSHYAEQALKSHGFLMGCWLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
IKRIGKCGPWHPGGIDMVPKTALQEVLEPYQEIDGGDSSHFSE
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SFKRFLQQIPVRICLLIIYLYQWLISPLLGSCCRFFPSCSHYAEQALKSHGFLMGCWLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
IKRIGKCGPWHPGGIDMVPKTALQEVLEPYQEIDGGDSSHFSE
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362